BLASTX nr result
ID: Akebia25_contig00038962
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00038962
(402 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC35988.1| DNA-directed RNA polymerase subunit beta'' [Morus... 49 4e-08
ref|YP_002836080.1| RNA polymerase beta'' subunit [Megaleranthis... 50 2e-07
gb|ABV65720.1| RNA polymerase beta'' subunit, partial (chloropla... 50 3e-07
ref|YP_008994280.1| RNA polymerase beta' subunit [Melianthus vil... 48 4e-07
ref|YP_001294260.1| RNA polymerase beta' subunit [Illicium oliga... 49 4e-07
gb|ABV65756.1| RNA polymerase beta'' subunit, partial (chloropla... 48 4e-07
ref|YP_009026430.1| RNA polymerase beta'' subunit (chloroplast) ... 47 5e-07
gb|AFJ80058.1| RNA polymerase beta subunit, partial (chloroplast... 47 5e-07
gb|AFJ73380.1| RNA polymerase beta subunit, partial (chloroplast... 47 5e-07
gb|AFU94778.1| RpoC2, partial (chloroplast) [Bhesa sp. CCD-2012] 48 6e-07
gb|ABV65764.1| RNA polymerase beta'' subunit, partial (chloropla... 50 6e-07
ref|YP_009024783.1| RNA polymerase beta' subunit (chloroplast) [... 47 8e-07
ref|YP_784376.1| RNA polymerase beta' subunit [Drimys granadensi... 48 8e-07
gb|ABV65726.1| RNA polymerase beta'' subunit, partial (chloropla... 48 8e-07
ref|YP_008081876.1| DNA-directed RNA polymerase beta'' chain (ch... 47 9e-07
gb|AGK25707.1| DNA-directed RNA polymerase beta'' chain (chlorop... 47 9e-07
ref|YP_008081720.1| DNA-directed RNA polymerase beta'' chain (ch... 47 9e-07
ref|YP_008081642.1| DNA-directed RNA polymerase beta'' chain (ch... 47 9e-07
gb|AFJ80055.1| RNA polymerase beta subunit, partial (chloroplast... 47 9e-07
gb|AFJ73384.1| RNA polymerase beta subunit, partial (chloroplast... 47 9e-07
>gb|EXC35988.1| DNA-directed RNA polymerase subunit beta'' [Morus notabilis]
Length = 411
Score = 48.5 bits (114), Expect(3) = 4e-08
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +3
Query: 225 IYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
IYLYVT+ +DI++NV + KS ILVQNDQ+VES Q+
Sbjct: 263 IYLYVTIESEDIIHNVTIPPKSFILVQNDQYVESEQV 299
Score = 29.6 bits (65), Expect(3) = 4e-08
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KFN++LVHPTRT H
Sbjct: 236 SNGKIKFNEDLVHPTRTRH 254
Score = 23.9 bits (50), Expect(3) = 4e-08
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH F+ IY Y+
Sbjct: 248 HPTRTRHGHPAFLCSIYLYV 267
>ref|YP_002836080.1| RNA polymerase beta'' subunit [Megaleranthis saniculifolia]
gi|226933872|gb|ACO92005.1| RNA polymerase beta''
subunit [Megaleranthis saniculifolia]
Length = 1383
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ YI LYVT+ GQDIL+NV + KS ILV+NDQ+VES Q+
Sbjct: 379 FLCYIDLYVTIEGQDILHNVNIPPKSFILVKNDQYVESEQV 419
Score = 31.2 bits (69), Expect(2) = 2e-07
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLHVMGIVPLFFLYI 229
+N KFN++LVHPTRT H P F YI
Sbjct: 356 DNGKIKFNEDLVHPTRTRHG---YPAFLCYI 383
>gb|ABV65720.1| RNA polymerase beta'' subunit, partial (chloroplast) [Cephalotus
follicularis]
Length = 1257
Score = 50.1 bits (118), Expect(2) = 3e-07
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ YI LYVT+ G+DIL+NV + KS +LVQNDQ+VES Q+
Sbjct: 349 FLCYIDLYVTIEGEDILHNVTIPPKSFLLVQNDQYVESEQV 389
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLHVMGIVPLFFLYI 229
+N +FN++LVHPTRT H P F YI
Sbjct: 326 SNAKVQFNEDLVHPTRTRHGH---PAFLCYI 353
>ref|YP_008994280.1| RNA polymerase beta' subunit [Melianthus villosus]
gi|527355130|gb|AGS12999.1| RNA polymerase beta' subunit
