BLASTX nr result
ID: Akebia25_contig00039345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00039345
(274 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB76229.1| DNA repair protein RAD51-3-like protein [Morus no... 103 2e-20
ref|XP_002511689.1| DNA repair and recombination protein radA, p... 101 9e-20
ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ... 97 3e-18
ref|XP_007220405.1| hypothetical protein PRUPE_ppa007713mg [Prun... 94 2e-17
ref|XP_006345516.1| PREDICTED: DNA repair protein RAD51 homolog ... 91 2e-16
ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog ... 91 2e-16
ref|XP_004240049.1| PREDICTED: DNA repair protein RAD51 homolog ... 90 4e-16
ref|XP_006295175.1| hypothetical protein CARUB_v10024254mg [Caps... 89 5e-16
ref|XP_004506531.1| PREDICTED: DNA repair protein RAD51 homolog ... 86 7e-15
gb|EYU31979.1| hypothetical protein MIMGU_mgv1a026763mg [Mimulus... 84 3e-14
gb|ADE75901.1| unknown [Picea sitchensis] 84 3e-14
ref|XP_004306934.1| PREDICTED: DNA repair protein RAD51 homolog ... 83 5e-14
ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic... 82 6e-14
dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombinat... 82 8e-14
ref|NP_566040.1| DNA repair protein RAD51 homolog 3 [Arabidopsis... 82 8e-14
emb|CAC14091.1| RAD51C protein [Arabidopsis thaliana] 82 8e-14
dbj|BAB70685.1| AtRAD51Cbeta [Arabidopsis thaliana] 82 8e-14
gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana] 82 8e-14
ref|XP_006857819.1| hypothetical protein AMTR_s00069p00024300 [A... 81 1e-13
ref|XP_006397706.1| hypothetical protein EUTSA_v10001529mg [Eutr... 80 2e-13
>gb|EXB76229.1| DNA repair protein RAD51-3-like protein [Morus notabilis]
Length = 346
Score = 103 bits (257), Expect = 2e-20
Identities = 54/91 (59%), Positives = 66/91 (72%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
SS+SP DLAR+LNV++ EAL+I+KVA +SR DR D + I GAQ+AWDML EE+ + R
Sbjct: 28 SSLSPSDLARELNVTNSEALEILKVASLNSRLDRTDGGHAIFNGAQTAWDMLHEEQLLRR 87
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC NCKEVTEIGGVPGIG
Sbjct: 88 ITTSCADLDNILGGGINCKEVTEIGGVPGIG 118
>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
communis] gi|223548869|gb|EEF50358.1| DNA repair and
recombination protein radA, putative [Ricinus communis]
Length = 346
Score = 101 bits (252), Expect = 9e-20
Identities = 51/91 (56%), Positives = 65/91 (71%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
SSVSP DLARDL +S EAL+I+KVA ++SR D ++ + +I GAQ+AW+ML EE +TR
Sbjct: 28 SSVSPSDLARDLKISDSEALEILKVASRNSRLDGMEGCHAVINGAQNAWEMLHEESSLTR 87
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC CKEVTEIGG+PGIG
Sbjct: 88 ITTSCADLDNILGGGITCKEVTEIGGLPGIG 118
>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
gi|296089196|emb|CBI38899.3| unnamed protein product
[Vitis vinifera]
Length = 346
Score = 96.7 bits (239), Expect = 3e-18
Identities = 49/91 (53%), Positives = 63/91 (69%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
SS+SP LA+DL +S +EAL+I++V Q SR D+ D ++ I+ GAQ+AWDML EEE +
Sbjct: 28 SSLSPSTLAQDLKISDNEALEILRVVSQGSRLDKPDGSHAIVNGAQTAWDMLHEEESLKC 87
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC CKEVTEIGGVPGIG
