BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00036808
         (707 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGL80623.1| polyprotein [Plum bark necrosis stem pitting-asso...    75   2e-11
gb|AGL80616.1| polyprotein [Plum bark necrosis stem pitting-asso...    75   2e-11
ref|YP_001552323.1| polyprotein [Plum bark necrosis and stem pit...    73   8e-11
gb|AGL80609.1| polyprotein [Plum bark necrosis stem pitting-asso...    73   1e-10
emb|CDM63857.1| polyprotein [Plum bark necrosis stem pitting-ass...    73   1e-10
gb|AAV67979.1| alpha protein [Barley stripe mosaic virus]              71   3e-10
gb|AGL80630.1| polyprotein [Plum bark necrosis stem pitting-asso...    71   4e-10
ref|YP_008411009.1| polyprotein 1a [Blackberry vein banding asso...    70   5e-10
gb|AAA19829.1| alpha protein [Barley stripe mosaic virus]              70   5e-10
gb|AAA79147.1| alpha protein [Barley stripe mosaic virus]              70   5e-10
gb|AAA79146.1| alpha protein [Barley stripe mosaic virus]              70   5e-10
ref|NP_620753.1| viral replicase p1 [Tulare apple mosaic virus] ...    70   5e-10
emb|CAA86473.1| alpha-A protein; N-terminal region [Poa semilate...    70   7e-10
ref|NP_604474.1| alpha protein [Barley stripe mosaic virus] gi|1...    69   1e-09
gb|AAA79145.1| alpha protein [Barley stripe mosaic virus]              69   1e-09
gb|AEP04414.1| alpha protein [Barley stripe mosaic virus]              69   1e-09
ref|YP_001333649.1| 181 kDa replicase [Bell pepper mottle virus]...    68   3e-09
ref|YP_001333650.1| 126 kDa replicase [Bell pepper mottle virus]...    68   3e-09
ref|NP_059511.1| replicase [Oat golden stripe virus] gi|6018640|...    66   1e-08
ref|NP_059513.1| replicase readthrough [Chinese wheat mosaic vir...    66   1e-08

>gb|AGL80623.1| polyprotein [Plum bark necrosis stem pitting-associated virus]
          Length = 2344

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
 Frame = -3

Query: 705  TKYILKKDSYRCPADVCF-----ALSQKEYYPFQVQTHNPIMRSVLEPKQFVSGMFDVKP 541
            +KY     SYRCPAD+CF     A + ++ Y   V T N ++RSV++    V     +K 
Sbjct: 2172 SKYTEVLKSYRCPADICFWMNCVAKAPEKVYSGLVTTFNKVLRSVVKIPSAVIPSHMIKD 2231

Query: 540  RSVPLLVYTQTCKDDLRK---------QGVSHVLTIGEAQGKTYDHVILFRDNTLPKAIY 388
             +  +L +TQ+ K+   K         +   HV TI EAQGKT+++VI++R       +Y
Sbjct: 2232 VNA-ILTFTQSDKEMAYKFVAGAKLGIKNKIHVSTIHEAQGKTFENVIIYRGRQAEDDVY 2290

Query: 387  YSPFQSLVAVTRHRKTFQYV-----TVDSLLGDNSGVAALYKYI 271
             S    LV +TRH K+ +YV     T D+L  D   +     Y+
Sbjct: 2291 KSLPHRLVGLTRHTKSLKYVVHPAKTADALSKDIDNILKAKDYV 2334


>gb|AGL80616.1| polyprotein [Plum bark necrosis stem pitting-associated virus]
          Length = 2344

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
 Frame = -3

Query: 705  TKYILKKDSYRCPADVCF-----ALSQKEYYPFQVQTHNPIMRSVLEPKQFVSGMFDVKP 541
            +KY     SYRCPAD+CF     A + ++ Y   V T N ++RSV++    V     +K 
Sbjct: 2172 SKYTEVLKSYRCPADICFWMNCVAKAPEKVYSGLVTTFNKVLRSVVKIPSAVIPSHMIKD 2231

Query: 540  RSVPLLVYTQTCKDDLRK---------QGVSHVLTIGEAQGKTYDHVILFRDNTLPKAIY 388
             +  +L +TQ+ K+   K         +   HV TI EAQGKT+++VI++R       +Y
Sbjct: 2232 VNA-ILTFTQSDKEMAYKFVAGAKLGIKNKIHVSTIHEAQGKTFENVIIYRGRQAEDDVY 2290

