BLASTX nr result

ID: Akebia25_contig00044418 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00044418
         (295 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...    60   2e-07
emb|CBI27903.3| unnamed protein product [Vitis vinifera]               60   2e-07

>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 884

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/75 (44%), Positives = 43/75 (57%)
 Frame = -3

Query: 269 LVFQTRENYPNSFRTLKLKSYCSCQTIEVENEEPQRTKVVYXXXXXXXXXXPSFHDIVRD 90
           L+ Q + +Y N+FRTLK    CS  +I+V+    Q+ KV            PSF + +RD
Sbjct: 14  LLLQPQAHYSNTFRTLKFNCSCSYHSIQVDT---QQVKVPLKTTKAKRKPRPSFFEQIRD 70

Query: 89  KWSLKIGSQRLKFPW 45
           KWSLKI S R KFPW
Sbjct: 71  KWSLKINSPREKFPW 85


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/75 (44%), Positives = 43/75 (57%)
 Frame = -3

Query: 269 LVFQTRENYPNSFRTLKLKSYCSCQTIEVENEEPQRTKVVYXXXXXXXXXXPSFHDIVRD 90
           L+ Q + +Y N+FRTLK    CS  +I+V+    Q+ KV            PSF + +RD
Sbjct: 56  LLLQPQAHYSNTFRTLKFNCSCSYHSIQVDT---QQVKVPLKTTKAKRKPRPSFFEQIRD 112

Query: 89  KWSLKIGSQRLKFPW 45
           KWSLKI S R KFPW
Sbjct: 113 KWSLKINSPREKFPW 127


Top