BLASTX nr result

ID: Akebia25_contig00035890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00035890
         (848 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]    36   6e-06
emb|CAN75028.1| hypothetical protein VITISV_026823 [Vitis vinifera]    37   9e-06
emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]    38   9e-06

>emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]
          Length = 1765

 Score = 36.2 bits (82), Expect(3) = 6e-06
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 9/109 (8%)
 Frame = -2

Query: 388  KS*TINKNGLFAVSSLYHSLQLAHTY--CFQTSSFGGSKVPTRISNFFWTTLLNKILNNG 215
            +S +++ +GLF V S + +L         F T     S+VP +I  F W     K+  N 
Sbjct: 1128 RSWSLSSSGLFTVKSFFLALSQISGLPSVFPTKLVWNSQVPFKIKFFVWLVAHKKVNTND 1187

Query: 214  --SCN*TLVNLGP----MCKENGNMINHL-LHCNLANIIQSAFFE*LKI 89
                      L P    +C E G  ++HL LHC++   +    F+  KI
Sbjct: 1188 MLQLRRPYKALSPDICMLCMERGETVDHLFLHCSMTMGLWHRLFQLTKI 1236



 Score = 35.0 bits (79), Expect(3) = 6e-06
 Identities = 25/95 (26%), Positives = 34/95 (35%), Gaps = 11/95 (11%)
 Frame = -3

Query: 840  KGGIGNQ*AYEHE*SSTTKWNWK------KFWKLCM-----EKTSGWDSRGTSSPCDCSA 694
            KGG+G         +   KW W+        W   +       ++GWD+           
Sbjct: 965  KGGLGLGRISLRNSALLGKWLWRYPREGSALWHQVILSIYGSHSNGWDANTXVRWSHRCP 1024

Query: 693  WKRSTQPMTHSPYVVSFLVRIGNRIEFWEDRWCKD 589
            WK   Q          F+V  G+RI FWED W  D
Sbjct: 1025 WKAIAQVFQDFSKFTRFIVGDGDRIRFWEDLWWGD 1059



 Score = 25.0 bits (53), Expect(3) = 6e-06
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 497  SWNLDLRRNLNNSTID 450
            SWN + RRNL++S I+
Sbjct: 1091 SWNFNFRRNLSDSEIE 1106


>emb|CAN75028.1| hypothetical protein VITISV_026823 [Vitis vinifera]
          Length = 2182

 Score = 37.0 bits (84), Expect(3) = 9e-06
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = -3

Query: 744  TSGWDSRGTSSPCDCSAWKRSTQPMTHSPYVVSFLVRIGNRIEFWEDRWCKDL---LKDF 574
            ++GWD+           WK   Q       +  ++V  G+RI FWED W  D    ++  
Sbjct: 1523 SNGWDANTLVRWSHRCPWKAIAQVFQEFSLITRYVVGNGDRIRFWEDLWRGDQPLGIQYP 1582

Query: 573  LIFHALLSKERSISQI 526
             +F  ++ K  SIS +
Sbjct: 1583 RLFRVVVDKNISISSV 1598



 Score = 33.5 bits (75), Expect(3) = 9e-06
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
 Frame = -2

Query: 376  INKNGLFAVSSLYHSLQLAH--TYCFQTSSFGGSKVPTRISNFFWTTLLNKILNNGSC-- 209
            ++ +GLF+V S + +L  +   +  F +     S+VP ++ +F W     K+  N     
Sbjct: 1647 LSSSGLFSVKSFFLALSQSSGSSQNFPSKFVWNSQVPFKVKSFVWLVAHKKVNTNDMLQV 1706

Query: 208  ----N*TLVNLGPMCKENGNMINHL-LHCNL 131
                     N+  +C ++G   +HL LHC+L
Sbjct: 1707 RRPYKALSPNICILCMKHGESTDHLFLHCSL 1737



 Score = 25.0 bits (53), Expect(3) = 9e-06
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 494  WNLDLRRNLNNSTID 450
            WNL+ RRNL++S I+
Sbjct: 1607 WNLNFRRNLSDSEIE 1621


>emb|CAN79190.1| hypothetical protein VITISV_000232 [Vitis vinifera]
          Length = 1935

 Score = 37.7 bits (86), Expect(3) = 9e-06
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 9/109 (8%)
 Frame = -2

Query: 388  KS*TINKNGLFAVSSLYHSLQLAHTY--CFQTSSFGGSKVPTRISNFFWTTLLNKILNNG 215
            +S +++ +GLF V S + +L         F T     S+VP +I +F W     K+  N 
Sbjct: 1728 RSWSLSSSGLFTVKSFFLALSQISGLPSVFPTKLVWNSQVPFKIKSFVWLVAHKKVNTND 1787

Query: 214  --SCN*TLVNLGP----MCKENGNMINHL-LHCNLANIIQSAFFE*LKI 89
                      L P    +C E G  ++HL LHC++   +    F+  KI
Sbjct: 1788 MLQLRRPYKALSPDICMLCMEQGETVDHLFLHCSMTMGLWHRLFQLTKI 1836



 Score = 32.7 bits (73), Expect(3) = 9e-06
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
 Frame = -3

Query: 840  KGGIGNQ*AYEHE*SSTTKWNWKKFWKLCMEKTSGWDSRGTSSPCD--CSAWKRSTQPMT 667
            KGG+G         +   KW     W+   E ++ W    TS   +  C+++ R  Q  +
Sbjct: 1581 KGGLGLGRISLRNSALLGKW----LWRYPREGSALWHQMVTSLSLEGYCTSFPRFFQNFS 1636

Query: 666  HSPYVVSFLVRIGNRIEFWEDRWCKD 589
                   F+V  G+RI FWED W  D
Sbjct: 1637 K---FTRFMVGDGDRIRFWEDLWWGD 1659



 Score = 25.0 bits (53), Expect(3) = 9e-06
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 497  SWNLDLRRNLNNSTID 450
            SWN + RRNL++S I+
Sbjct: 1691 SWNFNFRRNLSDSEIE 1706


Top