Sbjct: 88 ITTSCVDLDDILGGGIKCKEVTEIGGVPGIG 118
>ref|XP_007220405.1| hypothetical protein PRUPE_ppa007713mg [Prunus persica]
gi|462416867|gb|EMJ21604.1| hypothetical protein
PRUPE_ppa007713mg [Prunus persica]
Length = 358
Score = 94.4 bits (233), Expect = 2e-17
Identities = 49/91 (53%), Positives = 60/91 (65%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
SS+S DLARDL + EA +I+KVA R D+ D++N I GAQ+AW+ML EE+ R
Sbjct: 28 SSLSSSDLARDLKIPESEAFEILKVASHDCRLDQPDKSNGIFTGAQTAWEMLHEEQLFPR 87
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC NCKEVTEIGGVPGIG
Sbjct: 88 ITTSCADLDNILGGGINCKEVTEIGGVPGIG 118
>ref|XP_006345516.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Solanum
tuberosum]
Length = 346
Score = 90.9 bits (224), Expect = 2e-16
Identities = 47/90 (52%), Positives = 63/90 (70%)
Frame = -1
Query: 271 SVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITRI 92
SVS D+ARDL +S +EAL+I++VA Q +R + T+ I+ GAQSAW+ML EE+ + RI
Sbjct: 29 SVSHSDIARDLKISENEALEILRVASQRRGSERSNGTSSIVNGAQSAWEMLNEEKSLGRI 88
Query: 91 STSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
+TSC +C+EVTEIGGVPGIG
Sbjct: 89 TTSCSELDDILGGGISCREVTEIGGVPGIG 118
>ref|XP_004133923.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Cucumis
sativus] gi|449480051|ref|XP_004155785.1| PREDICTED: DNA
repair protein RAD51 homolog 3-like [Cucumis sativus]
Length = 346
Score = 90.9 bits (224), Expect = 2e-16
Identities = 46/91 (50%), Positives = 61/91 (67%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
+SVSP DLAR+L +S++EA ++K+A DR D + I+ GA++AWDML +E+FI R
Sbjct: 28 ASVSPSDLARELEISNNEAFDVLKLASHGRGLDRSDGSGAIVNGAETAWDMLHKEQFIPR 87
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC N EVTEIGGVPGIG
Sbjct: 88 ITTSCADLDNLLGGGINVSEVTEIGGVPGIG 118
>ref|XP_004240049.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Solanum
lycopersicum]
Length = 346
Score = 89.7 bits (221), Expect = 4e-16
Identities = 46/90 (51%), Positives = 63/90 (70%)
Frame = -1
Query: 271 SVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITRI 92
SVS D+ARDL +S ++AL+I++VA + +R + T+ I+ GAQSAW+ML EE+ + RI
Sbjct: 29 SVSHSDVARDLKISENQALEILRVASRRRGSERSNGTSSIVNGAQSAWEMLNEEKLLGRI 88
Query: 91 STSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
+TSC +CKEVTEIGGVPGIG
Sbjct: 89 TTSCSELDDILGGGISCKEVTEIGGVPGIG 118
>ref|XP_006295175.1| hypothetical protein CARUB_v10024254mg [Capsella rubella]
gi|482563883|gb|EOA28073.1| hypothetical protein
CARUB_v10024254mg [Capsella rubella]
Length = 150
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/91 (50%), Positives = 62/91 (68%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
SSVS DLARD+N++ EA +I+K+A QSS + + +I GA++AWDML EEE + R
Sbjct: 28 SSVSSSDLARDVNITEDEAFEILKLANQSSGSSSCNGSRSLINGAKNAWDMLHEEESLPR 87
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC +C++VTEIGGVPGIG
Sbjct: 88 ITTSCSDLDNILGGGISCRDVTEIGGVPGIG 118
>ref|XP_004506531.1| PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1
[Cicer arietinum] gi|502146618|ref|XP_004506532.1|
PREDICTED: DNA repair protein RAD51 homolog 3-like
isoform X2 [Cicer arietinum]
