BLASTX nr result
ID: Akebia25_contig00039558
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00039558
(1387 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 335 3e-89
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 333 8e-89
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 330 7e-88
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 322 2e-85
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 319 2e-84
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 319 2e-84
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 319 2e-84
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 319 2e-84
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 319 2e-84
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 316 2e-83
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 315 4e-83
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 314 5e-83
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 313 9e-83
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 313 9e-83
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 310 7e-82
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 308 5e-81
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 304 5e-80
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 304 7e-80
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 300 1e-78
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 299 2e-78
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 335 bits (859), Expect = 3e-89
Identities = 160/357 (44%), Positives = 226/357 (63%), Gaps = 1/357 (0%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCN YKII+K+L R+ H +VG +QS FI GR I DNILLA E++ +YHK
Sbjct: 351 RPISCCNTFYKIIAKLLANRLKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKAD 410
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
P+ VD+MKA DTV+W + A L A+ P I W+ C+++ +++ NG G+
Sbjct: 411 GQPRCTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGF 470
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAG-LLDYHQRCNKQNKTHLCFADDLL 853
F +RGLRQGDPLSPYLFV+ ME L+ Q ++ YH RC++ N +HLCFADDLL
Sbjct: 471 FARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLL 530
Query: 854 IFSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLL 1033
+F + S R + D ++F L+ L+ N +S IFLAG D D + + GT
Sbjct: 531 MFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCP 590
Query: 1034 VKYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYC 1213
V+YLG+PL++++L + C PL++++ RI SW+ + LS+AGRL+L++SVL SI+VYW
Sbjct: 591 VRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASH 650
Query: 1214 FILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWNHA 1384
ILP K +K++E+ FLW+G + + V+W EIC P EGGLGI + WN A
Sbjct: 651 LILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKA 707
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 333 bits (855), Expect = 8e-89
Identities = 159/354 (44%), Positives = 227/354 (64%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNV+YK+ISKI+ R+ V K + NQSAF+K R + +N+LLA ELV++YHK
Sbjct: 530 RPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDT 589
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
S + A+K+D+ KA+D+V W + + FP+ +I W+ C+TT S+++ NG G+
Sbjct: 590 ISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGY 649
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F+ RGLRQG LSPYLFV+ M+ L+ + + A YH +C THL FADDL++
Sbjct: 650 FQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMV 709
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
S +S I+ V + F +GL ++ +KS ++LAG +E+A G L V
Sbjct: 710 LSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPV 769
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL++ RLS C PL+EQ+ KRI SW RFLSYAGRL L+ SVL SI +W F
Sbjct: 770 RYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAF 829
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
LP K ++ELE++C+ FLWSG + ++ + +SW +CKP EGGLG+ S+ + N
Sbjct: 830 RLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEAN 883
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 330 bits (847), Expect = 7e-88
Identities = 156/357 (43%), Positives = 232/357 (64%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RP+SCCNVIYKIISKI+ R+ V K + NQ+AF+K R + +N+LLA ELV++YHK+
Sbjct: 57 RPLSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKES 116
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
S + A+K+D+ KA+++V W + L + FP ++ W++ C++T S+++ NG VG+
