BLASTX nr result
ID: Akebia25_contig00038200
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00038200
(372 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABG22123.1| polyprotein [Prunus avium] 103 8e-29
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera] 115 6e-28
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 110 1e-27
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 110 1e-27
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula] 110 1e-27
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 110 1e-27
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus] 109 2e-27
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 109 2e-27
emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera] 113 2e-27
emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera] 113 2e-27
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera] 113 2e-27
emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera] 113 2e-27
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera] 113 2e-27
emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera] 113 2e-27
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas] 111 2e-27
emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera] 113 2e-27
emb|CAN71038.1| hypothetical protein VITISV_011062 [Vitis vinifera] 113 2e-27
emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera] 113 2e-27
gb|AFB73911.1| polyprotein [Citrus sinensis] 107 3e-27
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 103 4e-27
>gb|ABG22123.1| polyprotein [Prunus avium]
Length = 276
Score = 103 bits (258), Expect(2) = 8e-29
Identities = 49/78 (62%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M ++PYAS VGSLMYAMVCTRPDISQAVS+VSR+M NPGK HW+ +KW+LRY+ GT D
Sbjct: 100 MAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKWILRYILGTVDVG 159
Query: 233 LCFGGDTCQ---ISGFVD 277
L F D + G+VD
Sbjct: 160 LLFQQDKVSGQCVVGYVD 177
Score = 48.9 bits (115), Expect(2) = 8e-29
Identities = 23/31 (74%), Positives = 28/31 (90%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMAM 369
+F+I G PVSWRS+L +TVALSTTEAEYMA+
Sbjct: 194 VFTIAGGPVSWRSILQSTVALSTTEAEYMAV 224
>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
Length = 1286
Score = 115 bits (287), Expect(2) = 6e-28
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+V+KW+LRYLKG+ DT
Sbjct: 1065 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEVVKWILRYLKGSLDTC 1124
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 1125 LCFTGASLKLQGYVD 1139
Score = 34.7 bits (78), Expect(2) = 6e-28
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 1156 VFTLGGTAISWASNLQKIVTLSTTEAEYVA 1185
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 110 bits (276), Expect(2) = 1e-27
Identities = 49/75 (65%), Positives = 59/75 (78%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPY+S VGSLMYAMVCTRPDI+ AV VVSRF+ NPGK HW+ +KW+LRYL+GTT
Sbjct: 1106 MAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDC 1165
Query: 233 LCFGGDTCQISGFVD 277
LCFGG + G+ D
Sbjct: 1166 LCFGGSDPILKGYTD 1180
Score = 38.1 bits (87), Expect(2) = 1e-27
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
LF+ G +SW+S L VALSTTEAEY+A
Sbjct: 1197 LFTFSGGAISWQSKLQKCVALSTTEAEYIA 1226
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 110 bits (274), Expect(2) = 1e-27
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M RVPYAS VGSLMYAM+CTRPDI+QAV VVSRFM +PGK HW +K ++RY+KGT+ +
Sbjct: 1083 MSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVA 1142
Query: 233 LCFGGDTCQISGFVD 277
+CFGG + G+VD
Sbjct: 1143 VCFGGSELTVRGYVD 1157
Score = 38.9 bits (89), Expect(2) = 1e-27
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G VSW S L VALSTTEAEYMA
Sbjct: 1174 VFTLTGGAVSWLSKLQTVVALSTTEAEYMA 1203
>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 110 bits (274), Expect(2) = 1e-27
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M RVPYAS VGSLMYAM+CTRPDI+QAV VVSRFM +PGK HW +K ++RY+KGT+ +
Sbjct: 1083 MSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVA 1142
Query: 233 LCFGGDTCQISGFVD 277
+CFGG + G+VD
Sbjct: 1143 VCFGGSELTVRGYVD 1157
