BLASTX nr result
ID: Akebia25_contig00039803
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00039803
(317 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAX09350.1| PsbB [Pseudovanilla ponapensis] 63 3e-09
gb|AAX09344.1| PsbB [Erythrorchis cassythoides] 62 7e-09
gb|AAX09345.1| PsbB [Erythrorchis altissima] 62 7e-09
gb|AAN32187.1| photosystem II CP47 protein, partial (chloroplast... 62 9e-09
gb|ADZ93585.1| CP47 protein [Juncus effusus] 61 1e-08
gb|AFA27408.1| photosystem II CP47 chlorophyll apoprotein [Thamn... 61 2e-08
ref|YP_008081910.1| photosystem II p680 chlorophyll A apoprotein... 61 2e-08
ref|YP_008081832.1| photosystem II p680 chlorophyll A apoprotein... 61 2e-08
ref|YP_008081676.1| photosystem II p680 chlorophyll A apoprotein... 61 2e-08
ref|YP_008081598.1| photosystem II p680 chlorophyll A apoprotein... 61 2e-08
gb|AFU94320.1| PsbB, partial (chloroplast) [Euphorbia maculata] 61 2e-08
ref|YP_006503715.1| photosystem II CP47 chlorophyll apoprotein (... 61 2e-08
gb|AFA27373.1| photosystem II CP47 chlorophyll apoprotein, parti... 61 2e-08
gb|AEX95745.1| photosystem II CP47 chlorophyll apoprotein (chlor... 61 2e-08
gb|AEX95739.1| photosystem II CP47 chlorophyll apoprotein (chlor... 61 2e-08
gb|AEX95738.1| photosystem II CP47 chlorophyll apoprotein (chlor... 61 2e-08
gb|AEX95737.1| photosystem II CP47 chlorophyll apoprotein (chlor... 61 2e-08
gb|AEX95721.1| photosystem II CP47 chlorophyll apoprotein (chlor... 61 2e-08
ref|YP_003587491.1| photosystem II CP47 chlorophyll apoprotein [... 61 2e-08
ref|YP_003587760.1| photosystem II 47 kDa protein [Lathyrus sati... 61 2e-08
>gb|AAX09350.1| PsbB [Pseudovanilla ponapensis]
Length = 430
Score = 63.2 bits (152), Expect(2) = 3e-09
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
+LDPMWRQGMF+ F+T LGITNS WNI TI +L WSYEG
Sbjct: 36 ILDPMWRQGMFVIPFMTRLGITNSWGGWNISGRTITNLGIWSYEG 80
Score = 23.9 bits (50), Expect(2) = 3e-09
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 21 SMALYELAVFDPSDPIL 37
>gb|AAX09344.1| PsbB [Erythrorchis cassythoides]
Length = 435
Score = 61.6 bits (148), Expect(2) = 7e-09
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
+LDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 41 ILDPMWRQGMFVIPFMTRLGITNSWGGWNISGRTITNFGIWSYEG 85
Score = 23.9 bits (50), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 26 SMALYELAVFDPSDPIL 42
>gb|AAX09345.1| PsbB [Erythrorchis altissima]
Length = 435
Score = 61.6 bits (148), Expect(2) = 7e-09
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
+LDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 41 ILDPMWRQGMFVIPFMTRLGITNSWGGWNISGRTITNFGIWSYEG 85
Score = 23.9 bits (50), Expect(2) = 7e-09
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 26 SMALYELAVFDPSDPIL 42
>gb|AAN32187.1| photosystem II CP47 protein, partial (chloroplast) [Astelia alpina]
Length = 498
Score = 61.6 bits (148), Expect(2) = 9e-09
Identities = 29/45 (64%), Positives = 33/45 (73%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS W+I TI +L WSYEG
Sbjct: 41 VLDPMWRQGMFVIPFMTRLGITNSWGGWSISGGTITNLGIWSYEG 85
Score = 23.5 bits (49), Expect(2) = 9e-09
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 26 SMALYELAVFDPSDPVL 42
>gb|ADZ93585.1| CP47 protein [Juncus effusus]
Length = 498
Score = 61.2 bits (147), Expect(2) = 1e-08
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS W+I T+ +L WSYEG
Sbjct: 41 VLDPMWRQGMFVIPFMTRLGITNSWGGWSISGGTVTNLGIWSYEG 85
Score = 23.5 bits (49), Expect(2) = 1e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 26 SMALYELAVFDPSDPVL 42
>gb|AFA27408.1| photosystem II CP47 chlorophyll apoprotein [Thamnochortus insignis]
Length = 527
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 70 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTITNPGIWSYEG 114
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 55 SMALYELAVFDPSDPVL 71
>ref|YP_008081910.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium mannii] gi|482662572|gb|AGK25794.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium mannii]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTIMNPGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>ref|YP_008081832.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium tracyanum] gi|482662414|gb|AGK25638.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium tracyanum]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTIMNPGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>ref|YP_008081676.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium sinense] gi|512721409|ref|YP_008081754.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium tortisepalum]
