BLASTX nr result
ID: Akebia25_contig00037290
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00037290
(586 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI33876.3| unnamed protein product [Vitis vinifera] 129 4e-28
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 129 4e-28
ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ri... 115 9e-24
gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis] 111 1e-22
ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citr... 111 2e-22
ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 110 3e-22
ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 110 3e-22
ref|XP_006368391.1| 33 kDa ribonucleoprotein [Populus trichocarp... 105 7e-21
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides] 105 7e-21
ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 105 9e-21
ref|XP_007039474.1| RNA-binding family protein isoform 1 [Theobr... 105 1e-20
ref|XP_007209418.1| hypothetical protein PRUPE_ppa009362mg [Prun... 103 3e-20
ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 103 3e-20
ref|XP_006838538.1| hypothetical protein AMTR_s00002p00197820 [A... 100 2e-19
ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycin... 99 6e-19
ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 99 8e-19
ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 98 1e-18
ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arab... 97 2e-18
gb|EYU34147.1| hypothetical protein MIMGU_mgv1a010436mg [Mimulus... 97 4e-18
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 96 7e-18
>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 129 bits (325), Expect = 4e-28
Identities = 63/87 (72%), Positives = 72/87 (82%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
+HLREFFSS+FNPVS RVVFDSPSGRS GYGF SFATKEEAEAA+SA+DGKEL+GRPV L
Sbjct: 172 THLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHL 231
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEEA 324
KFS+K +D D ++GQPEEA
Sbjct: 232 KFSVKTIDESGDEKEEGDISEGQPEEA 258
>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 129 bits (325), Expect = 4e-28
Identities = 63/87 (72%), Positives = 72/87 (82%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
+HLREFFSS+FNPVS RVVFDSPSGRS GYGF SFATKEEAEAA+SA+DGKEL+GRPV L
Sbjct: 202 THLREFFSSNFNPVSVRVVFDSPSGRSGGYGFASFATKEEAEAAISALDGKELMGRPVHL 261
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEEA 324
KFS+K +D D ++GQPEEA
Sbjct: 262 KFSVKTIDESGDEKEEGDISEGQPEEA 288
>ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 278
Score = 115 bits (288), Expect = 9e-24
Identities = 55/86 (63%), Positives = 72/86 (83%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
+HLREFFS++F+PVS+RVVFDSP+GRS+GYGF+SFAT+EEAEAA+SA+DGKEL+GRP+RL
Sbjct: 193 THLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVSFATREEAEAAISALDGKELMGRPLRL 252
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEE 327
KFS + D E+N + Q E+
Sbjct: 253 KFSDRKTDESESENQEEENVEDQSEQ 278
>gb|EXB32996.1| 31 kDa ribonucleoprotein [Morus notabilis]
Length = 295
Score = 111 bits (278), Expect = 1e-22
Identities = 57/96 (59%), Positives = 71/96 (73%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
+HLR+F S +F PVSARVVFD P GRSAGYGF+SFAT+EEAEAA+S++DGKEL+GRP+RL
Sbjct: 204 THLRDFVSENFKPVSARVVFDGPKGRSAGYGFVSFATREEAEAAISSLDGKELMGRPLRL 263
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEEASNAVEKTEE 297
KFS KN D + Q EE + + +TEE
Sbjct: 264 KFSEKNA-----GEKNVDETENQKEEETVSEGQTEE 294
>ref|XP_006428430.1| hypothetical protein CICLE_v10012439mg [Citrus clementina]
gi|567871683|ref|XP_006428431.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|567871685|ref|XP_006428432.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
gi|568877400|ref|XP_006491727.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568877402|ref|XP_006491728.1|
PREDICTED: ribonucleoprotein At2g37220,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877404|ref|XP_006491729.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like isoform
X3 [Citrus sinensis] gi|557530487|gb|ESR41670.1|
hypothetical protein CICLE_v10012439mg [Citrus
clementina] gi|557530488|gb|ESR41671.1| hypothetical
protein CICLE_v10012439mg [Citrus clementina]
gi|557530489|gb|ESR41672.1| hypothetical protein