Sbjct: 117 VSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGF 176
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F+ KRGLRQG LSPYLFV+ M+ L+ L + A YH RC + + THL FADDL++
Sbjct: 177 FQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMV 236
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
S +S I++V + F +GL+++ +KS I+LAG + EI G L V
Sbjct: 237 LSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPV 296
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL++ RL+ PL+E + K+I +W R+LSYAGRL L+ SVL SI +W F
Sbjct: 297 RYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAF 356
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWNHAA 1387
LP + ++E+++IC+ FLWSGPD + V W ++CKP EGGLG+ S+ + N +
Sbjct: 357 RLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVS 413
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 322 bits (826), Expect = 2e-85
Identities = 153/357 (42%), Positives = 232/357 (64%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPI+CC VIYKIISK+LT R+ + ++V QS FI GR+IADNILLA EL+R Y +K
Sbjct: 515 RPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKH 574
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
SP+ +KVD+ KAYD+V+W + L + FP R++ W+++CV+TVSY++ NG
Sbjct: 575 MSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQP 634
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F+ ++GLRQGDP+SP+LF L ME L+ +E + ++H +C + N THL FADDLL+
Sbjct: 635 FQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLM 694
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
F +A++ S + F +GL +H+KS I+ G D E+A + ++ G L
Sbjct: 695 FCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPF 754
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLG+PL S +L+ C+PLVE +T R +W + LSYAGRL+L+KS+L S++ YW + F
Sbjct: 755 RYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIF 814
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWNHAA 1387
L K ++ +E++C +FLW+G ++ + V+W I +P GG ++++ WN AA
Sbjct: 815 PLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAA 871
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 319 bits (817), Expect = 2e-84
Identities = 156/354 (44%), Positives = 226/354 (63%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISC N +YK+ISK+LT R+ + ++G +QSAF+ GR++A+N+LLA E+V Y++
Sbjct: 384 RPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLN 443
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
SP+ LKVDL KA+D+V W V A L A P+RYI+W+ +C+TT S+TIS NG+ G+
Sbjct: 444 ISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGF 503
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F +GLRQGDPLSPYLFVL ME + L + +G + YH + + +HL FADD++I
Sbjct: 504 FRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMI 563
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
F S I + L+ F D +GL+VN DKS +F AG D E + G GT +
Sbjct: 564 FFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLS-ERITSAAYGFPAGTFPI 622
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL+ +L PL+E+++ R+ SW + LS+AGR +L+ SV+ + +W F
Sbjct: 623 RYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTF 682
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
+LP +K++E +C++FLW+G +S VSW + C P EGGLG S +WN
Sbjct: 683 LLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWN 736
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 319 bits (817), Expect = 2e-84
Identities = 150/354 (42%), Positives = 229/354 (64%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNV+YK+ISKI+ R+ + + + NQSAF+K R + +N+LLA ELV++YHK
Sbjct: 177 RPISCCNVLYKVISKIIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDS 236
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
S + A+K+D+ KA+D+V W + L A F +I W+ C+TT S+++ NG VG+
Sbjct: 237 ISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGY 296
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F+ KRGLRQG LSPYLFV+ M+ L+ + + +H +C + THL FADDL++
Sbjct: 297 FQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMV 356
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
S +S IL+V + F +GL ++ +KS +++AG ++ EIA G L V
Sbjct: 357 LSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPV 416
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL++ RL+ PL+EQ+ KRI++W RF S+AGR L+KSVL SI +W F
Sbjct: 417 RYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAF 476
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