Query: 387  YSPFQSLVAVTRHRKTFQYV-----TVDSLLGDNSGVAALYKYI 271
             S    LV +TRH K+ +YV     T D+L  D   +     Y+
Sbjct: 2291 KSLPHRLVGLTRHTKSLKYVVHPAKTADALSKDIDNILKAKDYV 2334


>ref|YP_001552323.1| polyprotein [Plum bark necrosis and stem pitting-associated virus]
            gi|158828622|gb|ABW81234.1| polyprotein [Plum bark
            necrosis stem pitting-associated virus]
          Length = 2343

 Score = 73.2 bits (178), Expect = 8e-11
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
 Frame = -3

Query: 702  KYILKKDSYRCPADVCF-----ALSQKEYYPFQVQTHNPIMRSVLEPKQFVSGMFDVKPR 538
            KY     SYRCPAD+C+     A + ++ Y   V T N ++RSV++    V     +K  
Sbjct: 2172 KYSEVLKSYRCPADICYWMNCVAKAPEKVYSGLVTTFNKVLRSVVKIPSAVIPSHLIKEA 2231

Query: 537  SVPLLVYTQTCKD---------DLRKQGVSHVLTIGEAQGKTYDHVILFRDNTLPKAIYY 385
            +  +L +TQ  K+          L  +   HV TI EAQGKT+++VI++R       +Y 
Sbjct: 2232 NA-ILTFTQADKEMAFKFVAGAKLGMKQKIHVSTIHEAQGKTFENVIIYRGRQAEDDVYR 2290

Query: 384  SPFQSLVAVTRHRKTFQYV-----TVDSLLGDNSGVAALYKYI 271
            S    LV +TRH K+ +YV     T D+L  D   +     Y+
Sbjct: 2291 SLPHRLVGLTRHTKSLKYVVHPARTADTLSKDIDNILKAKDYV 2333


>gb|AGL80609.1| polyprotein [Plum bark necrosis stem pitting-associated virus]
          Length = 2343

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 19/163 (11%)
 Frame = -3

Query: 702  KYILKKDSYRCPADVCF-----ALSQKEYYPFQVQTHNPIMRSVLEPKQFVSGMFDVKPR 538
            KY     SYRCPAD+CF     A + ++ Y   V T N ++RSV++    V     +K  
Sbjct: 2172 KYSEVLKSYRCPADICFWMNCVAKAPEKVYSGLVTTFNKVLRSVVKIPSAVIPSHLIKEV 2231

Query: 537  SVPLLVYTQTCKD---------DLRKQGVSHVLTIGEAQGKTYDHVILFRDNTLPKAIYY 385
            +  +L +TQ  K+          L  +   HV TI EAQGKT+++V+++R       +Y 
Sbjct: 2232 NA-ILTFTQADKEMAYKFVAGAKLGMKQKIHVSTIHEAQGKTFENVLIYRGRQAEDDVYK 2290

Query: 384  SPFQSLVAVTRHRKTFQYV-----TVDSLLGDNSGVAALYKYI 271
            S    LV +TRH K+ +YV     T D+L  D   +     Y+
Sbjct: 2291 SLPHRLVGLTRHTKSLRYVVHPARTADTLSKDIDSILKAKDYV 2333


>emb|CDM63857.1| polyprotein [Plum bark necrosis stem pitting-associated virus]
          Length = 2866

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
 Frame = -3

Query: 702  KYILKKDSYRCPADVCF-----ALSQKEYYPFQVQTHNPIMRSVLEPKQFVSGMFDVKPR 538
            KY     SYRCPAD+C+     A + ++ Y   V T N ++RSV++    V     +K  
Sbjct: 2170 KYSEVLKSYRCPADICYWMNCVAKAPEKVYSGLVTTFNKVLRSVVKIPSAVIPSHLIKEA 2229

Query: 537  SVPLLVYTQTCKD---------DLRKQGVSHVLTIGEAQGKTYDHVILFRDNTLPKAIYY 385
            +  +L +TQ  K+          L  +   HV TI EAQGKT+++VI++R       +Y 
Sbjct: 2230 NA-ILTFTQADKEMAFKFVAGAKLGMKQKIHVSTIHEAQGKTFENVIIYRGRQAEDDVYR 2288

