BLASTX nr result
ID: Akebia25_contig00043448
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00043448
(769 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCH50966.1| T4.5 [Malus x robusta] 117 1e-54
gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subc... 120 4e-51
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 116 9e-50
gb|AAB82754.1| retrofit [Oryza longistaminata] 116 2e-49
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 117 6e-49
gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa] 125 1e-48
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 117 2e-48
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 114 2e-48
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 119 2e-48
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 115 3e-48
gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indi... 115 3e-48
gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor] 113 5e-48
emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera] 113 8e-48
ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [S... 110 8e-48
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 114 1e-47
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 119 1e-47
gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-... 119 1e-47
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 113 2e-47
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 113 2e-47
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695... 120 2e-47
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 117 bits (293), Expect(3) = 1e-54
Identities = 58/101 (57%), Positives = 73/101 (72%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TVARSSTE+EY++LA T E+TWV L D+ P+ P I+CDN S I+LA NP
Sbjct: 1532 KKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIYCDNKSVIALAFNPV 1591
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 625
FHARTKH+E+ YHYIREKV+ + V HV++L ADIFTK
Sbjct: 1592 FHARTKHVEIDYHYIREKVLLGHIGVQHVASLLQIADIFTK 1632
Score = 75.5 bits (184), Expect(3) = 1e-54
Identities = 35/54 (64%), Positives = 40/54 (74%)
Frame = +3
Query: 168 IKGTIQYGLHFTSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
+KGT+ GL FT G+ A+SDADWAG VDR+S SGYCVFLG N I WSAKK
Sbjct: 1480 LKGTVDLGLWFTKGSQCLTAWSDADWAGCPVDRRSTSGYCVFLGSNLISWSAKK 1533
Score = 68.9 bits (167), Expect(3) = 1e-54
Identities = 34/49 (69%), Positives = 37/49 (75%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRS V ALQYLT TRPD+A+AVN VCQYMH+P H AVK ILR
Sbjct: 1430 DPTSYRSTVGALQYLTWTRPDLAFAVNQVCQYMHSPQTIHLQAVKRILR 1478
>gb|AAP53968.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 932
Score = 120 bits (302), Expect(3) = 4e-51
Identities = 58/103 (56%), Positives = 76/103 (73%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSSTE+EYKALA TTE+TWV L +L I P V Q+WCDN+ A L++NP
Sbjct: 815 RKQATVSRSSTEAEYKALANATTEVTWVRKILDELRIARPSVAQLWCDNLGATYLSANPV 874
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIE+ YH++RE+V KK L + +ST + AD FTK++
Sbjct: 875 FHARTKHIEIDYHFVREQVAKKLLDIQFISTTDQLADGFTKSL 917
Score = 65.1 bits (157), Expect(3) = 4e-51
Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
IKGT+++GL F S ++ +A+SDADWAG S DR+S G+ VFLG N I WSA+K
Sbjct: 762 IKGTVEFGLRFGKSDSMLISAFSDADWAGCSDDRRSTGGFAVFLGPNLISWSARK 816
Score = 63.9 bits (154), Expect(3) = 4e-51
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D + YRSIV ALQYLT+TR D+++ VN VCQ++H+P H++AVK ILR
Sbjct: 712 DASHYRSIVGALQYLTLTRSDLSFLVNKVCQFLHSPTTVHWSAVKRILR 760
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 116 bits (291), Expect(3) = 9e-50
Identities = 56/101 (55%), Positives = 73/101 (72%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K PTV+RSSTESEYKALA T EL WV + L ++ I P ++WCDN+ A L++NP