Score = 38.9 bits (89), Expect(2) = 1e-27
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G VSW S L VALSTTEAEYMA
Sbjct: 1174 VFTLAGGAVSWLSKLQTVVALSTTEAEYMA 1203
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 110 bits (274), Expect(2) = 1e-27
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M RVPYAS VGSLMYAM+CTRPDI+QAV VVSRFM +PGK HW +K ++RY+KGT+ +
Sbjct: 1083 MSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVA 1142
Query: 233 LCFGGDTCQISGFVD 277
+CFGG + G+VD
Sbjct: 1143 VCFGGSELTVRGYVD 1157
Score = 38.9 bits (89), Expect(2) = 1e-27
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G VSW S L VALSTTEAEYMA
Sbjct: 1174 VFTLAGGAVSWLSKLQTVVALSTTEAEYMA 1203
>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
Length = 1305
Score = 109 bits (272), Expect(2) = 2e-27
Identities = 49/75 (65%), Positives = 59/75 (78%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M RVPYAS VGSLMYAM+CTRPDI+QAV VSRFM +PGK HW +K +LRY++GT+ +
Sbjct: 1083 MSRVPYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRILRYIRGTSGAA 1142
Query: 233 LCFGGDTCQISGFVD 277
LCFGG I G+VD
Sbjct: 1143 LCFGGSEFTIRGYVD 1157
Score = 38.9 bits (89), Expect(2) = 2e-27
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G VSW S L VALSTTEAEYMA
Sbjct: 1174 VFTLAGGAVSWLSKLQTVVALSTTEAEYMA 1203
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 109 bits (272), Expect(2) = 2e-27
Identities = 48/75 (64%), Positives = 60/75 (80%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M RVPYAS VGSLMYAM+CTRPDI+QAV VVSRFM +PGK HW +K ++RY+KGT+ +
Sbjct: 1083 MSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIKGTSGVA 1142
Query: 233 LCFGGDTCQISGFVD 277
+CFGG + G+VD
Sbjct: 1143 VCFGGSELTVWGYVD 1157
Score = 38.9 bits (89), Expect(2) = 2e-27
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G VSW S L VALSTTEAEYMA
Sbjct: 1174 VFTLAGGAVSWLSKLQTVVALSTTEAEYMA 1203
>emb|CAN67882.1| hypothetical protein VITISV_022356 [Vitis vinifera]
Length = 1299
Score = 113 bits (283), Expect(2) = 2e-27
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+ +KW+LRYLKG+ DT
Sbjct: 1078 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 1137
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 1138 LCFTGASLKLQGYVD 1152
Score = 34.7 bits (78), Expect(2) = 2e-27
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 1169 VFTLGGTAISWTSNLQKIVTLSTTEAEYVA 1198
>emb|CAN69431.1| hypothetical protein VITISV_024659 [Vitis vinifera]
Length = 1287
Score = 113 bits (283), Expect(2) = 2e-27
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+ +KW+LRYLKG+ DT
Sbjct: 1066 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 1125
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 1126 LCFTGASLKLQGYVD 1140
Score = 34.7 bits (78), Expect(2) = 2e-27
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 1157 VFTLGGTXISWTSNLQKIVTLSTTEAEYVA 1186
>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
Length = 1279
Score = 113 bits (283), Expect(2) = 2e-27
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+ +KW+LRYLKG+ DT
Sbjct: 1058 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 1117
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 1118 LCFTGASLKLQGYVD 1132
Score = 34.7 bits (78), Expect(2) = 2e-27
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 1149 VFTLGGTAISWASNLQKIVTLSTTEAEYVA 1178
>emb|CAN74341.1| hypothetical protein VITISV_043997 [Vitis vinifera]
Length = 1269
Score = 113 bits (283), Expect(2) = 2e-27
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+ +KW+LRYLKG+ DT
Sbjct: 1048 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 1107
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 1108 LCFTGASLKLQGYVD 1122
Score = 34.7 bits (78), Expect(2) = 2e-27
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 1139 VFTLGGTAISWTSNLQKIVTLSTTEAEYVA 1168
>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
Length = 1222
Score = 113 bits (283), Expect(2) = 2e-27
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+ +KW+LRYLKG+ DT
Sbjct: 1001 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 1060