Query: 384  SPFQSLVAVTRHRKTFQYV-----TVDSLLGDNSGVAALYKYI 271
            S   +LV +TRH K+ +YV     T D+L  D   +     Y+
Sbjct: 2289 SLPHTLVGLTRHTKSLKYVVHRARTADTLSKDIDNILKGKDYV 2331


>gb|AAV67979.1| alpha protein [Barley stripe mosaic virus]
          Length = 1138

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 62/160 (38%), Positives = 82/160 (51%), Gaps = 24/160 (15%)
 Frame = -3

Query: 690  KKDSYRCPADVCFALSQKEYY-----PFQVQTHNPIMRSVLE-----PKQFVSGMFDVKP 541
            K  SYR P DV F LS KE+Y     P +V T N + RS+       P++FV G+ DV  
Sbjct: 968  KLRSYRIPGDVAFYLSAKEFYKVKGVPQKVTTTNSVKRSLYARGETTPERFV-GLLDVPV 1026

Query: 540  RS-VPLLVYTQTCKDDLRK----QGVSH--VLTIGEAQGKTYDHVILFRDNTLPKAIY-- 388
            R     L + Q  K+ L      +GV    + TI EAQG TY++VIL R    P  IY  
Sbjct: 1027 RKDTHYLTFLQAEKESLMSHLIPKGVKKEAISTIHEAQGGTYENVILVRLQRTPNEIYPG 1086

Query: 387  ---YSPFQSLVAVTRHRKTFQY--VTVDSLLGDNSGVAAL 283
               ++P+  +V  +RH KTF Y  VT D LL D + V  +
Sbjct: 1087 GLRFAPY-IVVGTSRHTKTFTYCSVTDDKLLLDIADVGGI 1125


>gb|AGL80630.1| polyprotein [Plum bark necrosis stem pitting-associated virus]
          Length = 2344

 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 20/165 (12%)
 Frame = -3

Query: 705  TKYILKKDSYRCPADVCF-----ALSQKEYYPFQVQTHNPIMRSVLE-PKQFVSGMFDVK 544
            +KY     +YRCPAD+CF     A + ++ Y   V T+N ++RSV++ P   +S      
Sbjct: 2172 SKYTEVLKTYRCPADICFWMNHVAKAPEKIYSGLVTTYNKVLRSVVKIPSAVISTQMLAG 2231

Query: 543  PRSVPLLVYTQTCKDDLRK-----QGVS----HVLTIGEAQGKTYDHVILFRDNTLPKAI 391
              ++  L +TQ+ K+   K     +G +    H+ TI EAQGKT+ +V++FR       +
Sbjct: 2232 IDAI--LTFTQSDKEMANKFVAGAKGSNKFKIHISTIHEAQGKTFGNVLIFRGRQAEDDV 2289

Query: 390  YYSPFQSLVAVTRHRKTFQYV-----TVDSLLGDNSGVAALYKYI 271
            Y S    LV +TRH K+ +Y+     T D+L  D   +     Y+
Sbjct: 2290 YKSLPHRLVGLTRHTKSLKYIVHPAKTSDALSKDIDNIQKAKDYV 2334


>ref|YP_008411009.1| polyprotein 1a [Blackberry vein banding associated virus]
            gi|528899103|gb|AGS48177.1| polyprotein 1a [Blackberry
            vein banding associated virus]
          Length = 2384

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 50/152 (32%), Positives = 82/152 (53%), Gaps = 16/152 (10%)
 Frame = -3

Query: 702  KYILK--KDSYRCPADVCFALSQ------KEYYPFQVQT--HNPIMRSVLEPKQFVSGMF 553
            K+++K  K++YRCP DVCF LS       ++ Y   V +    P++RS    K+ +  + 
Sbjct: 2207 KHLIKYTKETYRCPLDVCFMLSNLKDSKGEKCYSTGVVSGLKTPVVRSF--EKRPIGSVA 2264

Query: 552  DV-KPRSVPLLVYTQTCKDDLRKQ-----GVSHVLTIGEAQGKTYDHVILFRDNTLPKAI 391
            DV K  +   L  TQ  K +++++      V  V+T+ EAQGKT++ V+LFR      ++
Sbjct: 2265 DVAKIEADVYLCQTQAEKGEMKRELNSLGRVEPVMTVHEAQGKTFEKVVLFRTKRADDSV 2324