CICLE_v10012439mg [Citrus clementina]
Length = 275
Score = 111 bits (277), Expect = 2e-22
Identities = 55/87 (63%), Positives = 70/87 (80%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
+HLREFFS++FNPVS++VVF+S GRSAGYGF+SFATKEEAEAA+S++DGKEL+GRP+RL
Sbjct: 189 THLREFFSANFNPVSSKVVFESNEGRSAGYGFVSFATKEEAEAAISSLDGKELMGRPLRL 248
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEEA 324
KF KN D ED ++ Q E+
Sbjct: 249 KFGQKNDDVSESNKEEEDVSEDQSAES 275
>ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 110 bits (275), Expect = 3e-22
Identities = 54/87 (62%), Positives = 73/87 (83%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
++LR+FFS +FNP++ARVVFDSP+GRSAGYGF+SFAT+EEA+ ALS+++GKEL+GRP+RL
Sbjct: 204 NNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRL 263
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEEA 324
KFS +NV+ ED + QPEE+
Sbjct: 264 KFSERNVN--EAETPKEDIVESQPEES 288
>ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 110 bits (275), Expect = 3e-22
Identities = 54/87 (62%), Positives = 73/87 (83%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
++LR+FFS +FNP++ARVVFDSP+GRSAGYGF+SFAT+EEA+ ALS+++GKEL+GRP+RL
Sbjct: 198 NNLRDFFSENFNPIAARVVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRL 257
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEEA 324
KFS +NV+ ED + QPEE+
Sbjct: 258 KFSERNVN--EAETPKEDIVESQPEES 282
>ref|XP_006368391.1| 33 kDa ribonucleoprotein [Populus trichocarpa]
gi|550346304|gb|ERP64960.1| 33 kDa ribonucleoprotein
[Populus trichocarpa]
Length = 294
Score = 105 bits (263), Expect = 7e-21
Identities = 53/86 (61%), Positives = 66/86 (76%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
SHLREFFS++ NPVS+RVVFD P+GRS+GYGF+SFAT+EEA AA+SA GKEL+GRP+RL
Sbjct: 208 SHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRL 267
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEE 327
KFS D E+ ++ Q EE
Sbjct: 268 KFSEDKADESGTEKKEEETSEVQLEE 293
>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 105 bits (263), Expect = 7e-21
Identities = 53/86 (61%), Positives = 66/86 (76%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
SHLREFFS++ NPVS+RVVFD P+GRS+GYGF+SFAT+EEA AA+SA GKEL+GRP+RL
Sbjct: 208 SHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRL 267
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEE 327
KFS D E+ ++ Q EE
Sbjct: 268 KFSEDKADESGTEKKEEETSEVQLEE 293
>ref|XP_006352864.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Solanum
tuberosum]
Length = 284
Score = 105 bits (262), Expect = 9e-21
Identities = 47/68 (69%), Positives = 63/68 (92%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
+ LREFFS+++NP+SARV+FD+ SGR+AGYGF+SF TKE+AEAA+SA+DGKEL+GRP+RL
Sbjct: 200 TQLREFFSANYNPISARVIFDNASGRAAGYGFVSFDTKEQAEAAVSALDGKELMGRPIRL 259
Query: 404 KFSLKNVD 381
KFS ++ D
Sbjct: 260 KFSERDAD 267
>ref|XP_007039474.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508776719|gb|EOY23975.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 281
Score = 105 bits (261), Expect = 1e-20
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
SHLREFFS+ FNPV+ARV+F +PSG+SAGYGF+SFATKEEA+AA+S ++GKEL+ RP+RL
Sbjct: 198 SHLREFFSA-FNPVAARVIFGTPSGQSAGYGFVSFATKEEADAAISTLNGKELMDRPLRL 256
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPE 330
KFS +NVD E +GQ +
Sbjct: 257 KFSERNVDESGGEKKEEKEREGQTD 281
>ref|XP_007209418.1| hypothetical protein PRUPE_ppa009362mg [Prunus persica]
gi|462405153|gb|EMJ10617.1| hypothetical protein
PRUPE_ppa009362mg [Prunus persica]
Length = 295
Score = 103 bits (258), Expect = 3e-20
Identities = 54/87 (62%), Positives = 66/87 (75%), Gaps = 1/87 (1%)
Frame = -3
Query: 584 SHLREFFSSSFN-PVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVR 408
SHLR+F S +F PVSARVVF PSG+S GYGFLSFATKEEAE+A+S+++GKEL+GRP+
Sbjct: 208 SHLRDFVSENFKVPVSARVVFSGPSGKSGGYGFLSFATKEEAESAISSLNGKELMGRPLN 267
Query: 407 LKFSLKNVDXXXXXXXXEDNAKGQPEE 327
LKFS KN E+ +GQPEE
Sbjct: 268 LKFSEKNDRNSGSQKDEEEKFEGQPEE 294
>ref|XP_004245902.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Solanum
lycopersicum]
Length = 285
Score = 103 bits (257), Expect = 3e-20
Identities = 48/68 (70%), Positives = 62/68 (91%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
+ LREFFS++ NP+SARVVFD+ SGR+AGYGF++F TKE+AEAALSA+DGKEL+GRP+RL
