BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00042017
         (310 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus] gi|1...   171   7e-41
dbj|BAE93234.1| coat protein [Cycas necrotic stunt virus]             171   7e-41
gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus]             167   1e-39
ref|NP_733975.1| capsid protein [Cycas necrotic stunt virus]          150   9e-38

>ref|NP_620620.2| polyprotien 2 [Cycas necrotic stunt virus]
            gi|124106315|sp|Q8QVU9.2|POL2_CNSV RecName: Full=RNA2
            polyprotein; AltName: Full=P2; Contains: RecName:
            Full=Protein 2A; Short=P2A; Contains: RecName:
            Full=Movement protein; AltName: Full=2B-MP; Contains:
            RecName: Full=Coat protein; AltName: Full=2C-CP
            gi|84369993|dbj|BAB89370.2| polyprotien 2 [Cycas necrotic
            stunt virus]
          Length = 1240

 Score =  171 bits (434), Expect = 7e-41
 Identities = 82/93 (88%), Positives = 85/93 (91%)
 Frame = +2

Query: 2    TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGKSISSIFCAIEVLPGFSFYGRTGSPRL 181
            TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKG++ISSIFCAIEVLPGFSFYGRTGSPRL
Sbjct: 1131 TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRNISSIFCAIEVLPGFSFYGRTGSPRL 1190

Query: 182  CVASTTVSPISDVSASNSQSGDEDIGDQYSAAL 280
             V  TTV P +D S SNSQ GDEDIGDQYSAAL
Sbjct: 1191 SVVGTTVPPTADASTSNSQGGDEDIGDQYSAAL 1223


>dbj|BAE93234.1| coat protein [Cycas necrotic stunt virus]
          Length = 569

 Score =  171 bits (434), Expect = 7e-41
 Identities = 82/93 (88%), Positives = 87/93 (93%)
 Frame = +2

Query: 2   TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGKSISSIFCAIEVLPGFSFYGRTGSPRL 181
           TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKG++ISSIFCAIEVLPGFSFYGRTGSPRL
Sbjct: 460 TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRNISSIFCAIEVLPGFSFYGRTGSPRL 519

Query: 182 CVASTTVSPISDVSASNSQSGDEDIGDQYSAAL 280
            VA TTV P++D S SNSQSGDEDIGDQ +AAL
Sbjct: 520 SVAGTTVPPVADASTSNSQSGDEDIGDQCAAAL 552


>gb|AEN25476.2| polyprotein 2 [Cycas necrotic stunt virus]
          Length = 1289

 Score =  167 bits (424), Expect = 1e-39
 Identities = 81/93 (87%), Positives = 84/93 (90%)
 Frame = +2

Query: 2    TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGKSISSIFCAIEVLPGFSFYGRTGSPRL 181
            TVPLELGTFAGPTPL+KLDFKYRNWIRFTTPKGKSISSIFCAIEVLPGFSFYGRTGSPRL
Sbjct: 1180 TVPLELGTFAGPTPLRKLDFKYRNWIRFTTPKGKSISSIFCAIEVLPGFSFYGRTGSPRL 1239

Query: 182  CVASTTVSPISDVSASNSQSGDEDIGDQYSAAL 280
             VA TTV PI D S S+ Q GDED GDQY+AAL
Sbjct: 1240 SVAGTTVPPIVDASTSSLQGGDEDTGDQYAAAL 1272


>ref|NP_733975.1| capsid protein [Cycas necrotic stunt virus]
          Length = 564

 Score =  150 bits (380), Expect(2) = 9e-38
 Identities = 72/85 (84%), Positives = 75/85 (88%)
 Frame = +2

Query: 2   TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGKSISSIFCAIEVLPGFSFYGRTGSPRL 181
           TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKG++ISSIFCAIEVLPGFSFYGRTGSPRL
Sbjct: 448 TVPLELGTFAGPTPLKKLDFKYRNWIRFTTPKGRNISSIFCAIEVLPGFSFYGRTGSPRL 507

Query: 182 CVASTTVSPISDVSASNSQSGDEDI 256
            V  TTV P +D S SNSQ GD  I
Sbjct: 508 SVVGTTVPPTADASTSNSQGGDMKI 532



 Score = 32.0 bits (71), Expect(2) = 9e-38
 Identities = 16/21 (76%), Positives = 16/21 (76%)
 Frame = +3

Query: 246 MKTLEINTLLP*AGGEDEGFV 308
           MK LEIN LLP AGGEDE  V
Sbjct: 530 MKILEINILLPWAGGEDEARV 550