BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00042466
         (541 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-...    81   1e-13
ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citr...    81   1e-13
emb|CBI40014.3| unnamed protein product [Vitis vinifera]               80   3e-13
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...    79   7e-13
ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cac...    72   9e-11
gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]      62   9e-08
ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trich...    60   4e-07
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...    59   8e-07

>ref|XP_006484754.1| PREDICTED: RNA polymerase sigma factor sigB-like isoform X1 [Citrus
           sinensis]
          Length = 605

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 10/115 (8%)
 Frame = +3

Query: 219 SKRMACMLPQFKCPPH---IHFRS-----HTHTNLFKTRQPVCFRVQCIMXXXXXXXXXX 374
           +K M+C+LPQFKC P    IHFR+     H  ++  K+++P+CFR  C++          
Sbjct: 21  NKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTA 80

Query: 375 XXXXXXXXQL--PSFEAHLNSVAADKSLTYAGAFGPPSKANLESTLATEALIMRE 533
                   +L  PS EAH N+VAA++  TY GA GP ++ NL ++LATE L   E
Sbjct: 81  MTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDE 135


>ref|XP_006437338.1| hypothetical protein CICLE_v10030998mg [Citrus clementina]
           gi|557539534|gb|ESR50578.1| hypothetical protein
           CICLE_v10030998mg [Citrus clementina]
          Length = 605

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 10/115 (8%)
 Frame = +3

Query: 219 SKRMACMLPQFKCPPH---IHFRS-----HTHTNLFKTRQPVCFRVQCIMXXXXXXXXXX 374
           +K M+C+LPQFKC P    IHFR+     H  ++  K+++P+CFR  C++          
Sbjct: 21  NKNMSCLLPQFKCQPDTFSIHFRTLHNHQHHSSHPSKSKEPICFRTHCVLSTTSPSTSTA 80

Query: 375 XXXXXXXXQL--PSFEAHLNSVAADKSLTYAGAFGPPSKANLESTLATEALIMRE 533
                   +L  PS EAH N+VAA++  TY GA GP ++ NL ++LATE L   E
Sbjct: 81  MTTVLDVEKLRLPSLEAHSNAVAANRQWTYFGAVGPSTEENLGTSLATETLTSDE 135


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 45/107 (42%), Positives = 60/107 (56%), Gaps = 3/107 (2%)
 Frame = +3

Query: 228 MACMLPQFKCPPHIHFRSHTHTNLF-KTRQPVCFRVQCIMXXXXXXXXXXXXXXXXXXQL 404
           M+C+LPQFKCPP   F +H   ++  K R+ + FRVQC +                  +L
Sbjct: 1   MSCLLPQFKCPPDT-FSTHPKLHILSKNREAIYFRVQCALSTTSPPLSTSTTAVLDIEKL 59

Query: 405 --PSFEAHLNSVAADKSLTYAGAFGPPSKANLESTLATEALIMREGA 539
             PS E+H NSVAA +  TY G  GPP++AN E+TLA E L+  E A
Sbjct: 60  RLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEA 106


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 45/110 (40%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
 Frame = +3

Query: 228 MACMLPQFKCPPHIHFRSHTHTNLF----KTRQPVCFRVQCIMXXXXXXXXXXXXXXXXX 395
           M+C+LPQFKCPP   F +H   ++     K R+ + FRVQC +                 
Sbjct: 1   MSCLLPQFKCPPDT-FSTHPKLHILCKSPKNREAIYFRVQCALSTTSPPLSTSTTAVLDI 59

Query: 396 XQL--PSFEAHLNSVAADKSLTYAGAFGPPSKANLESTLATEALIMREGA 539
            +L  PS E+H NSVAA +  TY G  GPP++AN E+TLA E L+  E A
Sbjct: 60  EKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEA 109


>ref|XP_007029868.1| RNApolymerase sigma subunit 2 [Theobroma cacao]
           gi|508718473|gb|EOY10370.1| RNApolymerase sigma subunit
           2 [Theobroma cacao]
          Length = 623