Sbjct: 1194 RKQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLWCDNLGAKYLSANPI 1253
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 625
FHARTKHIEV YH++R++V KK L + +V T + AD FTK
Sbjct: 1254 FHARTKHIEVDYHFVRDRVAKKLLDIEYVPTGDQVADGFTK 1294
Score = 73.6 bits (179), Expect(3) = 9e-50
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D+T YRSIV ALQYLT+TRPDIA++VN VCQ++HAP H+ AVK ILR
Sbjct: 1091 DITQYRSIVGALQYLTLTRPDIAFSVNKVCQFLHAPTTLHWAAVKRILR 1139
Score = 55.1 bits (131), Expect(3) = 9e-50
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
IK GLH S + +A+SDADWAG DRKS G+ VFLG N + WSA+K
Sbjct: 1141 IKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGGFAVFLGSNLVSWSARK 1195
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 116 bits (291), Expect(3) = 2e-49
Identities = 57/103 (55%), Positives = 76/103 (73%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K PTV+RSSTE+EYKA+A TT EL WV L++L I P +IWCDN+ A L++NP
Sbjct: 1326 RKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPV 1385
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV YH++RE+V +K L++ V + + AD FTKA+
Sbjct: 1386 FHARTKHIEVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKAL 1428
Score = 73.6 bits (179), Expect(3) = 2e-49
Identities = 35/49 (71%), Positives = 40/49 (81%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D YRSIV ALQYLT+TRPDIAY+VN VCQ++HAP SH+ AVK ILR
Sbjct: 1223 DAIQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILR 1271
Score = 53.9 bits (128), Expect(3) = 2e-49
Identities = 26/48 (54%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 189 GLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
GLH S + + YSDADWAG DRKS G+ VFLG N + WSA+K
Sbjct: 1280 GLHIHKSASTLVHGYSDADWAGSIDDRKSTGGFAVFLGSNLVSWSARK 1327
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 117 bits (293), Expect(3) = 6e-49
Identities = 53/103 (51%), Positives = 76/103 (73%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSSTE+EYKALA T E+ WV L++L + P ++WCDN+ A L++NP
Sbjct: 696 RKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPI 755
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV +H++RE+V +K L++ ++ST + AD FTKA+
Sbjct: 756 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI 798
Score = 70.9 bits (172), Expect(3) = 6e-49
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRS+V ALQYLT+TRPDI++++N VCQ++HAP +H+ AVK ILR
Sbjct: 593 DSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILR 641
Score = 54.3 bits (129), Expect(3) = 6e-49
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFTSG-ALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
+K T+ GL F +L + +SDADWAG DR+S G+ VFLG N + WSA+K
Sbjct: 643 VKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARK 697
>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
Length = 1384
Score = 125 bits (314), Expect(3) = 1e-48
Identities = 61/103 (59%), Positives = 80/103 (77%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSS E+EY+ LA T EL+W+ RDL++ + P+IWCDNIS+ISLASNP
Sbjct: 1250 KKHKTVSRSSAEAEYRQLAYTAAELSWLRSLFRDLNVFLS-CPRIWCDNISSISLASNPV 1308
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FH+RTKHIEV YHY+R+KVV++EL V +VST + ADIFTK +
Sbjct: 1309 FHSRTKHIEVDYHYVRDKVVRQELAVSYVSTADQTADIFTKGL 1351
Score = 71.6 bits (174), Expect(3) = 1e-48
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D + YRSIV ALQYLT+TRPDI YAVN VCQ+MH+P H+ AVK ILR
Sbjct: 1158 DPSEYRSIVGALQYLTLTRPDICYAVNQVCQFMHSPTNVHWVAVKRILR 1206
Score = 44.3 bits (103), Expect(3) = 1e-48
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +3
Query: 168 IKGTIQYGLHFTSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKKHQ 335
