BLASTX nr result

ID: Akebia25_contig00040957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00040957
         (461 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB00038.1| reverse transcriptase family member [Glycine max]       57   3e-06
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    55   8e-06

>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/51 (49%), Positives = 36/51 (70%)
 Frame = -1

Query: 179 LGKKGIQNGYMDIIKEIYERVKTNVRASRKVMNEFPVTIGLHPGSVLGPYL 27
           L KKG++  Y+  I+++Y+RV T+VR      ++FP+TIGLH GS L PYL
Sbjct: 50  LEKKGVRVAYIRAIQDMYDRVSTSVRTQGGESDDFPITIGLHQGSTLSPYL 100


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/52 (48%), Positives = 33/52 (63%)
 Frame = -1

Query: 182 VLGKKGIQNGYMDIIKEIYERVKTNVRASRKVMNEFPVTIGLHPGSVLGPYL 27
           +L KKG++  Y+  IK++YE  KT VR        FP+T+GLH GS L PYL
Sbjct: 324 ILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQGSSLSPYL 375


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