BLASTX nr result
ID: Akebia25_contig00038004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00038004
(450 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 61 7e-09
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 60 1e-08
ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664... 57 1e-08
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 57 1e-08
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 54 3e-08
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 59 3e-08
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 59 3e-08
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 59 3e-08
ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669... 56 3e-08
ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 56 4e-08
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 59 6e-08
gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 59 6e-08
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 59 6e-08
ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756... 60 7e-08
ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761... 60 7e-08
gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subc... 59 1e-07
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 57 2e-07
emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera] 50 3e-07
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 57 4e-07
gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 58 4e-07
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 60.8 bits (146), Expect(2) = 7e-09
Identities = 29/62 (46%), Positives = 39/62 (62%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*VKIESWETYCDHMSKN 266
+PN+ + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V + T + KN
Sbjct: 1368 VPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKN 1427
Query: 265 RK 260
K
Sbjct: 1428 NK 1429
Score = 24.6 bits (52), Expect(2) = 7e-09
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TT PF+
Sbjct: 1436 LPHIEFAYNRSLHSTTKMCPFE 1457
>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1720
Score = 60.1 bits (144), Expect(2) = 1e-08
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*VKIESWETYCDHMSKN 266
+PN+ + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V S T + KN
Sbjct: 1383 VPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKN 1442
Score = 24.6 bits (52), Expect(2) = 1e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TT PF+
Sbjct: 1451 LPHIEFAYNRSLHSTTKMCPFE 1472
>ref|XP_006596896.1| PREDICTED: uncharacterized protein LOC102664455 [Glycine max]
Length = 1176
Score = 56.6 bits (135), Expect(2) = 1e-08
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 15/72 (20%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*V--------------- 311
+P S + +R+ +F+SHFWR+L +G+KL FST CHPQ GQT V
Sbjct: 921 LPRSIVSDRDAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNRTLGTLLRTVLKK 980
Query: 310 KIESWETYCDHM 275
++SWE H+
Sbjct: 981 NLKSWEACLPHV 992
Score = 28.1 bits (61), Expect(2) = 1e-08
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TTN SPF+
Sbjct: 989 LPHVEFAYNRAVHSTTNCSPFE 1010
>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
Length = 612
Score = 56.6 bits (135), Expect(2) = 1e-08
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 15/72 (20%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*V--------------- 311
+P S + +R+ +F+SHFWR+L +G+KL FST CHPQ GQT V
Sbjct: 380 LPRSIVSDRDAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNKTLGTLLRTVLKK 439
Query: 310 KIESWETYCDHM 275
++SWE H+
Sbjct: 440 NLKSWEACLPHV 451
Score = 28.1 bits (61), Expect(2) = 1e-08
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TTN SPF+
Sbjct: 448 LPHVEFAYNRTVHSTTNCSPFE 469
>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
Length = 1358
Score = 53.9 bits (128), Expect(2) = 3e-08
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
IP + + +R+ +F+SHFWR L LG+KL +ST CHPQ GQT
Sbjct: 1047 IPRTIVSDRDAKFLSHFWRILWGKLGTKLLYSTACHPQTDGQT 1089
Score = 29.6 bits (65), Expect(2) = 3e-08
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = -1
Query: 249 SLPSLEFEFNKMPNRTTNFSPFK 181
SLP +EF +N+ + TTN SPF+
Sbjct: 1114 SLPYVEFAYNRAIHSTTNMSPFE 1136
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 58.5 bits (140), Expect(2) = 3e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQT
Sbjct: 1324 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQT 1366
Score = 24.6 bits (52), Expect(2) = 3e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TT PF+
Sbjct: 1392 LPHIEFAYNRSLHSTTKMCPFQ 1413
>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
Length = 1717
Score = 58.5 bits (140), Expect(2) = 3e-08
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*VKIESWET 290
+PN+ + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V S T
Sbjct: 1380 VPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLST 1431
Score = 24.6 bits (52), Expect(2) = 3e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TT PF+
Sbjct: 1448 LPHIEFAYNRSLHSTTKMCPFE 1469
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 58.5 bits (140), Expect(2) = 3e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQT
Sbjct: 1327 VPNTIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQT 1369
Score = 24.6 bits (52), Expect(2) = 3e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TT PF+