[Melianthus villosus]
Length = 1398
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ YI LYVT+ +DI++NV + KS ILVQNDQ+VES Q+
Sbjct: 379 FICYIDLYVTIESEDIIHNVTIPPKSFILVQNDQYVESEQV 419
Score = 31.6 bits (70), Expect(2) = 4e-07
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLHVMGIVPLFFLYI 229
+N KFN++LVHPTRT H P F YI
Sbjct: 356 SNGKMKFNEDLVHPTRTRHGH---PAFICYI 383
>ref|YP_001294260.1| RNA polymerase beta' subunit [Illicium oligandrum]
gi|212288322|sp|A6MMT4.1|RPOC2_ILLOL RecName:
Full=DNA-directed RNA polymerase subunit beta'';
AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
polymerase subunit beta''; Short=RNA polymerase subunit
beta'' gi|147917385|gb|ABQ52509.1| RNA polymerase beta'
subunit [Illicium oligandrum]
Length = 1385
Score = 48.9 bits (115), Expect(2) = 4e-07
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ YI LYVT+ QDIL+NV + KS ILVQNDQ+VES Q+
Sbjct: 382 FLCYIDLYVTIESQDILHNVNIPPKSFILVQNDQYVESEQV 422
Score = 30.4 bits (67), Expect(2) = 4e-07
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +2
Query: 140 NKSKKFNKNLVHPTRTLHVMGIVPLFFLYI 229
N KFN++LVHPTRT H P F YI
Sbjct: 360 NGKIKFNEDLVHPTRTRHGH---PAFLCYI 386
>gb|ABV65756.1| RNA polymerase beta'' subunit, partial (chloroplast) [Melianthus
comosus]
Length = 1267
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ YI LYVT+ +DI++NV + KS ILVQNDQ+VES Q+
Sbjct: 337 FICYIDLYVTIESEDIIHNVTIPPKSFILVQNDQYVESEQV 377
Score = 31.6 bits (70), Expect(2) = 4e-07
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLHVMGIVPLFFLYI 229
+N KFN++LVHPTRT H P F YI
Sbjct: 314 SNGKMKFNEDLVHPTRTRHGH---PAFICYI 341
>ref|YP_009026430.1| RNA polymerase beta'' subunit (chloroplast) [Dendrobium officinale]
gi|507474315|gb|AGM48191.1| RNA polymerase beta''
subunit (chloroplast) [Dendrobium officinale]
Length = 1386
Score = 47.4 bits (111), Expect(3) = 5e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ +I LYVT+ +DIL+NV + KS+ILVQNDQ+VES Q+
Sbjct: 382 FLCFIDLYVTIESRDILHNVNIPTKSLILVQNDQYVESEQV 422
Score = 27.7 bits (60), Expect(3) = 5e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KF+++LVHPTRT H
Sbjct: 359 SNGKIKFDEDLVHPTRTRH 377
Score = 23.1 bits (48), Expect(3) = 5e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH F+ FI Y+
Sbjct: 371 HPTRTRHGHPAFLCFIDLYV 390
>gb|AFJ80058.1| RNA polymerase beta subunit, partial (chloroplast) [Cypripedium
palangshanense]
Length = 884
Score = 47.4 bits (111), Expect(3) = 5e-07
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ +I LYVT+ +DIL+NV + KS+ILVQNDQ+VES Q+
Sbjct: 29 FLCFIDLYVTIESRDILHNVNIPTKSLILVQNDQYVESEQV 69
Score = 27.7 bits (60), Expect(3) = 5e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KF+++LVHPTRT H
Sbjct: 6 SNGKIKFDEDLVHPTRTRH 24
Score = 23.1 bits (48), Expect(3) = 5e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH F+ FI Y+
Sbjct: 18 HPTRTRHGHPAFLCFIDLYV 37
>gb|AFJ73380.1| RNA polymerase beta subunit, partial (chloroplast) [Phragmipedium
lindleyanum]
Length = 880
Score = 46.6 bits (109), Expect(3) = 5e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ +I LYVT+ +DI++NV + KS+ILVQNDQ+VES Q+
Sbjct: 29 FICFIDLYVTIESRDIIHNVNIPTKSLILVQNDQYVESEQV 69
Score = 27.7 bits (60), Expect(3) = 5e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KF+++LVHPTRT H
Sbjct: 6 SNGKIKFDEDLVHPTRTRH 24
Score = 23.9 bits (50), Expect(3) = 5e-07
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH FI FI Y+
Sbjct: 18 HPTRTRHGHPAFICFIDLYV 37