LP + ++E++++C+ FLWSG + + + +SW+ +CKP EGGLG+ ++ + N
Sbjct: 477 RLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEAN 530
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 319 bits (817), Expect = 2e-84
Identities = 156/354 (44%), Positives = 226/354 (63%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISC N +YK+ISK+LT R+ + ++G +QSAF+ GR++A+N+LLA E+V Y++
Sbjct: 384 RPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLN 443
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
SP+ LKVDL KA+D+V W V A L A P+RYI+W+ +C+TT S+TIS NG+ G+
Sbjct: 444 ISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGF 503
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F +GLRQGDPLSPYLFVL ME + L + +G + YH + + +HL FADD++I
Sbjct: 504 FRSTKGLRQGDPLSPYLFVLAMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMI 563
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
F S I + L+ F D +GL+VN DKS +F AG D E + G GT +
Sbjct: 564 FFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLS-ERITSAAYGFPAGTFPI 622
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL+ +L PL+E+++ R+ SW + LS+AGR +L+ SV+ + +W F
Sbjct: 623 RYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFGLINFWMSTF 682
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
+LP +K++E +C++FLW+G +S VSW + C P EGGLG S +WN
Sbjct: 683 LLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWN 736
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 319 bits (817), Expect = 2e-84
Identities = 151/354 (42%), Positives = 226/354 (63%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNV+YK+ISKIL R+ + + + NQS+F+K R + +N+LLA +LV++YHK
Sbjct: 83 RPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDS 142
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
S + A+K+D+ KA D+V W + L+A FP+ +I W+ C+TT S+++ NG G+
Sbjct: 143 ISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGF 202
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F+ RGLRQG LSPYLFV+ M+ L+ L + V G + YH C + THL FADDL+I
Sbjct: 203 FQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMI 262
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
+ +S I++V + F +GL+++ +KS IF AG ++ T G L +
Sbjct: 263 LTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPI 322
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL++ RLS PL+EQ+ KRI SW RFLS+AGR L+ S++ S +W F
Sbjct: 323 RYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAF 382
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
LP ++E+E++C+ FLWSG + + + +SW ++CKP EGGLG+ S+ + N
Sbjct: 383 QLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEAN 436
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 319 bits (817), Expect = 2e-84
Identities = 154/357 (43%), Positives = 225/357 (63%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNV+YKI+SK++ R+ ++ + NQSAFIK R + +N+LLA ELV++YHK+
Sbjct: 677 RPISCCNVLYKIVSKLMANRLKEILPASIAPNQSAFIKDRLMMENLLLASELVKDYHKES 736
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
S + ALK+D+ KA+D V W + L A P+ +I W+ C+ T S+++ NG G+
Sbjct: 737 ISSRSALKIDISKAFDFVQWPFLINVLKAIHLPEMFIHWIELCIGTASFSVQVNGELSGF 796
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F +RGLRQG LSPYL+V+ M L+ + + + YH RC N THLCFADD+++
Sbjct: 797 FRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMV 856
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
FS KS + L + F ++ L+++ +KS IF+AG + I GTL V
Sbjct: 857 FSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPV 916
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
KYLGLPLL+ R++ PLVE++ RI+SW RFLS+AGRL+L+KSVL SI +W F
Sbjct: 917 KYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVF 976
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWNHAA 1387
LP ++E+E++ + FLWSGPD + ++W E+CK EGGLG+ + + N +
Sbjct: 977 RLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVS 1033
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 316 bits (809), Expect = 2e-83
Identities = 155/354 (43%), Positives = 222/354 (62%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNV+YK ISKIL R+ ++ K + NQSAF+K R + +N+LLA ELV++YHK
Sbjct: 251 RPISCCNVLYKAISKILANRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDS 310
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
S + A+K+D+ KA+D++ W + L+A FP +I W+ C++T S++I NG G+
Sbjct: 311 ISTRCAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGY 370
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F RGLRQG LSPYLFV+ M+ L+ + + A YH RC THLCFADDL+I
