BLASTX nr result
ID: Akebia25_contig00041608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00041608
(294 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_007761644.1| reverse transcriptase [Rose yellow vein viru... 90 4e-16
gb|ADZ45044.1| reverse transcriptase [Sweet potato caulimo-like ... 75 1e-11
gb|ADZ45038.1| reverse transcriptase [Sweet potato caulimo-like ... 75 1e-11
gb|ADZ45046.1| reverse transcriptase [Sweet potato caulimo-like ... 74 2e-11
ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia fl... 74 2e-11
ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus] ... 74 3e-11
gb|ADZ45045.1| reverse transcriptase [Sweet potato caulimo-like ... 74 3e-11
gb|ADZ45043.1| reverse transcriptase [Sweet potato caulimo-like ... 74 3e-11
ref|NP_056848.1| aspartic protease/reverse transcriptase [Cassav... 73 5e-11
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus] 73 5e-11
ref|NP_043933.1| hypothetical protein [Strawberry vein banding v... 72 8e-11
gb|ADZ45041.1| reverse transcriptase [Sweet potato caulimo-like ... 72 8e-11
gb|ADZ45039.1| reverse transcriptase [Sweet potato caulimo-like ... 72 8e-11
gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1] 72 1e-10
gb|ADZ45040.1| reverse transcriptase [Sweet potato caulimo-like ... 71 2e-10
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]... 69 9e-10
gb|AFB69855.1| polyprotein, partial [Ananas comosus] 68 1e-09
gb|ADN96014.1| polyprotein [Ananas comosus] 68 1e-09
gb|ADN96013.1| polyprotein [Ananas comosus] 68 1e-09
gb|ADN96011.1| polyprotein [Ananas comosus] 68 1e-09
>ref|YP_007761644.1| reverse transcriptase [Rose yellow vein virus]
gi|397559412|gb|AFO54491.1| reverse transcriptase [Rose
yellow vein virus]
Length = 819
Score = 89.7 bits (221), Expect = 4e-16
Identities = 47/88 (53%), Positives = 61/88 (69%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P +F ++ VL+ H +Y V+IDDIIVFS+T +EH H+ IA L+++GIV+SKKK
Sbjct: 519 PSIFQ--AKMDNVLEDHHDYCLVYIDDIIVFSRTLEEHKIHVITIAKTLKKNGIVISKKK 576
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVLK 9
E T I FLGCEIENG II Q HVL+
Sbjct: 577 MELGLTKINFLGCEIENGRIILQNHVLE 604
>gb|ADZ45044.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P ++ F + + + ++ V+IDDI++FSKT +EH HL + + GIV+SKKK
Sbjct: 187 PSIYQQFMDG--IFRPYYDFILVYIDDILIFSKTYEEHKIHLAIFRSIIIKHGIVLSKKK 244
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
E R IEFLG +IE GGI QPH++
Sbjct: 245 AEIGRQKIEFLGVKIEQGGIELQPHII 271
>gb|ADZ45038.1| reverse transcriptase [Sweet potato caulimo-like virus]
gi|325698343|gb|ADZ45042.1| reverse transcriptase [Sweet
potato caulimo-like virus]
Length = 291
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/87 (42%), Positives = 54/87 (62%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P ++ F + + + E+ V+IDDI++FSKT +EH HL + + GIV+SKKK
Sbjct: 187 PSIYQQFMDG--IFRPYYEFILVYIDDILIFSKTYEEHKIHLMIFRNIILKHGIVLSKKK 244
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
E + IEFLG +IE GGI QPH++
Sbjct: 245 AEIGKQKIEFLGVKIEQGGIELQPHII 271
>gb|ADZ45046.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 276
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/75 (46%), Positives = 50/75 (66%)
Frame = -2
Query: 236 VLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKKTEFNRTSIEFLG 57
+ + + ++ V+IDDI++FSKT +EH HL + + GIV+SKKK E R IEFLG
Sbjct: 194 IFRPYYDFILVYIDDILIFSKTYEEHKIHLAIFRSIIIKHGIVLSKKKAEIGRQKIEFLG 253
Query: 56 CEIENGGIIHQPHVL 12
+IE GGI QPH++
Sbjct: 254 VKIEQGGIELQPHII 268
>ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
gi|219815610|gb|ACL36982.1| putative enzymatic
polyprotein [Rudbeckia flower distortion virus]
