BLASTX nr result
ID: Akebia25_contig00039492
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00039492
(819 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEZ48742.1| hypothetical chloroplast RF2, partial [Kingia aus... 72 2e-10
ref|YP_006666353.1| Ycf2 (chloroplast) [Pachycladon enysii] gi|4... 72 3e-10
ref|YP_006666335.1| Ycf2 (chloroplast) [Pachycladon enysii] gi|4... 72 3e-10
ref|YP_398372.1| Ycf2 [Lactuca sativa] gi|81176311|ref|YP_398388... 71 4e-10
gb|AEK71786.1| hypothetical chloroplast RF2 [Tradescantia ohiens... 71 5e-10
ref|YP_009019835.1| Ycf2 (chloroplast) [Vitis rotundifolia] gi|5... 70 7e-10
gb|AHA13226.1| hypothetical chloroplast RF21 [Thaumatococcus dan... 70 7e-10
ref|YP_008854638.1| hypothetical chloroplast RF21 [Curcuma rosco... 70 7e-10
gb|AHA12968.1| hypothetical chloroplast RF21 [Monocostus uniflor... 70 7e-10
ref|YP_008854469.1| hypothetical chloroplast RF21 [Musa textilis... 70 7e-10
emb|CCW72420.1| ycf2 (chloroplast) [Musa acuminata subsp. malacc... 70 7e-10
gb|AGE93499.1| hypothetical chloroplast RF21 [Xiphidium caeruleu... 70 7e-10
gb|AGE93413.1| hypothetical chloroplast RF21 [Alpinia zerumbet] ... 70 7e-10
ref|YP_007475680.1| hypothetical chloroplast RF21 [Heliconia col... 70 7e-10
ref|YP_007475663.1| hypothetical chloroplast RF21 [Heliconia col... 70 7e-10
gb|AEZ48752.1| hypothetical chloroplast RF2, partial [Renealmia ... 70 7e-10
ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata] gi|317... 70 7e-10
ref|YP_005089995.1| ycf2 gene product (chloroplast) [Brassica na... 70 7e-10
gb|ABU85421.1| hypothetical protein RF2 [Musa acuminata] 70 7e-10
gb|ABN15093.1| ycf2 [Brassica rapa] 70 7e-10
>gb|AEZ48742.1| hypothetical chloroplast RF2, partial [Kingia australis]
gi|392841382|gb|AFM83337.1| hypothetical chloroplast
RF21 (chloroplast) [Kingia australis]
gi|392841400|gb|AFM83355.1| hypothetical chloroplast
RF21 (chloroplast) [Kingia australis]
Length = 2303
Score = 72.0 bits (175), Expect = 2e-10
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEF WN TRSIRSFFSDRW E LGSNP ER TRD+K +K+K +SF
Sbjct: 487 IEEFFWNPTRSIRSFFSDRWSELHLGSNPTERSTRDQKFLKKKQDVSF 534
>ref|YP_006666353.1| Ycf2 (chloroplast) [Pachycladon enysii] gi|401786787|gb|AFQ07853.1|
Ycf2 (chloroplast) [Pachycladon enysii]
Length = 2291
Score = 71.6 bits (174), Expect = 3e-10
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +2
Query: 395 EEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
EEFLWN TR+IRSFFSDRW E LGSNP ER TRD+KL+K++ +SF
Sbjct: 483 EEFLWNPTRAIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSF 529
>ref|YP_006666335.1| Ycf2 (chloroplast) [Pachycladon enysii] gi|401786769|gb|AFQ07835.1|
Ycf2 (chloroplast) [Pachycladon enysii]
Length = 2291
Score = 71.6 bits (174), Expect = 3e-10
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +2
Query: 395 EEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
EEFLWN TR+IRSFFSDRW E LGSNP ER TRD+KL+K++ +SF
Sbjct: 483 EEFLWNPTRAIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSF 529
>ref|YP_398372.1| Ycf2 [Lactuca sativa] gi|81176311|ref|YP_398388.1| Ycf2 [Lactuca
sativa] gi|109896301|sp|Q332R7.1|YCF2_LACSA RecName:
Full=Protein Ycf2 gi|78675213|dbj|BAE47639.1| ycf2
protein [Lactuca sativa] gi|78675229|dbj|BAE47655.1|
ycf2 [Lactuca sativa] gi|88657026|gb|ABD47276.1|
hypothetical chloroplast RF2 (chloroplast) [Lactuca
sativa] gi|88657046|gb|ABD47296.1| hypothetical
chloroplast RF2 (chloroplast) [Lactuca sativa]
Length = 2264
Score = 71.2 bits (173), Expect = 4e-10
Identities = 37/65 (56%), Positives = 46/65 (70%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISFF*K*LEFYQINE 571
+EEFL N TRS+RSFFSDRW EF LGSNP ER TRD+KL+K++ +SF + +N
Sbjct: 480 IEEFLGNPTRSVRSFFSDRWSEFHLGSNPTERSTRDQKLLKKQQDLSFLRRSENKEMVNL 539
Query: 572 VKSIT 586
K IT
Sbjct: 540 FKIIT 544
>gb|AEK71786.1| hypothetical chloroplast RF2 [Tradescantia ohiensis]
gi|374411526|gb|AEZ48755.1| hypothetical chloroplast
RF2, partial [Tradescantia ohiensis]
Length = 2278
Score = 70.9 bits (172), Expect = 5e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 480 IEEFLGNPTRSIRSFFSDRWAELHLGSNPIERSTRDQKFLKKKQDVSF 527
>ref|YP_009019835.1| Ycf2 (chloroplast) [Vitis rotundifolia]
gi|595789657|ref|YP_009019852.1| Ycf2 (chloroplast)
[Vitis rotundifolia] gi|586947457|gb|AHJ91254.1| Ycf2
(chloroplast) [Vitis rotundifolia]
gi|586947474|gb|AHJ91271.1| Ycf2 (chloroplast) [Vitis
rotundifolia]
Length = 2300
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+KL+K++ +SF
Sbjct: 482 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKLLKKQQDVSF 529
>gb|AHA13226.1| hypothetical chloroplast RF21 [Thaumatococcus daniellii]