>gb|AFU94778.1| RpoC2, partial (chloroplast) [Bhesa sp. CCD-2012]
Length = 1630
Score = 48.1 bits (113), Expect(2) = 6e-07
Identities = 25/43 (58%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTL--KSMILVQNDQFVES*QM 335
+ YI LYVT+ QDIL+NV +T+ KS +LVQNDQ+VES Q+
Sbjct: 394 FLCYIDLYVTIESQDILHNVTITIPQKSFLLVQNDQYVESEQV 436
Score = 30.8 bits (68), Expect(2) = 6e-07
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLHVMGIVPLFFLYI 229
+N KFN++LVHPTRT H P F YI
Sbjct: 371 SNGKIKFNEDLVHPTRTRHGH---PAFLCYI 398
>gb|ABV65764.1| RNA polymerase beta'' subunit, partial (chloroplast) [Phyllanthus
calycinus]
Length = 1271
Score = 49.7 bits (117), Expect(2) = 6e-07
Identities = 24/41 (58%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ YI LYVT+ QDIL+NV + KS++LVQNDQ+VES Q+
Sbjct: 348 FLCYIDLYVTIQSQDILHNVTIPPKSLLLVQNDQYVESEQV 388
Score = 29.3 bits (64), Expect(2) = 6e-07
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLHVMGIVPLFFLYI 229
+N +FN++LVHPTRT H P F YI
Sbjct: 325 SNGKIQFNEDLVHPTRTRHGH---PAFLCYI 352
>ref|YP_009024783.1| RNA polymerase beta' subunit (chloroplast) [Trigonobalanus
doichangensis] gi|597710354|gb|AHN16115.1| RNA
polymerase beta' subunit (chloroplast) [Trigonobalanus
doichangensis]
Length = 1395
Score = 46.6 bits (109), Expect(2) = 8e-07
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ YIYLYVT+ +D L+ V + KS ILVQNDQ+V+S Q+
Sbjct: 383 FICYIYLYVTIESEDSLHKVTIPPKSFILVQNDQYVQSEQV 423
Score = 32.0 bits (71), Expect(2) = 8e-07
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLHVMGIVPLFFLYILI 235
+N KFN++LVHPTRT H P F YI +
Sbjct: 360 SNGKMKFNEDLVHPTRTRHGH---PAFICYIYL 389
>ref|YP_784376.1| RNA polymerase beta' subunit [Drimys granadensis]
gi|122164451|sp|Q06H07.1|RPOC2_DRIGR RecName:
Full=DNA-directed RNA polymerase subunit beta'';
AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
polymerase subunit beta''; Short=RNA polymerase subunit
beta'' gi|112032652|gb|ABH88287.1| RNA polymerase beta'
subunit [Drimys granadensis]
Length = 1381
Score = 48.1 bits (113), Expect(2) = 8e-07
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ YI LYVT+ QDIL+NV + KS +LVQNDQ+VES Q+
Sbjct: 384 FLCYIDLYVTIESQDILHNVNIPPKSFLLVQNDQYVESEQV 424
Score = 30.4 bits (67), Expect(2) = 8e-07
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +2
Query: 140 NKSKKFNKNLVHPTRTLHVMGIVPLFFLYI 229
N KFN++LVHPTRT H P F YI
Sbjct: 362 NGKIKFNEDLVHPTRTRHGH---PAFLCYI 388
>gb|ABV65726.1| RNA polymerase beta'' subunit, partial (chloroplast) [Crossosoma
californicum]
Length = 1266
Score = 47.8 bits (112), Expect(2) = 8e-07
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ YI LYVT+ +DI+YNV + KS +LVQNDQ+VE+ Q+
Sbjct: 334 FLCYIDLYVTIESEDIIYNVTIPPKSFLLVQNDQYVEAEQV 374
Score = 30.8 bits (68), Expect(2) = 8e-07
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLHVMGIVPLFFLYI 229
+N KFN++LVHPTRT H P F YI
Sbjct: 311 SNGKIKFNEDLVHPTRTRHGH---PAFLCYI 338
>ref|YP_008081876.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium
mannii] gi|482662563|gb|AGK25785.1| DNA-directed RNA
polymerase beta'' chain (chloroplast) [Cymbidium mannii]
Length = 1378
Score = 46.6 bits (109), Expect(3) = 9e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ +I LYVT+ +DI++NV + KS+ILVQNDQ+VES Q+
Sbjct: 378 FLCFIDLYVTIESRDIIHNVNIPTKSLILVQNDQYVESEQV 418
Score = 27.7 bits (60), Expect(3) = 9e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KF+++LVHPTRT H
Sbjct: 355 SNGKIKFDEDLVHPTRTRH 373