Query: 390  YYSPFQSLVAVTRHRKTFQYVTVDSLLGDNSG 295
            + S   +LVA++RH  +  Y  + S L D  G
Sbjct: 2325 FNSQPHALVALSRHTSSLVYAALSSKLSDRVG 2356


>gb|AAA19829.1| alpha protein [Barley stripe mosaic virus]
          Length = 1138

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 62/159 (38%), Positives = 79/159 (49%), Gaps = 23/159 (14%)
 Frame = -3

Query: 690  KKDSYRCPADVCFALSQKEYY-----PFQVQTHNPIMRSVLE-----PKQFVSGMFDVKP 541
            K  SYR P DV F LS KE+Y     P +V T N + RS+       P +FVS + DV  
Sbjct: 968  KLRSYRIPGDVAFYLSAKEFYKVKGIPQKVTTFNSVKRSMYARGETTPDRFVS-LLDVPV 1026

Query: 540  RS-VPLLVYTQTCKDDLRK----QGVSH--VLTIGEAQGKTYDHVILFRDNTLPKAIYYS 382
            R     L + Q  K+ L      +GV    + TI EAQG TY++VIL R    P  IY  
Sbjct: 1027 RKDTHYLTFLQAEKESLMSHLIPKGVKKESISTIHEAQGGTYENVILVRLQRTPNEIYPG 1086

Query: 381  PFQS----LVAVTRHRKTFQY--VTVDSLLGDNSGVAAL 283
              +S    +V  +RH KTF Y  VT D LL D + V  +
Sbjct: 1087 GLRSAPYIVVGTSRHTKTFTYCSVTDDKLLLDIADVGGI 1125


>gb|AAA79147.1| alpha protein [Barley stripe mosaic virus]
          Length = 1138

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 65/166 (39%), Positives = 85/166 (51%), Gaps = 25/166 (15%)
 Frame = -3

Query: 705  TKYIL--KKDSYRCPADVCFALSQKEYY-----PFQVQTHNPIMRSVLE-----PKQFVS 562
            TK I+  K  SYR P DV F LS KE+Y     P +V T N + RS+       P++FVS
Sbjct: 961  TKTIINPKLRSYRIPGDVAFYLSAKEFYKVKGIPQKVTTFNSVKRSLYARGETTPERFVS 1020

Query: 561  GMFDVKPR-SVPLLVYTQTCKDDLRK----QGVSH--VLTIGEAQGKTYDHVILFRDNTL 403
             + DV  R +   L + Q  K+ L      +GV    + TI EAQG TY++VIL R    
Sbjct: 1021 -LLDVPVRKNTHYLTFLQAEKESLMSHLIPKGVKKESISTIHEAQGGTYENVILVRLQRT 1079

Query: 402  PKAIYYSPFQS----LVAVTRHRKTFQY--VTVDSLLGDNSGVAAL 283
            P  IY    +S    +V  +RH KTF Y  VT D LL D + V  +
Sbjct: 1080 PNEIYPGGPRSAPYIVVGTSRHTKTFTYCSVTDDKLLLDIADVGGI 1125


>gb|AAA79146.1| alpha protein [Barley stripe mosaic virus]
          Length = 1138

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 65/166 (39%), Positives = 85/166 (51%), Gaps = 25/166 (15%)
 Frame = -3

Query: 705  TKYIL--KKDSYRCPADVCFALSQKEYY-----PFQVQTHNPIMRSVLE-----PKQFVS 562
            TK I+  K  SYR P DV F LS KE+Y     P +V T N + RS+       P++FVS
Sbjct: 961  TKTIINPKLRSYRIPGDVAFYLSAKEFYKVKGIPQKVTTSNSVKRSLYARGETTPERFVS 1020

Query: 561  GMFDVKPR-SVPLLVYTQTCKDDLRK----QGVSH--VLTIGEAQGKTYDHVILFRDNTL 403
             + DV  R +   L + Q  K+ L      +GV    + TI EAQG TY++VIL R    
Sbjct: 1021 -LLDVPVRKNTHYLTFLQAEKESLMSHLIPKGVKKESISTIHEAQGGTYENVILVRLQRT 1079