+K T+ +GL + G+ + AYSDAD+AGD DR S G+C S+KKH+
Sbjct: 1208 LKYTLNHGLVYQPGSHKLVAYSDADYAGDPDDRHSTGGFC----------SSKKHK 1253
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 117 bits (294), Expect(3) = 2e-48
Identities = 55/103 (53%), Positives = 74/103 (71%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSSTE+EYKALA T E+ W+ L +L I P + ++WCDNI A + +NP
Sbjct: 1311 RKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPKIAKVWCDNIGAKYMTANPV 1370
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV YH++RE+V +K LQV ++ST + AD FTK +
Sbjct: 1371 FHARTKHIEVDYHFVRERVARKFLQVEYISTKDQVADGFTKTL 1413
Score = 69.7 bits (169), Expect(3) = 2e-48
Identities = 31/49 (63%), Positives = 39/49 (79%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRS+V ALQYLT+TRPD++++VN VCQY+HAP H+ A K ILR
Sbjct: 1208 DSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAPTTKHWAAAKRILR 1256
Score = 53.5 bits (127), Expect(3) = 2e-48
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFT-SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
+K T++ GL + S +L +A+SDADWAG DR S G+ VF+G N + WSA+K
Sbjct: 1258 LKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGGFAVFIGPNLVSWSARK 1312
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 114 bits (284), Expect(3) = 2e-48
Identities = 55/103 (53%), Positives = 74/103 (71%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSSTESEYKALA T E+ WV L +L + P + ++WCDN+ A L++NP
Sbjct: 1128 RKQATVSRSSTESEYKALANATAEIMWVQTLLAELQVESPSMAKLWCDNLGAKYLSANPV 1187
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV YH++RE+V +K L++ V T + AD FTKA+
Sbjct: 1188 FHARTKHIEVDYHFVRERVSRKLLEIDFVPTGDQVADGFTKAL 1230
Score = 71.2 bits (173), Expect(3) = 2e-48
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRS+V ALQYLT+TRPDIA+ VN VCQ++HAP H+ AVK ILR
Sbjct: 1025 DATHYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTHHWAAVKRILR 1073
Score = 55.5 bits (132), Expect(3) = 2e-48
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFT-SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
+K + GL + S ++ +AYSDADWAG DR+S G+ VFLGDN + WSA+K
Sbjct: 1075 LKQCTRLGLKLSKSRSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWSARK 1129
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 119 bits (298), Expect(3) = 2e-48
Identities = 56/103 (54%), Positives = 75/103 (72%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSSTE+EYKALA T E+ W+ L +L I VP + ++WCDNI A + +NP
Sbjct: 911 RKQATVSRSSTEAEYKALANATAEIMWIQTLLHELGIQVPKIAKVWCDNIGAKYMTANPV 970
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV YH++RE+V +K LQV ++ST + AD FTK +
Sbjct: 971 FHARTKHIEVDYHFVRERVARKLLQVEYISTKDQVADGFTKTL 1013
Score = 66.6 bits (161), Expect(3) = 2e-48
Identities = 30/49 (61%), Positives = 38/49 (77%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRS+V ALQYLT+TRPD++++VN VCQY+HA H+ A K ILR
Sbjct: 808 DSTRYRSLVGALQYLTLTRPDLSFSVNKVCQYLHAATTKHWVAAKRILR 856
Score = 54.7 bits (130), Expect(3) = 2e-48
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFT-SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
+K T++ GL + S +L +A+SDADWAG DR+S G+ VF+G N + WSA+K
Sbjct: 858 LKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRSTGGFAVFIGPNLVSWSARK 912
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 115 bits (287), Expect(3) = 3e-48
Identities = 52/103 (50%), Positives = 75/103 (72%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSS E+EYKALA T E+ WV L++L + P ++WCDN+ A L++NP
Sbjct: 1274 RKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPI 1333
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV +H++RE+V +K L++ ++ST + AD FTKA+