Sbjct: 1395 LPHIEFAYNRSLHSTTKMCPFQ 1416
>ref|XP_006575965.1| PREDICTED: uncharacterized protein LOC102669237, partial [Glycine
max]
Length = 1520
Score = 56.2 bits (134), Expect(2) = 3e-08
Identities = 27/65 (41%), Positives = 39/65 (60%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*VKIESWETYCDHMSKN 266
+P + + +R+ +F+SHFW++L LG+KL FST CHPQ GQT V S T + K
Sbjct: 1371 LPRTIVSDRDAKFLSHFWKTLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTLLRALLKG 1430
Query: 265 RKLSY 251
S+
Sbjct: 1431 NHKSW 1435
Score = 26.9 bits (58), Expect(2) = 3e-08
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ +RTT SPF+
Sbjct: 1439 LPHVEFAYNRGVHRTTKQSPFE 1460
>ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis]
Length = 821
Score = 55.8 bits (133), Expect(2) = 4e-08
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
+P S + +R+ +F+SHFW++L LG+KL FST CHPQ GQT
Sbjct: 250 VPRSIVSDRDAKFLSHFWKTLWGKLGTKLLFSTTCHPQTDGQT 292
Score = 26.9 bits (58), Expect(2) = 4e-08
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + T FSPF+
Sbjct: 318 LPHVEFAYNRTVHSATKFSPFE 339
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 58.5 bits (140), Expect(2) = 6e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQT
Sbjct: 1352 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQT 1394
Score = 23.9 bits (50), Expect(2) = 6e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TT PF+
Sbjct: 1420 LPHVEFAYNRSQHSTTKKCPFE 1441
>gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 58.5 bits (140), Expect(2) = 6e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQT
Sbjct: 1248 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQT 1290
Score = 23.9 bits (50), Expect(2) = 6e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TT PF+
Sbjct: 1316 LPHVEFAYNRSQHSTTKKCPFE 1337
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 58.5 bits (140), Expect(2) = 6e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQT
Sbjct: 1352 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQT 1394
Score = 23.9 bits (50), Expect(2) = 6e-08
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TT PF+
Sbjct: 1420 LPHVEFAYNRSQHSTTKKCPFE 1441
>ref|XP_004980445.1| PREDICTED: uncharacterized protein LOC101756049, partial [Setaria
italica]
Length = 763
Score = 59.7 bits (143), Expect(2) = 7e-08
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
IPN+ + +R+ +F+SHFWRSL +G+KL FST CHPQ GQT
Sbjct: 612 IPNTIVSDRDAKFLSHFWRSLWNKMGTKLLFSTTCHPQTDGQT 654
Score = 22.3 bits (46), Expect(2) = 7e-08
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N + +T PF+
Sbjct: 680 LPHVEFAYNHATHSSTKMRPFQ 701
>ref|XP_004980451.1| PREDICTED: uncharacterized protein LOC101761720, partial [Setaria
italica]
Length = 738
Score = 59.7 bits (143), Expect(2) = 7e-08
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
IPN+ + +R+ +F+SHFWRSL +G+KL FST CHPQ GQT
Sbjct: 587 IPNTIVSDRDAKFLSHFWRSLWNKMGTKLLFSTTCHPQTDGQT 629
Score = 22.3 bits (46), Expect(2) = 7e-08
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N + +T PF+
Sbjct: 655 LPHVEFAYNHATHSSTKMCPFQ 676
>gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 889
Score = 58.5 bits (140), Expect(2) = 1e-07
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQT
Sbjct: 665 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQT 707
Score = 22.7 bits (47), Expect(2) = 1e-07
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N + TT PF+
Sbjct: 733 LPHVEFAYNHSQHSTTKKCPFE 754
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 57.0 bits (136), Expect(2) = 2e-07
Identities = 23/43 (53%), Positives = 32/43 (74%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
+PN+ + +R+ +F+SHFWR+L LG+K FST CHPQ GQT
Sbjct: 1352 VPNTIVSDRDTKFLSHFWRTLWAKLGTKFLFSTTCHPQTDGQT 1394
Score = 23.9 bits (50), Expect(2) = 2e-07
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + TT PF+
Sbjct: 1420 LPHVEFAYNRSQHSTTKKCPFE 1441
>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
Length = 1323
Score = 49.7 bits (117), Expect(2) = 3e-07
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT 317
+P S + NR+ +FMS+FW++L LG++L FS+ HPQ GQT
Sbjct: 998 LPQSIVSNRDVKFMSYFWKTLWVKLGTQLKFSSSFHPQTDGQT 1040
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP EF FN NRTT + PF+
Sbjct: 1066 LPQAEFAFNSSTNRTTGYLPFE 1087
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 56.6 bits (135), Expect(2) = 4e-07
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQ 320
+PN+ + +R+ +F+SHFWR+L LG+KL FST CHPQ GQ
Sbjct: 1303 VPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQ 1344
Score = 22.7 bits (47), Expect(2) = 4e-07
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF N+ + TT PF+
Sbjct: 1371 LPHIEFACNRSLHSTTKMCPFQ 1392
>gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1588
Score = 57.8 bits (138), Expect(2) = 4e-07
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 15/68 (22%)
Frame = -3
Query: 445 IPNSRIHNREKRFMSHFWRSLHRCLGSKLNFSTHCHPQNKGQT*V--------------- 311
IP + + +R+ +F+SHFWR L LG+KL FST CHPQ GQT V
Sbjct: 1277 IPRTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKG 1336
Query: 310 KIESWETY 287
K+ SWE Y
Sbjct: 1337 KLTSWEDY 1344
Score = 21.6 bits (44), Expect(2) = 4e-07
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -1
Query: 246 LPSLEFEFNKMPNRTTNFSPFK 181
LP +EF +N+ + +T +PF+
Sbjct: 1345 LPIVEFAYNRTFHSSTGKTPFE 1366