gi|502146620|ref|XP_004506533.1| PREDICTED: DNA repair
protein RAD51 homolog 3-like isoform X3 [Cicer
arietinum]
Length = 347
Score = 85.5 bits (210), Expect = 7e-15
Identities = 48/89 (53%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = -1
Query: 265 SPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNV-IIAGAQSAWDMLCEEEFITRIS 89
SP LARD+ VS EAL+I+ VA ++S DR +N II G Q+AWDM EE F + I+
Sbjct: 31 SPTHLARDIEVSESEALEILNVATRTSTLDRSCGSNTNIIDGGQTAWDMFNEERFSSLIT 90
Query: 88 TSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
TSC NCKEVTEIGGVPGIG
Sbjct: 91 TSCVDLDNILGGGINCKEVTEIGGVPGIG 119
>gb|EYU31979.1| hypothetical protein MIMGU_mgv1a026763mg [Mimulus guttatus]
Length = 348
Score = 83.6 bits (205), Expect = 3e-14
Identities = 45/92 (48%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQ-TNVIIAGAQSAWDMLCEEEFIT 98
SSVSP LA+DL +S +EA +I+K+A + S ++++ ++ I+ GAQ+AW+ML EEE
Sbjct: 28 SSVSPSRLAQDLKISENEAAEILKIASRRSGLEKIETGSHPIMNGAQTAWEMLHEEESSI 87
Query: 97 RISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC CKEVTEIGGVPGIG
Sbjct: 88 CITTSCSDLDEILGGGIRCKEVTEIGGVPGIG 119
>gb|ADE75901.1| unknown [Picea sitchensis]
Length = 346
Score = 83.6 bits (205), Expect = 3e-14
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNV-IIAGAQSAWDMLCEEEFIT 98
+++SPLDLARD+ VS EAL I+KVA ++ D ++AGA++AWD+LCEE+ +
Sbjct: 28 NNLSPLDLARDIGVSSEEALDILKVAWRTKAIDGNSPKGANLLAGAKTAWDLLCEEKTMK 87
Query: 97 RISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
RI T C KEVTE+GGVPGIG
Sbjct: 88 RIVTFCEDLDVILGGGICRKEVTEVGGVPGIG 119
>ref|XP_004306934.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Fragaria vesca
subsp. vesca]
Length = 346
Score = 82.8 bits (203), Expect = 5e-14
Identities = 43/91 (47%), Positives = 58/91 (63%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
S +SP LARDL V EA +I++VA S ++ D+ ++ G Q+AW++L EE+ + R
Sbjct: 28 SRLSPSHLARDLKVPEAEAYEILRVASLGSGLEQPDKHTALVNGGQTAWEILNEEKLLPR 87
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC NCKEVTEIGGVPGIG
Sbjct: 88 ITTSCADLDYILGGGINCKEVTEIGGVPGIG 118
>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355506214|gb|AES87356.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
Length = 347
Score = 82.4 bits (202), Expect = 6e-14
Identities = 46/89 (51%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = -1
Query: 265 SPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNV-IIAGAQSAWDMLCEEEFITRIS 89
S LARD+ VS EAL+I+ A +SS D+ +N +I G Q+AWDML EE F + I+
Sbjct: 31 STTHLARDIEVSESEALEILNFATRSSDLDKSSGSNANVIHGGQTAWDMLNEERFSSLIT 90
Query: 88 TSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
TSC NCKEVTEIGGVPGIG
Sbjct: 91 TSCLDLDNILGGGINCKEVTEIGGVPGIG 119
>dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombination factor
[Arabidopsis thaliana]
Length = 342
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
+SVS DLARD N++ EA +I+K+A QS + + +I GA++AWDML EEE + R
Sbjct: 28 ASVSSSDLARDANITEEEAFEILKLANQSC----CNGSRSLINGAKNAWDMLHEEESLPR 83
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC +C++VTEIGGVPGIG
Sbjct: 84 ITTSCSDLDNILGGGISCRDVTEIGGVPGIG 114
>ref|NP_566040.1| DNA repair protein RAD51 homolog 3 [Arabidopsis thaliana]