Score = 23.1 bits (48), Expect(3) = 9e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH F+ FI Y+
Sbjct: 367 HPTRTRHGHPAFLCFIDLYV 386
>gb|AGK25707.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium
tortisepalum]
Length = 1378
Score = 46.6 bits (109), Expect(3) = 9e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ +I LYVT+ +DI++NV + KS+ILVQNDQ+VES Q+
Sbjct: 378 FLCFIDLYVTIESRDIIHNVNIPTKSLILVQNDQYVESEQV 418
Score = 27.7 bits (60), Expect(3) = 9e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KF+++LVHPTRT H
Sbjct: 355 SNGKIKFDEDLVHPTRTRH 373
Score = 23.1 bits (48), Expect(3) = 9e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH F+ FI Y+
Sbjct: 367 HPTRTRHGHPAFLCFIDLYV 386
>ref|YP_008081720.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium
tortisepalum] gi|482662168|gb|AGK25395.1| DNA-directed
RNA polymerase beta'' chain (chloroplast) [Cymbidium
tortisepalum] gi|482662247|gb|AGK25473.1| DNA-directed
RNA polymerase beta'' chain (chloroplast) [Cymbidium
tortisepalum]
Length = 1378
Score = 46.6 bits (109), Expect(3) = 9e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ +I LYVT+ +DI++NV + KS+ILVQNDQ+VES Q+
Sbjct: 378 FLCFIDLYVTIESRDIIHNVNIPTKSLILVQNDQYVESEQV 418
Score = 27.7 bits (60), Expect(3) = 9e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KF+++LVHPTRT H
Sbjct: 355 SNGKIKFDEDLVHPTRTRH 373
Score = 23.1 bits (48), Expect(3) = 9e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH F+ FI Y+
Sbjct: 367 HPTRTRHGHPAFLCFIDLYV 386
>ref|YP_008081642.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium
sinense] gi|482662089|gb|AGK25317.1| DNA-directed RNA
polymerase beta'' chain (chloroplast) [Cymbidium
sinense]
Length = 1378
Score = 46.6 bits (109), Expect(3) = 9e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ +I LYVT+ +DI++NV + KS+ILVQNDQ+VES Q+
Sbjct: 378 FLCFIDLYVTIESRDIIHNVNIPTKSLILVQNDQYVESEQV 418
Score = 27.7 bits (60), Expect(3) = 9e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KF+++LVHPTRT H
Sbjct: 355 SNGKIKFDEDLVHPTRTRH 373
Score = 23.1 bits (48), Expect(3) = 9e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH F+ FI Y+
Sbjct: 367 HPTRTRHGHPAFLCFIDLYV 386
>gb|AFJ80055.1| RNA polymerase beta subunit, partial (chloroplast) [Cypripedium
passerinum]
Length = 887
Score = 46.6 bits (109), Expect(3) = 9e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ +I LYVT+ +DI++NV + KS+ILVQNDQ+VES Q+
Sbjct: 29 FLCFIDLYVTIESRDIIHNVNIPTKSLILVQNDQYVESEQV 69
Score = 27.7 bits (60), Expect(3) = 9e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KF+++LVHPTRT H
Sbjct: 6 SNGKIKFDEDLVHPTRTRH 24
Score = 23.1 bits (48), Expect(3) = 9e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH F+ FI Y+
Sbjct: 18 HPTRTRHGHPAFLCFIDLYV 37
>gb|AFJ73384.1| RNA polymerase beta subunit, partial (chloroplast) [Cypripedium
flavum]
Length = 887
Score = 46.6 bits (109), Expect(3) = 9e-07
Identities = 22/41 (53%), Positives = 32/41 (78%)
Frame = +3
Query: 213 YFFYIYLYVTLGGQDILYNVIMTLKSMILVQNDQFVES*QM 335
+ +I LYVT+ +DI++NV + KS+ILVQNDQ+VES Q+
Sbjct: 29 FLCFIDLYVTIESRDIIHNVNIPTKSLILVQNDQYVESEQV 69
Score = 27.7 bits (60), Expect(3) = 9e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 137 NNKSKKFNKNLVHPTRTLH 193
+N KF+++LVHPTRT H
Sbjct: 6 SNGKIKFDEDLVHPTRTRH 24
Score = 23.1 bits (48), Expect(3) = 9e-07
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 178 HTYTARHGHRPFIFFIYTYM 237
H RHGH F+ FI Y+
Sbjct: 18 HPTRTRHGHPAFLCFIDLYV 37