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 1061 LCFTGASLKLQGYVD 1075
Score = 34.7 bits (78), Expect(2) = 2e-27
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 1092 VFTLGGTAISWTSNLQKIVTLSTTEAEYVA 1121
>emb|CAN69998.1| hypothetical protein VITISV_006839 [Vitis vinifera]
Length = 1211
Score = 113 bits (283), Expect(2) = 2e-27
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+ +KW+LRYLKG+ DT
Sbjct: 990 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 1049
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 1050 LCFTGASLKLQGYVD 1064
Score = 34.7 bits (78), Expect(2) = 2e-27
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 1081 VFTLGGTTISWTSNLQKIVTLSTTEAEYVA 1110
>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
Length = 1298
Score = 111 bits (277), Expect(2) = 2e-27
Identities = 49/75 (65%), Positives = 62/75 (82%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M RVPYAS VGSLM+AM+CTRPDI+QAV VVSR+M NPG+ HW +K +LRY+KGT+D +
Sbjct: 1076 MSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRILRYIKGTSDVA 1135
Query: 233 LCFGGDTCQISGFVD 277
LC+GG I+G+VD
Sbjct: 1136 LCYGGSDFIINGYVD 1150
Score = 36.6 bits (83), Expect(2) = 2e-27
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F + G VSW S L A VA STTEAEY+A
Sbjct: 1167 VFKVAGGAVSWVSKLQAVVATSTTEAEYVA 1196
>emb|CAN65867.1| hypothetical protein VITISV_034935 [Vitis vinifera]
Length = 1137
Score = 113 bits (282), Expect(2) = 2e-27
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+ +KW+LRYLKG+ DT
Sbjct: 916 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 975
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 976 LCFTGASLKLXGYVD 990
Score = 34.7 bits (78), Expect(2) = 2e-27
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 1007 VFTLGGTAISWTSNLQKIVTLSTTEAEYVA 1036
>emb|CAN71038.1| hypothetical protein VITISV_011062 [Vitis vinifera]
Length = 646
Score = 113 bits (283), Expect(2) = 2e-27
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+ +KW+LRYLKG+ DT
Sbjct: 517 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 576
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 577 LCFTGASLKLQGYVD 591
Score = 34.3 bits (77), Expect(2) = 2e-27
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 608 VFTLGGTGISWTSNLQKIVTLSTTEAEYVA 637
>emb|CAN67337.1| hypothetical protein VITISV_004415 [Vitis vinifera]
Length = 281
Score = 113 bits (283), Expect(2) = 2e-27
Identities = 50/75 (66%), Positives = 61/75 (81%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M +VPYAS +GSLMYAMVCTRPDI+ AV VVSRFM PGK HW+ +KW+LRYLKG+ DT
Sbjct: 60 MSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLKGSLDTC 119
Query: 233 LCFGGDTCQISGFVD 277
LCF G + ++ G+VD
Sbjct: 120 LCFTGASLKLQGYVD 134
Score = 34.3 bits (77), Expect(2) = 2e-27
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ G +SW S L V LSTTEAEY+A
Sbjct: 151 VFTLGGTVISWTSNLQKIVTLSTTEAEYVA 180
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 107 bits (267), Expect(2) = 3e-27
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M RVPYAS VGSLM+AM+CTRPDI+QAV VVSR+M NPG HW +K +LRY++GT+D +
Sbjct: 1087 MSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIRGTSDVA 1146
Query: 233 LCFGGDTCQISGFVD 277
LC+GG + G+VD
Sbjct: 1147 LCYGGSEFTVRGYVD 1161
Score = 40.0 bits (92), Expect(2) = 3e-27
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMA 366
+F++ GA VSW S L VALSTTEAEYMA
Sbjct: 1178 VFTLAGAAVSWVSKLQTVVALSTTEAEYMA 1207
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 103 bits (256), Expect(2) = 4e-27
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = +2
Query: 53 M*RVPYASTVGSLMYAMVCTRPDISQAVSVVSRFMVNPGKTHWKVMKWVLRYLKGTTDTS 232
M RVPY+S VGSLMYAMVC+RPD+S A+SVVSR+M NPGK HWK ++W+ RYL+GT+
Sbjct: 1318 MSRVPYSSAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLRGTSSAC 1377
Query: 233 LCFGGDTCQISGFVD 277
L FG + G+VD
Sbjct: 1378 LQFGRSRDGLVGYVD 1392
Score = 43.9 bits (102), Expect(2) = 4e-27
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +1
Query: 277 LFSIHGAPVSWRSML*ATVALSTTEAEYMAM 369
+F+I G VSW++ L ATVALSTTEAEYMA+
Sbjct: 1409 VFTIGGCAVSWKASLQATVALSTTEAEYMAI 1439