Sbjct: 201 TQLREFFSANNNPISARVVFDNASGRAAGYGFVTFDTKEQAEAALSALDGKELMGRPIRL 260
Query: 404 KFSLKNVD 381
KFS ++ D
Sbjct: 261 KFSERDAD 268
>ref|XP_006838538.1| hypothetical protein AMTR_s00002p00197820 [Amborella trichopoda]
gi|548841044|gb|ERN01107.1| hypothetical protein
AMTR_s00002p00197820 [Amborella trichopoda]
Length = 280
Score = 100 bits (250), Expect = 2e-19
Identities = 50/87 (57%), Positives = 66/87 (75%)
Frame = -3
Query: 584 SHLREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRL 405
SHLREFF ++ +PVSARVVFDSPSG+SAGYGF+ +ATKEEAEAA++ +GKEL+GRP+RL
Sbjct: 194 SHLREFFMATTSPVSARVVFDSPSGKSAGYGFIGYATKEEAEAAIAEFNGKELMGRPLRL 253
Query: 404 KFSLKNVDXXXXXXXXEDNAKGQPEEA 324
+ S + D E + + Q EE+
Sbjct: 254 QLSQRPPDEPDGESKVESDPEDQSEES 280
>ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 99.4 bits (246), Expect = 6e-19
Identities = 52/97 (53%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Frame = -3
Query: 584 SHLREFFSSSFN-PVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVR 408
+HLR+ F+ +F P SARVVFDSPSGRSAGYGF+SF TKE+AEAA+S +DGKEL+GRP+R
Sbjct: 191 THLRQLFAENFKTPSSARVVFDSPSGRSAGYGFVSFLTKEDAEAAISTVDGKELMGRPLR 250
Query: 407 LKFSLKNVDXXXXXXXXEDNAKGQPEEASNAVEKTEE 297
LKFS K +D G E+ + E
Sbjct: 251 LKFSEKKDKAGREKDEDQDKDAGSEEDEDEGSDARPE 287
>ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 99.0 bits (245), Expect = 8e-19
Identities = 48/67 (71%), Positives = 59/67 (88%), Gaps = 1/67 (1%)
Frame = -3
Query: 584 SHLREFFSSSFN-PVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVR 408
+HLR+ F+ +F P SARVVFDSPSGRSAGYGF+SF T+E+AEAA+S +DGKEL+GRP+R
Sbjct: 184 THLRQVFTENFKTPSSARVVFDSPSGRSAGYGFVSFLTREDAEAAISTVDGKELMGRPLR 243
Query: 407 LKFSLKN 387
LKFS KN
Sbjct: 244 LKFSEKN 250
>ref|XP_004301780.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 299
Score = 98.2 bits (243), Expect = 1e-18
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
Frame = -3
Query: 584 SHLREFFSSSFN-PVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVR 408
SHLR+F S +F PVSARVVFD PSG+S GYGF+SFA EEAE A+SA++G+EL+GRPV
Sbjct: 202 SHLRDFVSLNFKTPVSARVVFDGPSGKSVGYGFVSFARMEEAEEAISALNGQELMGRPVT 261
Query: 407 LKFSLKNVDXXXXXXXXEDNAKGQPEEASNAVEKTEE 297
LKFS KN+ ++ + ++ SN EK EE
Sbjct: 262 LKFSEKNI---------GESTNQEEKDNSNQEEKVEE 289
>ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata] gi|297325388|gb|EFH55808.1| hypothetical protein
ARALYDRAFT_482506 [Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 97.4 bits (241), Expect = 2e-18
Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Frame = -3
Query: 584 SHLREFFSSS-FNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVR 408
+HLRE F++S FNPVSARVVF P GRS+GYGF+SFAT+EEAE A++ +DGKE++GRP+
Sbjct: 208 THLRELFTASDFNPVSARVVFADPEGRSSGYGFVSFATREEAEDAIAKLDGKEIMGRPII 267
Query: 407 LKFSLKNVDXXXXXXXXEDNAKGQPEEASNAVEKTEE 297
LKFSL++ DN + + +EE
Sbjct: 268 LKFSLRSASESEDGDTVGDNNTSEDGDTVEDKNTSEE 304
>gb|EYU34147.1| hypothetical protein MIMGU_mgv1a010436mg [Mimulus guttatus]
Length = 312
Score = 96.7 bits (239), Expect = 4e-18
Identities = 48/66 (72%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Frame = -3
Query: 578 LREFFSSSFNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVRLK- 402
LREFFSS F P+S +VVFDSPSG+SAGYGF+SFATKEEA++A+S ++G ELLGRPVRLK
Sbjct: 203 LREFFSSKFKPLSVKVVFDSPSGKSAGYGFVSFATKEEADSAISQLNGTELLGRPVRLKA 262
Query: 401 FSLKNV 384
S KN+
Sbjct: 263 ASEKNI 268
>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
RNA binding protein precursor [Arabidopsis thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA
binding protein precursor [Arabidopsis thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA
binding protein precursor [Arabidopsis thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Arabidopsis thaliana]
Length = 308
Score = 95.9 bits (237), Expect = 7e-18
Identities = 49/93 (52%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Frame = -3
Query: 584 SHLREFFSSS-FNPVSARVVFDSPSGRSAGYGFLSFATKEEAEAALSAMDGKELLGRPVR 408
+HLRE F+++ FNPVSARVVF P GRS+GYGF+SFAT+EEAE A++ ++GKE++GRP+
Sbjct: 208 THLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEAENAITKLNGKEIMGRPIT 267
Query: 407 LKFSLKNVDXXXXXXXXEDNAKGQPEEASNAVE 309
LKFSL++ ++ G EA+NA E
Sbjct: 268 LKFSLRSAS---------ESEDGDSVEANNASE 291