Sbjct: 371 FRSARGLRQGCSLSPYLFVISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMI 430
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
+ +S I+ VLN F GL++ +K+ ++LAG +++ G L V
Sbjct: 431 LTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPV 490
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL++ RL+ PL++Q+ +RI W R+LS+AGRL L+ SVL SI +W F
Sbjct: 491 RYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAF 550
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
LP + + E+ RI + LWSGP+ + VSW+EICKP EGGLG+ S+ + N
Sbjct: 551 RLPRECINEINRISSALLWSGPELNPKKAKVSWDEICKPKKEGGLGLQSLREAN 604
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 662
Score = 315 bits (806), Expect = 4e-83
Identities = 148/354 (41%), Positives = 223/354 (62%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNV+YK+ISKI+ R+ +V + + NQSAFIK R + +N+LLA ELV++YHK
Sbjct: 48 RPISCCNVLYKVISKIIANRLKRVLPQFIAGNQSAFIKDRLLIENLLLATELVKDYHKDS 107
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
S + A+K+D+ KA+D+V W + L FPQ ++ W++ CVTT S+++ N G+
Sbjct: 108 VSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSVQVNRELAGY 167
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F RGLRQG L+PYLFV++M+ L+ YH +C THL FADD+++
Sbjct: 168 FNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMV 227
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
+ +S I++V + F +GL+++ K+ I+ AG + + E G L V
Sbjct: 228 LTDGKLRSLEGIVEVFDSFAKQSGLKISMAKTTIYFAGISKSVCKEFEDQFHFAVGRLPV 287
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YL LPL++ R + + PL+EQ+ +RI +W RFLSYAGRL LV SVL SI +W F
Sbjct: 288 RYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAF 347
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
LP + V+E++++C+ FLWSGP+ + + ++WE +C+P EGGLG+ SI + N
Sbjct: 348 RLPRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEAN 401
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 314 bits (805), Expect = 5e-83
Identities = 145/354 (40%), Positives = 225/354 (63%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNVIYK+ISKI+ R+ + + NQSAF++ R + +N+LLA ELV++YHK
Sbjct: 103 RPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDS 162
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
SP+ A+K+D+ KA+D+V W + L A FP+ + W+ C++T ++++ NG G+
Sbjct: 163 ISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGF 222
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F KRGLRQG LSPYLFV+ M L+ + + YH +C K + THLCFADDL++
Sbjct: 223 FGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMV 282
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
F ++S ++++ F +GL ++ +KS ++LAG + I + G L V
Sbjct: 283 FIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPV 342
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPLL+ +++ PL++++ +ISSW R LSYAGRL L+ SV++S+ +W +
Sbjct: 343 RYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAY 402
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
LP+ +KE+E++C+ FLWSGP+ + ++W +CK EGGLGI S+ + N
Sbjct: 403 RLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEAN 456
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 313 bits (803), Expect = 9e-83
Identities = 151/354 (42%), Positives = 230/354 (64%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISC N +YK+I+++LT R+ ++ ++ QSAF+ GR++A+N+LLA +LV Y+
Sbjct: 524 RPISCLNTLYKVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSN 583
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
SP+ LKVDL KA+D+V W V A L A P+++I+W+ +C++T ++T+S NG G+
Sbjct: 584 ISPRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGF 643
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F+ +GLRQGDPLSPYLFVL ME + L + ++GL+ YH + + + +HL FADD++I
Sbjct: 644 FKSTKGLRQGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMI 703
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
F S I + L+ F +GL+VN DKS ++LAG ++ LE G GTL +
Sbjct: 704 FFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQ-LESNANAAYGFPIGTLPI 762
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL++ +L +PL+E++T R SW + LS+AGR++L+ SV+ +W F
Sbjct: 763 RYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTF 822
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
+LP +K +E +C+RFLWSG +Q VSW +C P EGGLG+ + +WN
Sbjct: 823 LLPKGCIKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWN 876
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 313 bits (803), Expect = 9e-83
