BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00039953
         (359 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               59   9e-07
emb|CCH50966.1| T4.5 [Malus x robusta]                                 58   1e-06

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = -1

Query: 311 FFCINDRCTRRLLFRGPSKGSLFPLH--AHTNYGSSSLPFVGMVRQTSTLATWHKCLRHP 138
           +FC+ D  T ++L+ G S+  L+P    + T+  SSSL +V       +  TWH  L H 
Sbjct: 438 YFCVKDLKTGKMLYHGKSENGLYPFRFPSKTSKVSSSLAYVS---SRVSAETWHSRLGHA 494

Query: 137 NPHILTKLIRNKCIQIVCSSKIPQCLTCSLNKS 39
           +  I++K++ NK + ++ SS    C +C L KS
Sbjct: 495 SSTIVSKVLSNKAVPVLGSSNFSFCQSCPLGKS 527


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
 Frame = -1

Query: 332 YLSWTVCFFCINDRCTRRLLFRGPSKGSLFPLHAHTNYGSSSLPF--VGMVRQTSTLATW 159
           YL++    F + D  T ++LF+GPS+G L+P + + + G S +      ++   + + TW
Sbjct: 673 YLTFDPFGFYVKDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTW 732

Query: 158 HKCLRHPNPHILTKLIRNKCIQIV-CSSKIPQCLTCSLNKSCRLHFS 21
           H+ L HP+   L  ++    + ++   + +  C  C L KS RL FS
Sbjct: 733 HRRLGHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRLSFS 779