Query: 402  PKAIYYSPFQS----LVAVTRHRKTFQY--VTVDSLLGDNSGVAAL 283
            P  IY    +S    +V  +RH KTF Y  VT D LL D + V  +
Sbjct: 1080 PNEIYPGGPRSAPYIVVGTSRHTKTFTYCSVTDDKLLLDIADVGGI 1125


>ref|NP_620753.1| viral replicase p1 [Tulare apple mosaic virus]
            gi|12698356|gb|AAK01481.1|AF226160_1 viral replicase p1
            [Tulare apple mosaic virus]
          Length = 1060

 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 9/162 (5%)
 Frame = -3

Query: 681  SYRCPADVCFALSQKEYYPFQVQTHNPIMRSVLEPKQFVSGMFDVKPRSVPLLVYTQTCK 502
            +YRCP D    LS+K +Y  +V+T NPI  S L      SGM     R    +++TQ  K
Sbjct: 903  TYRCPRDATAVLSEK-FYKKKVKTFNPISSS-LSLININSGMEIPAERDTLYIMHTQADK 960

Query: 501  DD-LRKQGVS--HVLTIGEAQGKTYDHVILFRDNTLPKAIY------YSPFQSLVAVTRH 349
               LR  G++  +V+T  EAQGKT+D+VIL R +     +Y        P  +LVA++RH
Sbjct: 961  CAMLRHPGINANNVMTTHEAQGKTFDNVILVRLSKTTNLLYSGKMPDAGPSHNLVALSRH 1020

Query: 348  RKTFQYVTVDSLLGDNSGVAALYKYIKARGNEILYSSHFVSG 223
            RKT +Y +V +   D+  VA+  ++ K    + L S++ VSG
Sbjct: 1021 RKTLRYYSVYADDPDDM-VASGIRWSKTLDEQAL-SNYRVSG 1060


>emb|CAA86473.1| alpha-A protein; N-terminal region [Poa semilatent virus]
          Length = 478

 Score = 70.1 bits (170), Expect = 7e-10
 Identities = 58/154 (37%), Positives = 79/154 (51%), Gaps = 23/154 (14%)
 Frame = -3

Query: 681 SYRCPADVCFALSQKEYYPFQVQT---HNPIMRSVLE-----PKQFVSGMFDVKPRSVPL 526
           SYR P DV F LS + YY    QT    N + RS+       P++F+S +     R V  
Sbjct: 312 SYRIPGDVAFYLSARGYYNGVAQTITTKNKVERSMFARGETTPERFISLLDVPVRRDVQY 371

Query: 525 LVYTQTCKDDLRK----QGVSH--VLTIGEAQGKTYDHVILFRDNTLPKAIYYSPFQS-- 370
           L + Q  K+ L      +GV    + TI E+QG T+DHVIL R    P+ IY    +S  
Sbjct: 372 LCFMQAEKESLIAYLVPKGVKKESIATIHESQGGTFDHVILVRLQRTPQEIYPGGLRSAS 431

Query: 369 --LVAVTRHRKTFQYVTV--DSL---LGDNSGVA 289
             +VAV+RH KTF Y +V  D L   + D +G+A
Sbjct: 432 YMVVAVSRHTKTFTYCSVVDDKLFIDIADENGIA 465


>ref|NP_604474.1| alpha protein [Barley stripe mosaic virus]
            gi|139475|sp|P17595.1|ALPHA_BSMV RecName: Full=Alpha-A
            protein; Includes: RecName: Full=Methyltransferase;
            Includes: RecName: Full=NTPase/helicase
            gi|331511|gb|AAA46336.1| alpha protein [Barley stripe
            mosaic virus]
          Length = 1139

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 65/166 (39%), Positives = 84/166 (50%), Gaps = 25/166 (15%)
 Frame = -3

Query: 705  TKYIL--KKDSYRCPADVCFALSQKEYY-----PFQVQTHNPIMRSVLE-----PKQFVS 562
            TK I+  K  SYR P DV F LS KE+Y     P +V T N + RS+       P++FVS
Sbjct: 962  TKTIINPKLRSYRIPGDVAFYLSAKEFYKVKGIPQKVITSNSVKRSLYARGETTPERFVS 1021

Query: 561  GMFDVKPRS-VPLLVYTQTCKDDLRK----QGVSH--VLTIGEAQGKTYDHVILFRDNTL 403
             + DV  R     L + Q  K+ L      +GV    + TI EAQG TY++VIL R    
Sbjct: 1022 -LLDVPVRKDTHYLTFLQAEKESLMSHLIPKGVKKESISTIHEAQGGTYENVILVRLQRT 1080