Identities = 148/354 (41%), Positives = 224/354 (63%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNV+YK+ISKIL R+ + + NQSAF+K R + +N+LLA ELV++YHK+
Sbjct: 827 RPISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKES 886
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
+P+ A+K+D+ KA+D+V W + L A FP+ + W+ C++T ++++ NG G+
Sbjct: 887 VTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGF 946
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F RGLRQG LSPYLFV+ M L+ + E + YH +C K THLCFADDL++
Sbjct: 947 FGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMV 1006
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
F ++ S +++V F +GL+++ +KS I+LAG + + G L V
Sbjct: 1007 FVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPV 1066
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPLL+ +++ PL+E + +ISSW R LSYAGRL L+ SV++SI +W +
Sbjct: 1067 RYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAY 1126
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
LP+ ++E+E++C+ FLWSGP + ++W IC+P EGGLGI S+ + N
Sbjct: 1127 RLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEAN 1180
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 310 bits (795), Expect = 7e-82
Identities = 152/342 (44%), Positives = 214/342 (62%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNV+YK+ISKI+ R+ V K + NQSAF+K R + +N+LLA E+V++YHK
Sbjct: 418 RPISCCNVLYKVISKIIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDS 477
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
S + ALK+D+ KA+D+V W + L A FP + W+ C+TT S+++ NG G
Sbjct: 478 VSSRCALKIDISKAFDSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGV 537
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F R LRQG LSPYLFV+ M+ L+ + + V A YH +C THL FADDL+I
Sbjct: 538 FSSARELRQGCSLSPYLFVISMDVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMI 597
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
S +S I+ VL F +GL+++ +KS ++LAG + EI G L V
Sbjct: 598 LSDGKVRSIDGIVKVLYEFAKWSGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPV 657
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL+S RL+ C PL+EQ+ K+I +W RFLS+AGRL L+ S L SI +W F
Sbjct: 658 RYLGLPLVSKRLTASDCLPLIEQLRKKIEAWTSRFLSFAGRLNLISSTLWSICNFWMAAF 717
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLE 1342
LP ++E++++C+ FLWSG + ++ + VSWE ICKP E
Sbjct: 718 RLPRACIREIDKLCSAFLWSGTELSSNKAKVSWEAICKPKKE 759
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 308 bits (788), Expect = 5e-81
Identities = 143/354 (40%), Positives = 224/354 (63%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNVIYK+ISKI+ R+ + + NQSAF++ R + +N+LLA ELV++YHK
Sbjct: 672 RPISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDS 731
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
SP+ A+K+D+ KA+D+V W + L A KFP+++ W+ C++T ++++ N G+
Sbjct: 732 ISPRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQAGF 791
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F KRGLRQG LSPYLFV+ M L+ + + YH +C K + THLCFADDL++
Sbjct: 792 FGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMV 851
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
F ++S ++++ F +GL ++ +KS ++LA + I + G L V
Sbjct: 852 FIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPV 911
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLG PLL+ +++ PL++++ +ISSW R LSYAGRL L+ SV++S+ +W +
Sbjct: 912 RYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAY 971
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
LP+ +KE+E++C+ FLWSGP+ + ++W +CK EGGLGI S+ + N
Sbjct: 972 RLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEAN 1025
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 304 bits (779), Expect = 5e-80
Identities = 152/355 (42%), Positives = 222/355 (62%), Gaps = 1/355 (0%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCN IYK+ISK+L R+ + + +QSAF+KGR + +N+LLA ELV+ + +
Sbjct: 523 RPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRLLTENVLLATELVQGFGQAN 582
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
S + LKVDL KA+D+V WG + L A P R+++W+ +C+T+ S++I+ +GS G+
Sbjct: 583 ISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGY 642
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F+G +GLRQGDPLSP LFV+ ME L+ L + K G + YH + ++ + L FADDL+I
Sbjct: 643 FKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMI 702
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAG-RDRGLEDEIATILGVRKGTLL 1033