Length = 2277
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 455 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 502
>ref|YP_008854638.1| hypothetical chloroplast RF21 [Curcuma roscoeana]
gi|567853753|ref|YP_008854655.1| hypothetical
chloroplast RF21 [Curcuma roscoeana]
gi|557637545|gb|AHA13140.1| hypothetical chloroplast
RF21 [Curcuma roscoeana] gi|557637563|gb|AHA13158.1|
hypothetical chloroplast RF21 [Curcuma roscoeana]
Length = 2269
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 484 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 531
>gb|AHA12968.1| hypothetical chloroplast RF21 [Monocostus uniflorus]
gi|557637389|gb|AHA12986.1| hypothetical chloroplast
RF21 [Monocostus uniflorus]
Length = 2293
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 480 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 527
>ref|YP_008854469.1| hypothetical chloroplast RF21 [Musa textilis]
gi|563940614|ref|YP_008854486.1| hypothetical
chloroplast RF21 [Musa textilis]
gi|557636956|gb|AHA12558.1| hypothetical chloroplast
RF21 [Musa textilis] gi|557636974|gb|AHA12576.1|
hypothetical chloroplast RF21 [Musa textilis]
Length = 2307
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 476 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 523
>emb|CCW72420.1| ycf2 (chloroplast) [Musa acuminata subsp. malaccensis]
gi|525312522|emb|CCW72445.1| ycf2 (chloroplast) [Musa
acuminata subsp. malaccensis]
Length = 2336
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 496 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 543
>gb|AGE93499.1| hypothetical chloroplast RF21 [Xiphidium caeruleum]
gi|449326941|gb|AGE93518.1| hypothetical chloroplast
RF21 [Xiphidium caeruleum]
Length = 2288
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 480 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 527
>gb|AGE93413.1| hypothetical chloroplast RF21 [Alpinia zerumbet]
gi|449326854|gb|AGE93432.1| hypothetical chloroplast
RF21 [Alpinia zerumbet]
Length = 2267
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 480 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 527
>ref|YP_007475680.1| hypothetical chloroplast RF21 [Heliconia collinsiana]
gi|449326160|gb|AGE92746.1| hypothetical chloroplast
RF21 [Heliconia collinsiana]
Length = 2296
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 477 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 524
>ref|YP_007475663.1| hypothetical chloroplast RF21 [Heliconia collinsiana]
gi|449326141|gb|AGE92727.1| hypothetical chloroplast
RF21 [Heliconia collinsiana]
Length = 2288
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 477 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 524
>gb|AEZ48752.1| hypothetical chloroplast RF2, partial [Renealmia alpinia]
Length = 2260
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 484 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 531
>ref|YP_004072505.1| Ycf2 protein [Corynocarpus laevigata]
gi|317046232|ref|YP_004072521.1| Ycf2 protein
[Corynocarpus laevigata] gi|309252933|gb|ADO60353.1|
Ycf2 protein [Corynocarpus laevigata]
gi|309252949|gb|ADO60369.1| Ycf2 protein [Corynocarpus
laevigata]
Length = 2316
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+KL+K++ +SF
Sbjct: 487 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKLLKKEQDVSF 534
>ref|YP_005089995.1| ycf2 gene product (chloroplast) [Brassica napus]
gi|383930512|ref|YP_005090015.1| ycf2 gene product
(chloroplast) [Brassica napus]
gi|262400748|gb|ACY66237.1| ycf2 [Brassica napus]
gi|262400809|gb|ACY66298.1| Ycf2 [Brassica napus]
Length = 2287
Score = 70.5 bits (171), Expect = 7e-10
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +2
Query: 395 EEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
EEF WN TR+IRSFFSDRW E LGSNP ER TRD+KL+K++ +SF
Sbjct: 483 EEFFWNSTRAIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSF 529
>gb|ABU85421.1| hypothetical protein RF2 [Musa acuminata]
Length = 2317
Score = 70.5 bits (171), Expect = 7e-10
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +2
Query: 392 LEEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
+EEFL N TRSIRSFFSDRW E LGSNPIER TRD+K +K+K +SF
Sbjct: 496 IEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKFLKKKQDVSF 543
>gb|ABN15093.1| ycf2 [Brassica rapa]
Length = 300
Score = 70.5 bits (171), Expect = 7e-10
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = +2
Query: 395 EEFLWNYTRSIRSFFSDRWLEFDLGSNPIERFTRDEKLVKEK*AISF 535
EEF WN TR+IRSFFSDRW E LGSNP ER TRD+KL+K++ +SF
Sbjct: 27 EEFFWNSTRAIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSF 73