BLASTX nr result

ID: Akebia25_contig00041413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00041413
         (332 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006428285.1| hypothetical protein CICLE_v10013389mg, part...    69   9e-10
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    61   2e-07
gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]                56   5e-06
gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana]               56   5e-06
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]          56   5e-06

>ref|XP_006428285.1| hypothetical protein CICLE_v10013389mg, partial [Citrus clementina]
           gi|557530342|gb|ESR41525.1| hypothetical protein
           CICLE_v10013389mg, partial [Citrus clementina]
          Length = 127

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = +3

Query: 126 YPYPSTLNVGNFVTIKLTHSNFLLWKTQILGLIESQDMMGFI 251
           +PYPSTLN+ NFV++KLT +N++LWKTQI GLIESQDM  F+
Sbjct: 14  FPYPSTLNISNFVSLKLTQNNYMLWKTQISGLIESQDMGEFV 55


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/61 (40%), Positives = 42/61 (68%)
 Frame = +3

Query: 120 SKYPYPSTLNVGNFVTIKLTHSNFLLWKTQILGLIESQDMMGFIDGEFSIPDCQTIILDT 299
           + YP+P  ++V + VT+KLT SN+LLWKTQ   L+ SQ ++GF++G  + P    ++++ 
Sbjct: 3   TSYPFPDNVHVTSSVTLKLTDSNYLLWKTQFESLLSSQKLIGFVNGAVNAPSQSRLVVNG 62

Query: 300 E 302
           E
Sbjct: 63  E 63


>gb|AAD43604.1|AC005698_3 T3P18.3 [Arabidopsis thaliana]
          Length = 1309

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/59 (38%), Positives = 40/59 (67%)
 Frame = +3

Query: 126 YPYPSTLNVGNFVTIKLTHSNFLLWKTQILGLIESQDMMGFIDGEFSIPDCQTIILDTE 302
           YP+P  ++V + VT+KL  SN+LLWKTQ   L+ SQ ++GF++G  + P    ++++ +
Sbjct: 5   YPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDD 63


>gb|AAF70842.1|AC003113_9 F24O1.21 [Arabidopsis thaliana]
          Length = 361

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/59 (38%), Positives = 40/59 (67%)
 Frame = +3

Query: 126 YPYPSTLNVGNFVTIKLTHSNFLLWKTQILGLIESQDMMGFIDGEFSIPDCQTIILDTE 302
           YP+P  ++V + VT+KL  SN+LLWKTQ   L+ SQ ++GF++G  + P    ++++ +
Sbjct: 70  YPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDD 128


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/59 (38%), Positives = 40/59 (67%)
 Frame = +3

Query: 126 YPYPSTLNVGNFVTIKLTHSNFLLWKTQILGLIESQDMMGFIDGEFSIPDCQTIILDTE 302
           YP+P  ++V + VT+KL  SN+LLWKTQ   L+ SQ ++GF++G  + P    ++++ +
Sbjct: 5   YPFPDNVHVSSSVTLKLNDSNYLLWKTQFESLLSSQKLIGFVNGVVTPPAQTRLVVNDD 63


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