gi|55583940|sp|Q8GXF0.2|RA51C_ARATH RecName: Full=DNA
repair protein RAD51 homolog 3; AltName: Full=DNA
repair-recombination protein RAD51C; Short=AtRAD51C
gi|11064475|emb|CAC14294.1| Rad51C protein [Arabidopsis
thaliana] gi|15425731|dbj|BAB64343.1| AtRAD51Calpha
[Arabidopsis thaliana] gi|20196911|gb|AAB82635.2|
putative RAD51C-like DNA repair protein [Arabidopsis
thaliana] gi|330255439|gb|AEC10533.1| DNA repair protein
RAD51 homolog 3 [Arabidopsis thaliana]
Length = 363
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
+SVS DLARD N++ EA +I+K+A QS + + +I GA++AWDML EEE + R
Sbjct: 49 ASVSSSDLARDANITEEEAFEILKLANQSC----CNGSRSLINGAKNAWDMLHEEESLPR 104
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC +C++VTEIGGVPGIG
Sbjct: 105 ITTSCSDLDNILGGGISCRDVTEIGGVPGIG 135
>emb|CAC14091.1| RAD51C protein [Arabidopsis thaliana]
Length = 363
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
+SVS DLARD N++ EA +I+K+A QS + + +I GA++AWDML EEE + R
Sbjct: 49 ASVSSSDLARDANITEEEAFEILKLANQSC----CNGSRSLINGAKNAWDMLHEEESLPR 104
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC +C++VTEIGGVPGIG
Sbjct: 105 ITTSCSDLDNILGGGISCRDVTEIGGVPGIG 135
>dbj|BAB70685.1| AtRAD51Cbeta [Arabidopsis thaliana]
Length = 241
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
+SVS DLARD N++ EA +I+K+A QS + + +I GA++AWDML EEE + R
Sbjct: 49 ASVSSSDLARDANITEEEAFEILKLANQSC----CNGSRSLINGAKNAWDMLHEEESLPR 104
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC +C++VTEIGGVPGIG
Sbjct: 105 ITTSCSDLDNILGGGISCRDVTEIGGVPGIG 135
>gb|AAL84941.1| At2g45280/F4L23.21 [Arabidopsis thaliana]
Length = 363
Score = 82.0 bits (201), Expect = 8e-14
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
+SVS DLARD N++ EA +I+K+A QS + + +I GA++AWDML EEE + R
Sbjct: 49 ASVSSSDLARDANITEEEAFEILKLANQSC----CNGSRSLINGAKNAWDMLHEEESLPR 104
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC +C++VTEIGGVPGIG
Sbjct: 105 ITTSCSDLDNILGGGISCRDVTEIGGVPGIG 135
>ref|XP_006857819.1| hypothetical protein AMTR_s00069p00024300 [Amborella trichopoda]
gi|548861921|gb|ERN19286.1| hypothetical protein
AMTR_s00069p00024300 [Amborella trichopoda]
Length = 342
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/91 (45%), Positives = 57/91 (62%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
S +SP LA DL+VS EA +++V Q+ + D I+AGAQ+AWD+LCE+ +
Sbjct: 28 SHLSPSALAADLDVSPQEASDVLRVVTQAGMMRKPDS---IVAGAQTAWDILCEDRTMNH 84
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC +CKE+TE+GGVPGIG
Sbjct: 85 ITTSCEDLDGILGGGISCKEITEVGGVPGIG 115
>ref|XP_006397706.1| hypothetical protein EUTSA_v10001529mg [Eutrema salsugineum]
gi|557098779|gb|ESQ39159.1| hypothetical protein
EUTSA_v10001529mg [Eutrema salsugineum]
Length = 344
Score = 80.5 bits (197), Expect = 2e-13
Identities = 44/91 (48%), Positives = 60/91 (65%)
Frame = -1
Query: 274 SSVSPLDLARDLNVSHHEALQIIKVALQSSRFDRLDQTNVIIAGAQSAWDMLCEEEFITR 95
SSVS DLARD+N++ EA I+K+ Q S + ++ +I GA++AWDML EEE + R
Sbjct: 29 SSVSSTDLARDVNITEAEAFDILKLVNQISGSNG---SSSLINGAKNAWDMLHEEESLPR 85
Query: 94 ISTSCXXXXXXXXXXXNCKEVTEIGGVPGIG 2
I+TSC +C++VTEIGGVPGIG
Sbjct: 86 ITTSCSDLDSILGGGISCRDVTEIGGVPGIG 116