BLASTX nr result
ID: Akebia25_contig00037776
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00037776
(440 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prun... 97 2e-18
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 94 2e-17
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 89 5e-16
ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citr... 89 5e-16
ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citr... 89 5e-16
ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citr... 89 5e-16
ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citr... 89 5e-16
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 89 6e-16
ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 89 6e-16
gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] 86 5e-15
ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarp... 86 7e-15
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 85 1e-14
sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,... 84 2e-14
gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus... 82 6e-14
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri... 82 6e-14
ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chlo... 82 1e-13
tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea m... 82 1e-13
ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [S... 82 1e-13
ref|NP_001151728.1| ribonucleoprotein A [Zea mays] gi|195649373|... 82 1e-13
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 81 2e-13
>ref|XP_007205644.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
gi|462401286|gb|EMJ06843.1| hypothetical protein
PRUPE_ppa009295mg [Prunus persica]
Length = 298
Score = 97.1 bits (240), Expect = 2e-18
Identities = 51/86 (59%), Positives = 58/86 (67%)
Frame = -2
Query: 259 AFLSTRRYDGLSSRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAEL 80
+FL++ R+ SSRFVRNV +PDLKLFVGNLPFSVDSA+L
Sbjct: 72 SFLNSGRFQSASSRFVRNVAVSSEFEQDEEVLSDDGEASFAPDLKLFVGNLPFSVDSAQL 131
Query: 79 AGLFERVGNVEMVEVIYDRLTGRSRG 2
AGLFE GNVEMVEVIYD+ TGRSRG
Sbjct: 132 AGLFESAGNVEMVEVIYDKTTGRSRG 157
>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 94.0 bits (232), Expect = 2e-17
Identities = 59/118 (50%), Positives = 66/118 (55%)
Frame = -2
Query: 355 PKTLIFSRTTDXXXXXXXXLKPPNKPXXXXXSAFLSTRRYDGLSSRFVRNVTFXXXXXXX 176
PKTL S+ T K S S+R + LSSRFVRNV
Sbjct: 15 PKTLAISKPTSVSFFSLPFSCSSLKLHSNSISLSPSSRGFLTLSSRFVRNVAVSSDYEQD 74
Query: 175 XXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNVEMVEVIYDRLTGRSRG 2
SPDLKLFVGNLPF+VDSA LAGLFE+ GNVEMVEVIYD++TGRSRG
Sbjct: 75 EDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRG 132
>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|568855826|ref|XP_006481497.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like [Citrus
sinensis] gi|557530828|gb|ESR42011.1| hypothetical
protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/74 (64%), Positives = 51/74 (68%)
Frame = -2
Query: 223 SRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNVEM 44
SRFVRNV SPDLKLFVGNLPFSVDSA+LAGLFE GNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 43 VEVIYDRLTGRSRG 2
VEVIYD++TGRSRG
Sbjct: 123 VEVIYDKVTGRSRG 136
>ref|XP_006428770.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530827|gb|ESR42010.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 266
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/74 (64%), Positives = 51/74 (68%)
Frame = -2
Query: 223 SRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNVEM 44
SRFVRNV SPDLKLFVGNLPFSVDSA+LAGLFE GNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 43 VEVIYDRLTGRSRG 2
VEVIYD++TGRSRG
Sbjct: 123 VEVIYDKVTGRSRG 136
>ref|XP_006428769.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530826|gb|ESR42009.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 263
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/74 (64%), Positives = 51/74 (68%)
Frame = -2
Query: 223 SRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNVEM 44
SRFVRNV SPDLKLFVGNLPFSVDSA+LAGLFE GNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 43 VEVIYDRLTGRSRG 2
VEVIYD++TGRSRG
Sbjct: 123 VEVIYDKVTGRSRG 136
>ref|XP_006428768.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530825|gb|ESR42008.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 271
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/74 (64%), Positives = 51/74 (68%)
Frame = -2
Query: 223 SRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNVEM 44
SRFVRNV SPDLKLFVGNLPFSVDSA+LAGLFE GNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 43 VEVIYDRLTGRSRG 2
VEVIYD++TGRSRG
Sbjct: 123 VEVIYDKVTGRSRG 136
>ref|XP_006428767.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|557530824|gb|ESR42007.1| hypothetical protein
CICLE_v10012331mg [Citrus clementina]
Length = 297
Score = 89.4 bits (220), Expect = 5e-16
Identities = 48/74 (64%), Positives = 51/74 (68%)
Frame = -2
Query: 223 SRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNVEM 44
SRFVRNV SPDLKLFVGNLPFSVDSA+LAGLFE GNVEM
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGSNFSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEM 122
Query: 43 VEVIYDRLTGRSRG 2
VEVIYD++TGRSRG
Sbjct: 123 VEVIYDKVTGRSRG 136
>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X2 [Solanum tuberosum]