Sbjct: 1334 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI 1376
Score = 70.9 bits (172), Expect(3) = 3e-48
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRS+V ALQYLT+TRPDI++++N VCQ++HAP +H+ AVK ILR
Sbjct: 1171 DSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILR 1219
Score = 54.3 bits (129), Expect(3) = 3e-48
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFTSG-ALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
+K T+ GL F +L + +SDADWAG DR+S G+ VFLG N + WSA+K
Sbjct: 1221 VKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARK 1275
>gb|EEC76475.1| hypothetical protein OsI_14210 [Oryza sativa Indica Group]
Length = 391
Score = 115 bits (287), Expect(3) = 3e-48
Identities = 52/103 (50%), Positives = 75/103 (72%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSS E+EYKALA T E+ WV L++L + P ++WCDN+ A L++NP
Sbjct: 266 RKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLWCDNLGAKYLSANPI 325
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV +H++RE+V +K L++ ++ST + AD FTKA+
Sbjct: 326 FHARTKHIEVDFHFVRERVARKLLEIAYISTKDQVADGFTKAI 368
Score = 70.9 bits (172), Expect(3) = 3e-48
Identities = 31/49 (63%), Positives = 41/49 (83%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRS+V ALQYLT+TRPDI++++N VCQ++HAP +H+ AVK ILR
Sbjct: 163 DSTQYRSVVGALQYLTLTRPDISFSINKVCQFLHAPTTTHWAAVKRILR 211
Score = 54.3 bits (129), Expect(3) = 3e-48
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFTSG-ALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
+K T+ GL F +L + +SDADWAG DR+S G+ VFLG N + WSA+K
Sbjct: 213 VKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGGFAVFLGPNLVSWSARK 267
>gb|AAD22155.1|AF061282_8 polyprotein [Sorghum bicolor]
Length = 1012
Score = 113 bits (283), Expect(3) = 5e-48
Identities = 54/103 (52%), Positives = 75/103 (72%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K PTV+RSSTE+EYKALA T E+ WV L +L + P ++WCDN+ A L++NP
Sbjct: 893 KKQPTVSRSSTEAEYKALANATAEMIWVQKLLNELGVRHPPRARLWCDNLGATYLSANPI 952
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIE+ +H++RE+V +K L+V +ST + AD FTKA+
Sbjct: 953 FHARTKHIEIDFHFVRERVAQKLLEVRFISTGDQLADGFTKAL 995
Score = 68.2 bits (165), Expect(3) = 5e-48
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T Y S+V ALQYLT+TRPDI++AVN VCQ++H+P H++AVK ILR
Sbjct: 790 DATKYCSVVGALQYLTLTRPDISFAVNKVCQFLHSPTTIHWSAVKRILR 838
Score = 57.8 bits (138), Expect(3) = 5e-48
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFT-SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
IKGT + G+ F+ S ++ +A++DADWAG DR+S G+ VFLG+N I W+AKK
Sbjct: 840 IKGTTKLGIKFSKSESMLVSAFADADWAGCVDDRRSTGGFAVFLGNNLISWTAKK 894
>emb|CAN83285.1| hypothetical protein VITISV_004139 [Vitis vinifera]
Length = 1556
Score = 113 bits (283), Expect(3) = 8e-48
Identities = 53/101 (52%), Positives = 73/101 (72%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K T++RSSTE+EY+A+A TT ELTW+S L D HIP+ P ++ DN SA+ +A NP
Sbjct: 1391 KKQHTISRSSTEAEYRAMAHTTAELTWMSFILNDFHIPLASTPTLYYDNTSALHMAINPV 1450
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTK 625
FHAR+KHIE+ YH++RE+V L H+ST + AD+FTK
Sbjct: 1451 FHARSKHIELDYHFVRERVALGLLVTQHISTEKQVADLFTK 1491
Score = 67.8 bits (164), Expect(3) = 8e-48
Identities = 34/55 (61%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFTSGA-LRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
+KGTI GLHFTS L A+SDADWAG R+SI+GYC FLG N I W AKK
Sbjct: 1338 VKGTIDIGLHFTSHTTLDLCAFSDADWAGCLTTRRSITGYCTFLGGNIISWCAKK 1392
Score = 57.4 bits (137), Expect(3) = 8e-48
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D + +R +V ALQYLT+TRPD++Y+VN Q+MHAP H V+ ILR
Sbjct: 1288 DPSYFRGLVGALQYLTLTRPDLSYSVNYASQFMHAPTLVHLKMVRRILR 1336
>ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [Sorghum bicolor]
gi|241942867|gb|EES16012.1| hypothetical protein
SORBIDRAFT_08g015513 [Sorghum bicolor]
Length = 757
Score = 110 bits (275), Expect(3) = 8e-48
Identities = 52/103 (50%), Positives = 74/103 (71%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
QK TV+RSSTE+EYKALA T E+ WV L +L +P V ++WCDN+ A L++NP
Sbjct: 646 QKQATVSRSSTEAEYKALANATAEVMWVQKLLAELCVPHARVARLWCDNLGAKYLSANPV 705
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIE+ +H++RE+V +K L + +S+ + AD FTK++
Sbjct: 706 FHARTKHIEIDFHFVRERVAQKLLDIRFISSEDQLADGFTKSL 748
Score = 72.4 bits (176), Expect(3) = 8e-48
Identities = 33/49 (67%), Positives = 41/49 (83%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRS+V ALQYLT+TRPDI++AVN VCQ++HAP +H +AVK ILR
Sbjct: 543 DCTRYRSLVGALQYLTLTRPDISFAVNKVCQFLHAPTTTHLSAVKRILR 591
Score = 55.8 bits (133), Expect(3) = 8e-48
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFTSGALRF-NAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
I+GT ++GL R +A+S ADWAGD DR+S G+ VFLG+N I W+A+K
Sbjct: 593 IQGTSKFGLRIRKSKCRIVSAFSYADWAGDVDDRRSTGGFAVFLGENLISWTAQK 647
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 114 bits (285), Expect(3) = 1e-47
Identities = 56/103 (54%), Positives = 74/103 (71%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSSTESEYKALA T E+ WV L +L + P + ++WCDN+ A L+SNP
Sbjct: 1328 RKQATVSRSSTESEYKALANATAEIMWVQTLLTELQVQSPPMAKLWCDNLGAKYLSSNPV 1387
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV YH++RE+V +K L++ V T + AD FTKA+
Sbjct: 1388 FHARTKHIEVDYHFVRERVSQKLLEIDFVPTGDQVADGFTKAL 1430
Score = 70.9 bits (172), Expect(3) = 1e-47
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRS+V ALQYLT+TRPDIA+ VN VCQ++HAP H+ AVK ILR
Sbjct: 1225 DATNYRSVVGALQYLTLTRPDIAFPVNKVCQFLHAPTTVHWAAVKRILR 1273
Score = 53.1 bits (126), Expect(3) = 1e-47
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +3
Query: 204 SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
S ++ +AYSDADWAG DR+S G+ VFLGDN + W A+K
Sbjct: 1288 SKSMLVSAYSDADWAGSLDDRRSTGGFAVFLGDNLVSWCARK 1329
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 119 bits (298), Expect(3) = 1e-47
Identities = 59/103 (57%), Positives = 77/103 (74%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSSTE+EYKALA T E+ WV L++L+I P + Q+WCDN+ A L+ NP
Sbjct: 1312 KKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPV 1371
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV YH++RE+V +K LQV +VST + AD FTKA+
Sbjct: 1372 FHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKAL 1414
Score = 67.0 bits (162), Expect(3) = 1e-47
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRSIV ALQYLT+TR DIA++VN VCQ++H P H+ AVK ILR
Sbjct: 1209 DATQYRSIVGALQYLTLTRLDIAFSVNKVCQFLHNPTTEHWAAVKRILR 1257
Score = 51.6 bits (122), Expect(3) = 1e-47
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +3
Query: 204 SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
S ++ + YSDADWAG DR+S G+ V+LGDN + W+AKK
Sbjct: 1272 SSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKK 1313
>gb|AAP20859.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 352
Score = 119 bits (298), Expect(3) = 1e-47
Identities = 59/103 (57%), Positives = 77/103 (74%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K TV+RSSTE+EYKALA T E+ WV L++L+I P + Q+WCDN+ A L+ NP
Sbjct: 227 KKQATVSRSSTEAEYKALANATAEIMWVQTLLQELNIVSPAMAQLWCDNMGAKYLSFNPV 286
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKHIEV YH++RE+V +K LQV +VST + AD FTKA+
Sbjct: 287 FHARTKHIEVDYHFVRERVARKLLQVDYVSTNDQVADGFTKAL 329
Score = 67.0 bits (162), Expect(3) = 1e-47