 Score = 72.0 bits (175), Expect = 9e-11
 Identities = 49/145 (33%), Positives = 67/145 (46%), Gaps = 41/145 (28%)
 Frame = +3

Query: 228 MACMLPQFKCPPH---IHFRSHTHTNLF-------------------------------- 302
           M+C+LPQFKC P    I FR+H H++ F                                
Sbjct: 1   MSCLLPQFKCQPDTFSIQFRTH-HSHHFLIAVTGMVKYFSPRQCSCGNLTNPPKVSGLIF 59

Query: 303 ----KTRQPVCFRVQCIMXXXXXXXXXXXXXXXXXXQL--PSFEAHLNSVAADKSLTYAG 464
               K ++ +CFR QC++                  +L  PSFEAH NSVA D+  TY G
Sbjct: 60  VVLAKHKEHICFRTQCVLSTTSSSTSTTATAVLDVEKLRLPSFEAHPNSVAVDRPWTYIG 119

Query: 465 AFGPPSKANLESTLATEALIMREGA 539
           A GPPS+A+L +TLAT+ L+  + A
Sbjct: 120 ATGPPSEASLGATLATDNLLTSDEA 144


>gb|EXB70625.1| RNA polymerase sigma factor rpoD [Morus notabilis]
          Length = 574

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
 Frame = +3

Query: 228 MACMLPQFKCPP-----HIHFRSHT----HTNLFKTRQPVCFRVQCIMXXXXXXXXXXXX 380
           M+C+LPQF C P       +FR+H+    +++L K R  +    QC++            
Sbjct: 1   MSCLLPQFNCKPDTFSAQFNFRTHSLPTPNSHLPKARD-INSLAQCVLSTTSPSTSVGAT 59

Query: 381 XXXXXXQL--PSFEAHLNSVAADKSLTYAGAFGPPSKANLESTLATEALIMREGA 539
                 +L  PS +A+  SV +++  TY GA GPP +AN E+TLATE L+  E A
Sbjct: 60  YVLSVEKLRFPSLDANSESVTSNRPWTYTGATGPPVEANFEATLATETLLTSEEA 114


>ref|XP_002319746.2| SIGMA FACTOR B family protein [Populus trichocarpa]
           gi|550325142|gb|EEE95669.2| SIGMA FACTOR B family
           protein [Populus trichocarpa]
          Length = 567

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
 Frame = +3

Query: 228 MACMLPQFKCPPH---IHFRSHTHTNLFKTRQPVCFRVQCIMXXXXXXXXXXXXXXXXXX 398
           M+C+LPQFKC P    +HFR+  H     T+ P     QC++                  
Sbjct: 1   MSCLLPQFKCQPDTFSVHFRNLQHHGTNHTQLP-----QCVLSSASPSTAVLDLEKL--- 52

Query: 399 QLPSFEAHLNSVAADKSLTYAGAFGPPSKANLESTLATEALIMREGA 539
           +LPS E H +S++A++  TY G  GP  K    ++LA E LI  + A
Sbjct: 53  RLPSLEPHSDSISANRPWTYIGGIGPQKKPPFGTSLAAETLIANDEA 99


>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
           gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
           rpoD1, putative [Ricinus communis]
          Length = 569

 Score = 58.9 bits (141), Expect = 8e-07
 Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
 Frame = +3

Query: 228 MACMLPQFKCPP---HIHFRSH-----THTNLFKTRQPVCFRVQCIMXXXXXXXXXXXXX 383
           M+C+LPQFKC P    IHFR++       T   K+R+P+ +R QCI+             
Sbjct: 2   MSCLLPQFKCQPDTFSIHFRANYFHFSNVTQSTKSREPIYYRAQCIL-STTSPSTSTAVL 60

Query: 384 XXXXXQLPSFEAHLNSVAADKSLTYAGAFGPPSKANLESTLATEALIMREGA 539
                +LPSFEA  +S+A +   TYA  FG        STLATE LI  + A
Sbjct: 61  DLEKLRLPSFEAPSDSIAPNSPWTYA-TFG--------STLATETLITSDEA 103