BLASTX nr result

ID: Akebia25_contig00036024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00036024
         (250 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525397.1| Signal recognition particle receptor subunit...    62   6e-08
gb|EXB82566.1| Signal recognition particle receptor subunit beta...    58   2e-06
ref|XP_004250726.1| PREDICTED: signal recognition particle recep...    57   3e-06
ref|XP_006344449.1| PREDICTED: signal recognition particle recep...    56   4e-06
ref|XP_006438326.1| hypothetical protein CICLE_v10032463mg [Citr...    56   6e-06

>ref|XP_002525397.1| Signal recognition particle receptor subunit beta, putative
           [Ricinus communis] gi|223535360|gb|EEF37035.1| Signal
           recognition particle receptor subunit beta, putative
           [Ricinus communis]
          Length = 259

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/73 (47%), Positives = 41/73 (56%)
 Frame = +1

Query: 31  MEGIDQVINQYPQWLNRVEQQIREIPIXXXXXXXXXXXXXXXXXXXIRFFRRTKSYTIVL 210
           MEG++Q  N+  QWL +  +   +IP                    IRFFRRTKS TIVL
Sbjct: 1   MEGVEQWKNEAKQWLQQGIEFANQIPPAQLYAAAAVLLITTLFLLIIRFFRRTKSNTIVL 60

Query: 211 AGLSGSGKTVLFY 249
            GLSGSGKTVLFY
Sbjct: 61  TGLSGSGKTVLFY 73


>gb|EXB82566.1| Signal recognition particle receptor subunit beta [Morus notabilis]
          Length = 259

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/73 (42%), Positives = 40/73 (54%)
 Frame = +1

Query: 31  MEGIDQVINQYPQWLNRVEQQIREIPIXXXXXXXXXXXXXXXXXXXIRFFRRTKSYTIVL 210
           MEG ++  +Q  QW ++  Q I +IP                    +R F+RTKS TIVL
Sbjct: 1   MEGFEEWKSQAEQWASQALQYIHQIPPNQLYAASGVLLFTILFLFFVRLFKRTKSNTIVL 60

Query: 211 AGLSGSGKTVLFY 249
            GLSG+GKTVLFY
Sbjct: 61  TGLSGAGKTVLFY 73


>ref|XP_004250726.1| PREDICTED: signal recognition particle receptor subunit beta-like
           [Solanum lycopersicum]
          Length = 261

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/72 (44%), Positives = 37/72 (51%)
 Frame = +1

Query: 34  EGIDQVINQYPQWLNRVEQQIREIPIXXXXXXXXXXXXXXXXXXXIRFFRRTKSYTIVLA 213
           E ++Q+  Q  QWLN  E+ I  IP                    IR F+RT S TIVL 
Sbjct: 4   EKVEQLKIQMQQWLNEAEEFINHIPPVQLYTAVGVVLFTLILLLIIRLFKRTTSNTIVLT 63

Query: 214 GLSGSGKTVLFY 249
           GLSGSGKT LFY
Sbjct: 64  GLSGSGKTYLFY 75


>ref|XP_006344449.1| PREDICTED: signal recognition particle receptor subunit beta-like
           isoform X1 [Solanum tuberosum]
           gi|565355118|ref|XP_006344450.1| PREDICTED: signal
           recognition particle receptor subunit beta-like isoform
           X2 [Solanum tuberosum]
          Length = 268

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/70 (44%), Positives = 37/70 (52%)
 Frame = +1

Query: 40  IDQVINQYPQWLNRVEQQIREIPIXXXXXXXXXXXXXXXXXXXIRFFRRTKSYTIVLAGL 219
           ++Q+  Q  QWLN  E+ I +IP                    IR F+RT S TIVL GL
Sbjct: 13  VEQLKIQMQQWLNEAEEFINDIPPVQLYTAVGVVLSTLILLLIIRLFKRTTSNTIVLTGL 72

Query: 220 SGSGKTVLFY 249
           SGSGKT LFY
Sbjct: 73  SGSGKTYLFY 82


>ref|XP_006438326.1| hypothetical protein CICLE_v10032463mg [Citrus clementina]
           gi|568860798|ref|XP_006483901.1| PREDICTED: signal
           recognition particle receptor subunit beta-like [Citrus
           sinensis] gi|557540522|gb|ESR51566.1| hypothetical
           protein CICLE_v10032463mg [Citrus clementina]
          Length = 263

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 39/72 (54%)
 Frame = +1

Query: 34  EGIDQVINQYPQWLNRVEQQIREIPIXXXXXXXXXXXXXXXXXXXIRFFRRTKSYTIVLA 213
           EG++Q      +WLNR  + I +IP                    ++ FRR KS TIVLA
Sbjct: 6   EGMEQWKKDLEEWLNRGIEFINQIPPTQLYIACAVLLLTTALLLLLQVFRRKKSNTIVLA 65

Query: 214 GLSGSGKTVLFY 249
           GLSGSGKTVLFY
Sbjct: 66  GLSGSGKTVLFY 77


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