Identities = 32/49 (65%), Positives = 38/49 (77%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRSIV ALQYLT+TR DIA++VN VCQ++H P H+ AVK ILR
Sbjct: 124 DATQYRSIVGALQYLTLTRLDIAFSVNKVCQFLHNPTTEHWAAVKRILR 172
Score = 51.6 bits (122), Expect(3) = 1e-47
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +3
Query: 204 SGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
S ++ + YSDADWAG DR+S G+ V+LGDN + W+AKK
Sbjct: 187 SSSMIVSGYSDADWAGCLDDRRSTGGFAVYLGDNLVSWNAKK 228
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 113 bits (282), Expect(3) = 2e-47
Identities = 55/103 (53%), Positives = 75/103 (72%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K PTV+RSSTE+EYKA+A TT EL WV L++L I P +IWCDN+ A L++NP
Sbjct: 1329 RKQPTVSRSSTEAEYKAVANTTAELIWVQTVLKELGIESPKAAKIWCDNLGAKYLSANPV 1388
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHA+TKHI V YH++RE+V +K L++ V + + AD FTKA+
Sbjct: 1389 FHAKTKHIHVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKAL 1431
Score = 75.9 bits (185), Expect(3) = 2e-47
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRSIV ALQYLT+TRPDIAY+VN VCQ++HAP SH+ AVK ILR
Sbjct: 1226 DATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILR 1274
Score = 48.5 bits (114), Expect(3) = 2e-47
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 189 GLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
GLH S + + YSDAD AG DRKS G+ VFLG N + WSA+K
Sbjct: 1283 GLHVHKSASTLVHGYSDADGAGSIDDRKSTGGFAVFLGSNLVSWSARK 1330
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 113 bits (282), Expect(3) = 2e-47
Identities = 55/103 (53%), Positives = 75/103 (72%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K PTV+RSSTE+EYKA+A TT EL WV L++L I P +IWCDN+ A L++NP
Sbjct: 1329 RKQPTVSRSSTEAEYKAVANTTAELIWVQTVLKELGIESPKAAKIWCDNLGAKYLSANPV 1388
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHA+TKHI V YH++RE+V +K L++ V + + AD FTKA+
Sbjct: 1389 FHAKTKHIHVDYHFVRERVSQKLLEIDFVPSGDQVADGFTKAL 1431
Score = 75.9 bits (185), Expect(3) = 2e-47
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = +1
Query: 19 DVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
D T YRSIV ALQYLT+TRPDIAY+VN VCQ++HAP SH+ AVK ILR
Sbjct: 1226 DATQYRSIVGALQYLTLTRPDIAYSVNKVCQFLHAPTTSHWIAVKRILR 1274
Score = 48.5 bits (114), Expect(3) = 2e-47
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 189 GLHF-TSGALRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKK 329
GLH S + + YSDAD AG DRKS G+ VFLG N + WSA+K
Sbjct: 1283 GLHVHKSASTLVHGYSDADGAGSIDDRKSTGGFAVFLGSNLVSWSARK 1330
>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
putative protein [Arabidopsis thaliana]
Length = 1318
Score = 120 bits (301), Expect(3) = 2e-47
Identities = 53/103 (51%), Positives = 79/103 (76%)
Frame = +2
Query: 323 QKAPTVARSSTESEYKALALTTTELTWVSMFLRDLHIPVPHVPQIWCDNISAISLASNPS 502
+K PTV+RSSTE+EYK+L+ +E+ W+S LR+L IP+P P+++CDN+SA+ L +NP+
Sbjct: 1101 KKHPTVSRSSTEAEYKSLSDAASEILWLSTLLRELRIPLPDTPELFCDNLSAVYLTANPA 1160
Query: 503 FHARTKHIEVGYHYIREKVVKKELQVCHVSTLE*PADIFTKAV 631
FHARTKH ++ +H++RE+V K L V H+ E ADIFTK++
Sbjct: 1161 FHARTKHFDIDFHFVRERVALKALVVKHIPGSEQIADIFTKSL 1203
Score = 62.8 bits (151), Expect(3) = 2e-47
Identities = 31/54 (57%), Positives = 36/54 (66%)
Frame = +1
Query: 4 DSAFGDVTLYRSIVRALQYLTITRPDIAYAVNMVCQYMHAPLESHFTAVKCILR 165
+ F D T +RSI LQYLT+TRPDI +AVN VCQ MH P S F +K ILR
Sbjct: 993 EELFSDPTYFRSIAGKLQYLTLTRPDIQFAVNFVCQKMHQPTISDFHLLKRILR 1046
Score = 54.3 bits (129), Expect(3) = 2e-47
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +3
Query: 168 IKGTIQYGLHFTSGA-LRFNAYSDADWAGDSVDRKSISGYCVFLGDNPIIWSAKKH 332
IKGTI G+ ++ + AYSD+DW R+S+ G C F+G N + WS+KKH
Sbjct: 1048 IKGTITMGISYSRDSPTLLQAYSDSDWGNCKQTRRSVGGLCTFMGTNLVSWSSKKH 1103