F S R I VL F++L+GLE+N +KSA++ AG D ED +A G GT
Sbjct: 703 FYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTLA--FGFVNGTFP 760
Query: 1034 VKYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYC 1213
+YLGLPLL +L L++++ R + W + LS+AGRL+L+ SV+ S +W
Sbjct: 761 FRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSS 820
Query: 1214 FILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
FILP +K +E++C RFLW + + VSW+ C P EGGLG+ + WN
Sbjct: 821 FILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWN 875
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 304 bits (778), Expect = 7e-80
Identities = 150/354 (42%), Positives = 217/354 (61%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPISCCNV+YK ISK+L R+ + + + NQSAFI R + +N+LLA ELV++YHK
Sbjct: 796 RPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAFISDRLLMENLLLASELVKDYHKDG 855
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
SP+ A+K+DL KA+D+V W + L+A P+++I W+ C++T S+++ NG
Sbjct: 856 LSPRCAMKIDLSKAFDSVQWPFLLNTLAALDIPEKFIHWINLCISTASFSVQVNG----- 910
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
LRQG LSPYLFV+ M L+ + + YH RC THLCFADD+++
Sbjct: 911 ------LRQGCSLSPYLFVICMNVLSAMLDKGAVEKRFGYHPRCRNMGLTHLCFADDIMV 964
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
FS + S +L + F +GL ++ +KS +F+A I G+L V
Sbjct: 965 FSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPV 1024
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLGLPL++ R++ C PL+E++ RISSWK RFLSYAGRL+L+ SV+ S+ +W F
Sbjct: 1025 RYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAF 1084
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
LP ++E+E+I A FLWSG D + V+W ++CKP EGGLG+ S+ D N
Sbjct: 1085 RLPRACIREIEQISAAFLWSGTDLNPHKAKVAWHDVCKPKSEGGLGLRSLVDAN 1138
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 300 bits (768), Expect = 1e-78
Identities = 143/354 (40%), Positives = 221/354 (62%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RP++CC IYK+I++I++ R+ + V NQ FIKGR + +N+LLA ELV N+
Sbjct: 524 RPVACCTTIYKVITRIISRRLKLFIDQAVQANQVGFIKGRLLCENVLLASELVDNFEADG 583
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
+ + L+VD+ KAYD V+W + L A P +I W+ C+++ SY+I+FNG +G+
Sbjct: 584 ETTRGCLQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGF 643
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F+GK+G+RQGDP+S +LFVL+M+ L+ GL + H C THL FADD+L+
Sbjct: 644 FQGKKGIRQGDPMSSHLFVLVMDVLSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLV 703
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
FS S IL +L+ FR +GL +N +K+ + L G + +A LG+ G+L V
Sbjct: 704 FSDGAASSIAGILTILDDFRQGSGLGINREKTELLLDGGNFARNRSLADNLGITHGSLPV 763
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLG+PL+S ++ + QPLV+++ R +SW R LS+AGRL+L+KSV+ S +W F
Sbjct: 764 RYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVF 823
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWN 1378
I P++ +++LE++C FLWSG + +SW +C P GGLG+ ++ WN
Sbjct: 824 IFPNQCLQKLEQMCNAFLWSGAPNSARGAKISWNIVCSPKEAGGLGLKRLSSWN 877
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 299 bits (765), Expect = 2e-78
Identities = 148/357 (41%), Positives = 224/357 (62%)
Frame = +2
Query: 317 RPISCCNVIYKIISKILTLRISQVTHKLVGLNQSAFIKGRNIADNILLAHELVRNYHKKI 496
RPI+CC+ +YKIISKILT R+ V ++V Q+ FI R+I DNILLA EL+R Y+++
Sbjct: 518 RPIACCSTLYKIISKILTKRLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRH 577
Query: 497 TSPKVALKVDLMKAYDTVDWGAVHACLSAYKFPQRYIDWVLKCVTTVSYTISFNGSFVGW 676
SP+ +KVD+ KAYD+V+W + + L FP +I W++ CV TVSY+I NG
Sbjct: 578 VSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIP 637
Query: 677 FEGKRGLRQGDPLSPYLFVLIMETLNPLFQEKVQAGLLDYHQRCNKQNKTHLCFADDLLI 856
F+ ++GLRQGDPLSP+LF L ME L+ + ++H +C + THL FADDLL+
Sbjct: 638 FDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLM 697
Query: 857 FSKANRKSARAILDVLNHFRDLTGLEVNHDKSAIFLAGRDRGLEDEIATILGVRKGTLLV 1036
F++A+ S I+ N F +GL+ + +KS I+ G +++A + + G+L
Sbjct: 698 FARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPF 757
Query: 1037 KYLGLPLLSTRLSPRHCQPLVEQMTKRISSWKGRFLSYAGRLELVKSVLLSIKVYWCYCF 1216
+YLG+PL S +L+ C+PL++++T R W LSYAGRL+LVK++L S++ YW F
Sbjct: 758 RYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIF 817
Query: 1217 ILPSKAVKELERICARFLWSGPDKQNSNSAVSWEEICKPYLEGGLGIVSITDWNHAA 1387
LP K +K +E C +FLW+G + + V+W+ + +P GGL + ++ WN AA
Sbjct: 818 PLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAA 874