gi|482662098|gb|AGK25326.1| photosystem II p680
chlorophyll A apoprotein (chloroplast) [Cymbidium
sinense] gi|482662177|gb|AGK25404.1| photosystem II p680
chlorophyll A apoprotein (chloroplast) [Cymbidium
tortisepalum] gi|482662256|gb|AGK25482.1| photosystem II
p680 chlorophyll A apoprotein (chloroplast) [Cymbidium
tortisepalum] gi|482662335|gb|AGK25560.1| photosystem II
p680 chlorophyll A apoprotein (chloroplast) [Cymbidium
mannii] gi|482662493|gb|AGK25716.1| photosystem II p680
chlorophyll A apoprotein (chloroplast) [Cymbidium
tortisepalum]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTIMNPGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>ref|YP_008081598.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium aloifolium] gi|482662019|gb|AGK25248.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium aloifolium]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTIMNPGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>gb|AFU94320.1| PsbB, partial (chloroplast) [Euphorbia maculata]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGTINNPGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>ref|YP_006503715.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Erycina
pusilla] gi|339431327|gb|AEJ72521.1| photosystem II CP47
chlorophyll apoprotein (chloroplast) [Erycina pusilla]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTITNPGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>gb|AFA27373.1| photosystem II CP47 chlorophyll apoprotein, partial [Apostasia
wallichii]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTITNPGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>gb|AEX95745.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Phormium
tenax] gi|374974613|gb|AFA27400.1| photosystem II CP47
chlorophyll apoprotein, partial [Phormium tenax]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI T+ + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTVTNSGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>gb|AEX95739.1| photosystem II CP47 chlorophyll apoprotein (chloroplast)
[Hemiphylacus alatostylus]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI T+ + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTVTNSGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>gb|AEX95738.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Asparagus
asparagoides]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI T+ + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTVTNSGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>gb|AEX95737.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Asparagus
officinalis] gi|374974560|gb|AFA27374.1| photosystem II
CP47 chlorophyll apoprotein, partial [Asparagus
officinalis]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 28/45 (62%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI T+ + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTVTNSGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>gb|AEX95721.1| photosystem II CP47 chlorophyll apoprotein (chloroplast)
[Agapanthus africanus] gi|374974554|gb|AFA27371.1|
photosystem II CP47 chlorophyll apoprotein [Agapanthus
praecox]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTITNPGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>ref|YP_003587491.1| photosystem II CP47 chlorophyll apoprotein [Oncidium hybrid
cultivar] gi|254833130|gb|ACT83133.1| photosystem II
CP47 chlorophyll apoprotein [Oncidium hybrid cultivar]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNISGGTITNPGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52
>ref|YP_003587760.1| photosystem II 47 kDa protein [Lathyrus sativus]
gi|293338649|gb|ADE43621.1| photosystem II 47 kDa
protein (chloroplast) [Lathyrus sativus]
Length = 508
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +3
Query: 66 VLDPMWRQGMFLTAFITPLGITNS*DCWNIKYNTIRSLVSWSYEG 200
VLDPMWRQGMF+ F+T LGITNS WNI TI + WSYEG
Sbjct: 51 VLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGTITNSGIWSYEG 95
Score = 23.5 bits (49), Expect(2) = 2e-08
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +1
Query: 22 SHALYELPVFDLSDMFL 72
S ALYEL VFD SD L
Sbjct: 36 SMALYELAVFDPSDPVL 52