Length = 701
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/88 (43%), Positives = 56/88 (63%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P LF F ++ + ++ + AV++DDI+VFSKT DEH HL + + E+GI++SKKK
Sbjct: 405 PGLFQRFMDNS--FKEYSAFCAVYVDDILVFSKTLDEHYDHLETVLRKCIETGIILSKKK 462
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVLK 9
E +T I +LG I NG I Q H+L+
Sbjct: 463 AEVAKTKINYLGFTISNGEIELQSHILE 490
>ref|YP_004347415.1| replicase [Sweet potato caulimo-like virus]
gi|327415369|gb|ADR03142.2| replicase [Sweet potato
caulimo-like virus]
Length = 641
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P ++ F + + + ++ V+IDDI++FSKT +EH HL + + GIV+SKKK
Sbjct: 337 PSIYQQFMDG--IFRPYYDFILVYIDDILIFSKTYEEHKIHLEIFRNIIIKHGIVLSKKK 394
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
E + IEFLG +IE GGI QPH++
Sbjct: 395 AEIGKQKIEFLGVKIEQGGIELQPHII 421
>gb|ADZ45045.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P ++ F + + + ++ V+IDDI++FSKT +EH HL + + GIV+SKKK
Sbjct: 187 PSIYQQFMDG--IFRPYYDFILVYIDDILIFSKTYEEHKIHLAIFRSIIIKHGIVLSKKK 244
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
E + IEFLG +IE GGI QPH++
Sbjct: 245 AEIGKQKIEFLGVKIEQGGIELQPHII 271
>gb|ADZ45043.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P ++ F + + + ++ V+IDDI++FSKT +EH HL + + GIV+SKKK
Sbjct: 187 PSIYQQFMDG--IFRPYYDFILVYIDDILIFSKTYEEHKIHLAIFRSIIIKHGIVLSKKK 244
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
E + IEFLG +IE GGI QPH++
Sbjct: 245 AEIGKQKIEFLGVKIEQGGIELQPHII 271
>ref|NP_056848.1| aspartic protease/reverse transcriptase [Cassava vein mosaic virus]
gi|81945490|sp|Q89703.1|POL_CSVMV RecName: Full=Putative
enzymatic polyprotein; Includes: RecName: Full=Protease;
Short=PR; Includes: RecName: Full=Reverse transcriptase;
Short=RT; Includes: RecName: Full=Ribonuclease H
gi|665934|gb|AAA79873.1| ORF III [Cassava vein mosaic
virus] gi|1399884|gb|AAB03327.1| ORF 3 [Cassava vein
mosaic virus]
Length = 652
Score = 72.8 bits (177), Expect = 5e-11
Identities = 35/87 (40%), Positives = 55/87 (63%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P +F F ++ + + ++ V+IDDI+VFSKT +EH H+ +G+++SKKK
Sbjct: 341 PSIFQQFMD--RIFRPYYDFIIVYIDDILVFSKTIEEHKIHIAKFRDITLANGLIISKKK 398
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
TE + I+FLG +IE GGI QPH++
Sbjct: 399 TELCKEKIDFLGVQIEQGGIELQPHII 425
>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
Length = 699
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = -2
Query: 227 VHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKKTEFNRTSIEFLGCEI 48
++ + AV++DDIIVFSKT+DEHL H++ + + GIV+SKKK + +T+I FLG I
Sbjct: 417 MYPSFCAVYVDDIIVFSKTEDEHLGHVKIVLNRCKALGIVLSKKKAQLCKTTINFLGLVI 476
Query: 47 ENGGIIHQPHV 15
E G + Q H+
Sbjct: 477 ERGNLKVQSHI 487
>ref|NP_043933.1| hypothetical protein [Strawberry vein banding virus]
gi|1360613|emb|CAA65970.1| ORF V [Strawberry vein
banding virus]
Length = 708
Score = 72.0 bits (175), Expect = 8e-11
Identities = 32/71 (45%), Positives = 50/71 (70%)
Frame = -2
Query: 227 VHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKKTEFNRTSIEFLGCEI 48
++ ++ AV++DDIIVFSKT++EHL H++ + + GIV+SKKK + +T+I FLG I
Sbjct: 426 MYPQFCAVYVDDIIVFSKTEEEHLGHVKIVLNRCKALGIVLSKKKAQLCKTTINFLGLVI 485
Query: 47 ENGGIIHQPHV 15
E G + Q H+
Sbjct: 486 ERGNLKVQSHI 496
>gb|ADZ45041.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/87 (41%), Positives = 53/87 (60%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P ++ F + + + ++ V+IDDI++FSKT +EH HL + + GIV+SKKK
Sbjct: 187 PSIYQQFMDG--IFRPYYDFILVYIDDILIFSKTYEEHKIHLEIFRNLVIKYGIVLSKKK 244