Query: 402  PKAIYYSPFQS----LVAVTRHRKTFQY--VTVDSLLGDNSGVAAL 283
            P  IY    +S    +V  +RH KTF Y  VT D LL D + V  +
Sbjct: 1081 PNEIYPGGPRSAPYIVVGTSRHTKTFTYCSVTDDKLLLDIADVGGI 1126


>gb|AAA79145.1| alpha protein [Barley stripe mosaic virus]
          Length = 1139

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 65/166 (39%), Positives = 84/166 (50%), Gaps = 25/166 (15%)
 Frame = -3

Query: 705  TKYIL--KKDSYRCPADVCFALSQKEYY-----PFQVQTHNPIMRSVLE-----PKQFVS 562
            TK I+  K  SYR P DV F LS KE+Y     P +V T N + RS+       P++FVS
Sbjct: 962  TKTIINPKLRSYRIPGDVAFYLSAKEFYKVKGIPQKVITSNSVKRSLYARGETTPERFVS 1021

Query: 561  GMFDVKPRS-VPLLVYTQTCKDDLRK----QGVSH--VLTIGEAQGKTYDHVILFRDNTL 403
             + DV  R     L + Q  K+ L      +GV    + TI EAQG TY++VIL R    
Sbjct: 1022 -LLDVPVRKDTHYLTFLQAEKESLMSHLIPKGVKKESISTIHEAQGGTYENVILVRLQRT 1080

Query: 402  PKAIYYSPFQS----LVAVTRHRKTFQY--VTVDSLLGDNSGVAAL 283
            P  IY    +S    +V  +RH KTF Y  VT D LL D + V  +
Sbjct: 1081 PNEIYPGGPRSAPYIVVGTSRHTKTFTYCSVTDDKLLLDIADVGGI 1126


>gb|AEP04414.1| alpha protein [Barley stripe mosaic virus]
          Length = 1139

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 65/166 (39%), Positives = 84/166 (50%), Gaps = 25/166 (15%)
 Frame = -3

Query: 705  TKYIL--KKDSYRCPADVCFALSQKEYY-----PFQVQTHNPIMRSVLE-----PKQFVS 562
            TK I+  K  SYR P DV F LS KE+Y     P +V T N + RS+       P++FVS
Sbjct: 962  TKTIINPKLRSYRIPGDVAFYLSAKEFYKVKGIPQKVITSNSVKRSLYARGETTPERFVS 1021

Query: 561  GMFDVKPRS-VPLLVYTQTCKDDLRK----QGVSH--VLTIGEAQGKTYDHVILFRDNTL 403
             + DV  R     L + Q  K+ L      +GV    + TI EAQG TY++VIL R    
Sbjct: 1022 -LLDVPVRKDTHYLTFLQAEKESLMSHLIPKGVKKESISTIHEAQGGTYENVILVRLQRT 1080

Query: 402  PKAIYYSPFQS----LVAVTRHRKTFQY--VTVDSLLGDNSGVAAL 283
            P  IY    +S    +V  +RH KTF Y  VT D LL D + V  +
Sbjct: 1081 PNEIYPGGPRSAPYIVVGTSRHTKTFTYCSVTDDKLLLDIADVGGI 1126


>ref|YP_001333649.1| 181 kDa replicase [Bell pepper mottle virus]
            gi|86264154|gb|ABC87810.1| 181 kDa replicase [Bell pepper
            mottle virus]
          Length = 1598

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
 Frame = -3

Query: 690  KKDSYRCPADVCFALSQKEYYPFQVQTHNPIMRSVLEPKQFVSGMFDVKPRSVPL----L 523
            ++ + RCPADV F L+QK  Y  QV   +   RSV +  + V G   + P S P+    L
Sbjct: 963  RRTTLRCPADVTFFLNQK--YEGQVMCTSSEKRSVSQ--EMVKGAAAINPVSKPMKGKIL 1018

Query: 522  VYTQTCKDDLRKQGVSHVLTIGEAQGKTYDHVILFRDNTLPKAIY--YSPFQSLVAVTRH 349
             +TQ  KD L  +G + V T+ E QG+TY  V L R    P +I    SP   LVA++RH
Sbjct: 1019 TFTQFDKDALLSRGYADVHTVHEVQGETYPDVSLVRLTPTPVSIIARESP-HVLVALSRH 1077

