BLASTX nr result

ID: Akebia25_contig00037042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00037042
         (248 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation...    60   4e-07
ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation...    60   4e-07
emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]    60   4e-07
ref|XP_004291516.1| PREDICTED: eukaryotic translation initiation...    59   5e-07
ref|XP_004291515.1| PREDICTED: eukaryotic translation initiation...    59   5e-07
ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation...    59   7e-07

>ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
           isoform 2 [Vitis vinifera]
          Length = 286

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/46 (60%), Positives = 29/46 (63%)
 Frame = +2

Query: 110 PQTNKVRWXXXXXXXXXXXXXXXPPPIVIGPDENGIKKVIEYKFND 247
           PQ NKVRW               PPP VIGPD+NGIKKVIEYKFND
Sbjct: 7   PQPNKVRWGELEEDDTEDLDFLLPPPQVIGPDDNGIKKVIEYKFND 52


>ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
           isoform 1 [Vitis vinifera]
          Length = 293

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/46 (60%), Positives = 29/46 (63%)
 Frame = +2

Query: 110 PQTNKVRWXXXXXXXXXXXXXXXPPPIVIGPDENGIKKVIEYKFND 247
           PQ NKVRW               PPP VIGPD+NGIKKVIEYKFND
Sbjct: 7   PQPNKVRWGELEEDDTEDLDFLLPPPQVIGPDDNGIKKVIEYKFND 52


>emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]
          Length = 306

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/46 (60%), Positives = 29/46 (63%)
 Frame = +2

Query: 110 PQTNKVRWXXXXXXXXXXXXXXXPPPIVIGPDENGIKKVIEYKFND 247
           PQ NKVRW               PPP VIGPD+NGIKKVIEYKFND
Sbjct: 7   PQPNKVRWGELEEDDTEDLDFLLPPPQVIGPDDNGIKKVIEYKFND 52


>ref|XP_004291516.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           G-like isoform 2 [Fragaria vesca subsp. vesca]
          Length = 295

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/58 (55%), Positives = 34/58 (58%)
 Frame = +2

Query: 74  SLQRPGSANQNPPQTNKVRWXXXXXXXXXXXXXXXPPPIVIGPDENGIKKVIEYKFND 247
           +L RPGSANQ      K+RW               PP  VIGPDENGIKKVIEYKFND
Sbjct: 2   ALVRPGSANQPA----KIRWGELDEDDGEDLDFLLPPKQVIGPDENGIKKVIEYKFND 55


>ref|XP_004291515.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           G-like isoform 1 [Fragaria vesca subsp. vesca]
          Length = 308

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/58 (55%), Positives = 34/58 (58%)
 Frame = +2

Query: 74  SLQRPGSANQNPPQTNKVRWXXXXXXXXXXXXXXXPPPIVIGPDENGIKKVIEYKFND 247
           +L RPGSANQ      K+RW               PP  VIGPDENGIKKVIEYKFND
Sbjct: 2   ALVRPGSANQPA----KIRWGELDEDDGEDLDFLLPPKQVIGPDENGIKKVIEYKFND 55


>ref|XP_002282439.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G-B
           [Vitis vinifera]
          Length = 301

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/58 (50%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = +2

Query: 77  LQRPGSA-NQNPPQTNKVRWXXXXXXXXXXXXXXXPPPIVIGPDENGIKKVIEYKFND 247
           + R GS  N NPP+  K+RW               PP  VIGP+ENGIKKVIEYKFN+
Sbjct: 4   VDRSGSGWNSNPPKAEKIRWGELDEDDGEDLDFLLPPRQVIGPEENGIKKVIEYKFNE 61


Top