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
E + IEFLG IE GGI QPH++
Sbjct: 245 AEIGKQRIEFLGVRIEQGGIELQPHII 271
>gb|ADZ45039.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/87 (41%), Positives = 53/87 (60%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P ++ F + + + ++ V+IDDI++FSKT +EH HL + + GIV+SKKK
Sbjct: 187 PSIYQQFMDG--IFRPYYDFILVYIDDILIFSKTYEEHKIHLEIFRNLVIKYGIVLSKKK 244
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
E + IEFLG IE GGI QPH++
Sbjct: 245 AEIGKQRIEFLGVRIEQGGIELQPHII 271
>gb|AGC25937.1| hypothetical protein, partial [Piper DNA virus 1]
Length = 2027
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/87 (44%), Positives = 53/87 (60%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P +F F S L E+ V+IDDI+V S T EH+ HL + ++E+GIV+SKKK
Sbjct: 1052 PAIFQRFMDS---LFKKYEFCIVYIDDILVASDTVQEHIKHLELVFKTIKEAGIVISKKK 1108
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
TE +T I FLG +I G I QPH++
Sbjct: 1109 TEIAKTYINFLGLKIGKGQIELQPHIV 1135
>gb|ADZ45040.1| reverse transcriptase [Sweet potato caulimo-like virus]
Length = 291
Score = 70.9 bits (172), Expect = 2e-10
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = -2
Query: 272 PPLFSLFSQSTKVLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKK 93
P ++ F + + + ++ V+IDDI++FS+T +EH HL + + GIV+SKKK
Sbjct: 187 PSIYQQFMDG--IFRPYYDFILVYIDDILIFSRTYEEHKIHLEIFRNLVIKYGIVLSKKK 244
Query: 92 TEFNRTSIEFLGCEIENGGIIHQPHVL 12
E + IEFLG IE GGI QPH++
Sbjct: 245 AEIGKQRIEFLGVRIEQGGIELQPHII 271
>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
bacilliform virus GD1]
Length = 1892
Score = 68.6 bits (166), Expect = 9e-10
Identities = 30/69 (43%), Positives = 50/69 (72%)
Frame = -2
Query: 215 YSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKKTEFNRTSIEFLGCEIENGG 36
+ AV+IDDI+VFS++++EH+ H+R + + RE+G+V+S K + + +EFLG +E G
Sbjct: 1487 FIAVYIDDILVFSQSEEEHIKHIRVMLEKCRENGLVLSPTKMKIAQRKVEFLGAILEAGR 1546
Query: 35 IIHQPHVLK 9
I QPH++K
Sbjct: 1547 IQLQPHIIK 1555
>gb|AFB69855.1| polyprotein, partial [Ananas comosus]
Length = 180
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = -2
Query: 236 VLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKKTEFNRTSIEFLG 57
+ H ++ V++DDI+VFSK EHL HL+ + E + GI++SK K E + I FLG
Sbjct: 15 IFNEHRDFVLVYVDDILVFSKNIQEHLGHLQVVFHEFIKHGIIISKNKVELCKKYINFLG 74
Query: 56 CEIENGGIIHQPHVLK 9
I G I QPH+ K
Sbjct: 75 VTIREGKIKLQPHIAK 90
>gb|ADN96014.1| polyprotein [Ananas comosus]
Length = 198
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = -2
Query: 236 VLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKKTEFNRTSIEFLG 57
+ H ++ V++DDI+VFSK EHL HL+ + E + GI++SK K E + I FLG
Sbjct: 25 IFNEHRDFVLVYVDDILVFSKNMQEHLGHLQIVFHEFIKHGIIISKNKVELCKKYINFLG 84
Query: 56 CEIENGGIIHQPHVLK 9
I G I QPH+ K
Sbjct: 85 VTIGEGKIKLQPHIAK 100
>gb|ADN96013.1| polyprotein [Ananas comosus]
Length = 192
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = -2
Query: 236 VLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKKTEFNRTSIEFLG 57
+ H ++ V++DDI+VFSK EHL HL+ + E + GI++SK K E + I FLG
Sbjct: 25 IFNEHRDFVLVYVDDILVFSKNMQEHLGHLQIVFHEFIKHGIIISKNKVELCKKYINFLG 84
Query: 56 CEIENGGIIHQPHVLK 9
I G I QPH+ K
Sbjct: 85 VTIGEGKIKLQPHIAK 100
>gb|ADN96011.1| polyprotein [Ananas comosus]
Length = 200
Score = 68.2 bits (165), Expect = 1e-09
Identities = 32/76 (42%), Positives = 45/76 (59%)
Frame = -2
Query: 236 VLQVHTEYSAVHIDDIIVFSKTQDEHLAHLRAIAIELRESGIVVSKKKTEFNRTSIEFLG 57
+ H ++ V++DDI+VFSK EHL HL+ + E + GI++SK K E + I FLG
Sbjct: 25 IFNEHRDFVLVYVDDILVFSKNMQEHLGHLQIVFHEFIKHGIIISKNKVELCKKYINFLG 84
Query: 56 CEIENGGIIHQPHVLK 9
I G I QPH+ K
Sbjct: 85 VTIGEGKIKLQPHIAK 100