Query: 348  RKTFQYVTV 322
             K+ +Y TV
Sbjct: 1078 TKSLKYYTV 1086


>ref|YP_001333650.1| 126 kDa replicase [Bell pepper mottle virus]
            gi|86264155|gb|ABC87811.1| 126 kDa replicase [Bell pepper
            mottle virus]
          Length = 1116

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 51/129 (39%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
 Frame = -3

Query: 690  KKDSYRCPADVCFALSQKEYYPFQVQTHNPIMRSVLEPKQFVSGMFDVKPRSVPL----L 523
            ++ + RCPADV F L+QK  Y  QV   +   RSV +  + V G   + P S P+    L
Sbjct: 963  RRTTLRCPADVTFFLNQK--YEGQVMCTSSEKRSVSQ--EMVKGAAAINPVSKPMKGKIL 1018

Query: 522  VYTQTCKDDLRKQGVSHVLTIGEAQGKTYDHVILFRDNTLPKAIY--YSPFQSLVAVTRH 349
             +TQ  KD L  +G + V T+ E QG+TY  V L R    P +I    SP   LVA++RH
Sbjct: 1019 TFTQFDKDALLSRGYADVHTVHEVQGETYPDVSLVRLTPTPVSIIARESP-HVLVALSRH 1077

Query: 348  RKTFQYVTV 322
             K+ +Y TV
Sbjct: 1078 TKSLKYYTV 1086


>ref|NP_059511.1| replicase [Oat golden stripe virus] gi|6018640|emb|CAB57883.1|
            replicase [Oat golden stripe virus]
          Length = 1345

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 51/138 (36%), Positives = 69/138 (50%), Gaps = 19/138 (13%)
 Frame = -3

Query: 681  SYRCPADVCFALSQKEYYPF-QVQTHNPIMRSVLEPKQFVSGMFDVKP----------RS 535
            +YR P DV   L+ K YY   +V T N ++RS+      V G    +P          + 
Sbjct: 1182 TYRSPIDVAHYLNAKAYYDGGRVTTKNEVLRSMS-----VVGPRGTRPMNSAYCVPYVKD 1236

Query: 534  VPLLVYTQTCKDDL----RKQGVSHVLTIGEAQGKTYDHVILFRDNTLPKAIYYSPFQS- 370
               L +TQ  KDDL    R +G   V T+ EAQGKT+D+VIL R  T    IY    +S 
Sbjct: 1237 TQYLTFTQAEKDDLFKALRSKGSVSVNTVHEAQGKTFDNVILVRLKTTENPIYPGGLKSK 1296

Query: 369  ---LVAVTRHRKTFQYVT 325
               +V+VTRHR++  Y T
Sbjct: 1297 PYTIVSVTRHRRSLVYYT 1314


>ref|NP_059513.1| replicase readthrough [Chinese wheat mosaic virus]
            gi|4741233|emb|CAB41769.1| replicase readthrough [Chinese
            wheat mosaic virus]
          Length = 1858

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 55/150 (36%), Positives = 74/150 (49%), Gaps = 22/150 (14%)
 Frame = -3

Query: 681  SYRCPADVCFALSQKEYYPF-QVQTHNPIMRSVLEPKQFVSGMFDVKP----------RS 535
            +YR P DV   L++K +Y   +V T NP+MRS+        G  DVKP          + 
Sbjct: 1187 TYRSPVDVAHYLTKKSWYSGGRVTTKNPVMRSMK-----TVGPRDVKPMTSVHCVPYFKD 1241

Query: 534  VPLLVYTQTCKDDL----RKQGVSHVLTIGEAQGKTYDHVILFRDNTLPKAIY-----YS 382
               L +TQ+ K DL    R +G   V T+ E QGKT+D VI+ R  T    IY       
Sbjct: 1242 AQYLTFTQSEKTDLYKALRNKGPVTVNTVHETQGKTFDDVIVVRLETTENEIYPGGRKGQ 1301

Query: 381  PFQSLVAVTRHRKTFQYVTV--DSLLGDNS 298
            P++ +VA TRHR++  Y T   D L  D S
Sbjct: 1302 PYE-IVATTRHRRSLVYYTAIEDRLFEDIS 1330