Length = 291
Score = 89.0 bits (219), Expect = 6e-16
Identities = 49/74 (66%), Positives = 50/74 (67%)
Frame = -2
Query: 223 SRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNVEM 44
SRFVRNV SPDLKLFVGNLPFSVDSA LA LFER GNVEM
Sbjct: 63 SRFVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNVEM 122
Query: 43 VEVIYDRLTGRSRG 2
VEVIYD+LTGRSRG
Sbjct: 123 VEVIYDKLTGRSRG 136
>ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
X1 [Solanum tuberosum]
Length = 301
Score = 89.0 bits (219), Expect = 6e-16
Identities = 49/74 (66%), Positives = 50/74 (67%)
Frame = -2
Query: 223 SRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNVEM 44
SRFVRNV SPDLKLFVGNLPFSVDSA LA LFER GNVEM
Sbjct: 63 SRFVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALAELFERAGNVEM 122
Query: 43 VEVIYDRLTGRSRG 2
VEVIYD+LTGRSRG
Sbjct: 123 VEVIYDKLTGRSRG 136
>gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]
Length = 296
Score = 85.9 bits (211), Expect = 5e-15
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 136 PDLKLFVGNLPFSVDSAELAGLFERVGNVEMVEVIYDRLTGRSRG 2
PDLKLFVGNLPFSVDSA+LAGLFER GNVEMVEVIYD+ TGRSRG
Sbjct: 100 PDLKLFVGNLPFSVDSAQLAGLFERTGNVEMVEVIYDKTTGRSRG 144
>ref|XP_002323470.1| 29 kDa ribonucleoprotein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| 29 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 273
Score = 85.5 bits (210), Expect = 7e-15
Identities = 46/76 (60%), Positives = 51/76 (67%)
Frame = -2
Query: 229 LSSRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNV 50
LSSRF++NV S DLKLFVGNLPF+VDSA LAGLFE GNV
Sbjct: 57 LSSRFLKNVAISSEFGQEEDFLSDGDEQSFSQDLKLFVGNLPFNVDSARLAGLFETAGNV 116
Query: 49 EMVEVIYDRLTGRSRG 2
EMVEVIYD++TGRSRG
Sbjct: 117 EMVEVIYDKVTGRSRG 132
>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 84.7 bits (208), Expect = 1e-14
Identities = 49/78 (62%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Frame = -2
Query: 226 SSRFVRNVT---FXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVG 56
SSRFVR VT F SPDLK+FVGNLPFS DSA LA LFER G
Sbjct: 52 SSRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAG 111
Query: 55 NVEMVEVIYDRLTGRSRG 2
NVEMVEVIYD+LTGRSRG
Sbjct: 112 NVEMVEVIYDKLTGRSRG 129
>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = -2
Query: 133 DLKLFVGNLPFSVDSAELAGLFERVGNVEMVEVIYDRLTGRSRG 2
DLKLFVGNLPFSVDSA LAGLFER GNVEMVEVIYD+LTGRSRG
Sbjct: 86 DLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRG 129
>gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Mimulus guttatus]
Length = 309
Score = 82.4 bits (202), Expect = 6e-14
Identities = 39/45 (86%), Positives = 43/45 (95%)
Frame = -2
Query: 136 PDLKLFVGNLPFSVDSAELAGLFERVGNVEMVEVIYDRLTGRSRG 2
PDLKLFVGNLPF+VDSA LAGLFE+ GNVEMVEVIYD+L+GRSRG
Sbjct: 127 PDLKLFVGNLPFNVDSAALAGLFEQAGNVEMVEVIYDKLSGRSRG 171
>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 280
Score = 82.4 bits (202), Expect = 6e-14
Identities = 45/75 (60%), Positives = 50/75 (66%)
Frame = -2
Query: 226 SSRFVRNVTFXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVGNVE 47
SSRFV +V S DLKLFVGNLPF+VDSA+LAGLFE GNVE
Sbjct: 60 SSRFVPSVAISSEFGQEEDVSSDGDESSFSQDLKLFVGNLPFNVDSAQLAGLFESAGNVE 119
Query: 46 MVEVIYDRLTGRSRG 2
MVEVIYD++TGRSRG
Sbjct: 120 MVEVIYDKVTGRSRG 134
>ref|XP_004958419.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Setaria
italica]
Length = 265
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/44 (86%), Positives = 43/44 (97%)
Frame = -2
Query: 133 DLKLFVGNLPFSVDSAELAGLFERVGNVEMVEVIYDRLTGRSRG 2
DLKLFVGNLPFSVDSA+LAGLFE+ G+VEMVEV+YDR+TGRSRG
Sbjct: 77 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRG 120
>tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
Length = 267
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/44 (86%), Positives = 43/44 (97%)
Frame = -2
Query: 133 DLKLFVGNLPFSVDSAELAGLFERVGNVEMVEVIYDRLTGRSRG 2
DLKLFVGNLPFSVDSA+LAGLFE+ G+VEMVEV+YDR+TGRSRG
Sbjct: 76 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRG 119
>ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
gi|241924453|gb|EER97597.1| hypothetical protein
SORBIDRAFT_02g040260 [Sorghum bicolor]
Length = 268
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/44 (86%), Positives = 43/44 (97%)
Frame = -2
Query: 133 DLKLFVGNLPFSVDSAELAGLFERVGNVEMVEVIYDRLTGRSRG 2
DLKLFVGNLPFSVDSA+LAGLFE+ G+VEMVEV+YDR+TGRSRG
Sbjct: 77 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRG 120
>ref|NP_001151728.1| ribonucleoprotein A [Zea mays] gi|195649373|gb|ACG44154.1|
ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A
[Zea mays]
Length = 268
Score = 81.6 bits (200), Expect = 1e-13
Identities = 38/44 (86%), Positives = 43/44 (97%)
Frame = -2
Query: 133 DLKLFVGNLPFSVDSAELAGLFERVGNVEMVEVIYDRLTGRSRG 2
DLKLFVGNLPFSVDSA+LAGLFE+ G+VEMVEV+YDR+TGRSRG
Sbjct: 78 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRG 121
>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 80.9 bits (198), Expect = 2e-13
Identities = 48/78 (61%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Frame = -2
Query: 226 SSRFVRNVT---FXXXXXXXXXXXXXXXXXXXSPDLKLFVGNLPFSVDSAELAGLFERVG 56
SSRFVR VT F SPDLK+FVGNL FS DSA LA LFER G
Sbjct: 52 SSRFVRKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAG 111
Query: 55 NVEMVEVIYDRLTGRSRG 2
NVEMVEVIYD+LTGRSRG
Sbjct: 112 NVEMVEVIYDKLTGRSRG 129