BLASTX nr result

ID: Akebia25_contig00035734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00035734
         (222 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297898.1| Eukaryotic peptide chain release factor subu...    57   3e-06
gb|ABK95851.1| unknown [Populus trichocarpa]                           57   3e-06
ref|XP_007049919.1| Eukaryotic release factor 1-3 isoform 1 [The...    56   6e-06

>ref|XP_002297898.1| Eukaryotic peptide chain release factor subunit 1-2 family protein
           [Populus trichocarpa] gi|222845156|gb|EEE82703.1|
           Eukaryotic peptide chain release factor subunit 1-2
           family protein [Populus trichocarpa]
          Length = 436

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   GGIGGILRYQVDMRSFDENSDEEVYEDSE 89
           GGIGGILRYQ+DMRSFDE SDEEVY+DSE
Sbjct: 408 GGIGGILRYQLDMRSFDELSDEEVYDDSE 436


>gb|ABK95851.1| unknown [Populus trichocarpa]
          Length = 243

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   GGIGGILRYQVDMRSFDENSDEEVYEDSE 89
           GGIGGILRYQ+DMRSFDE SDEEVY+DSE
Sbjct: 215 GGIGGILRYQLDMRSFDELSDEEVYDDSE 243


>ref|XP_007049919.1| Eukaryotic release factor 1-3 isoform 1 [Theobroma cacao]
           gi|590714459|ref|XP_007049920.1| Eukaryotic release
           factor 1-3 isoform 1 [Theobroma cacao]
           gi|590714463|ref|XP_007049921.1| Eukaryotic release
           factor 1-3 isoform 1 [Theobroma cacao]
           gi|508702180|gb|EOX94076.1| Eukaryotic release factor
           1-3 isoform 1 [Theobroma cacao]
           gi|508702181|gb|EOX94077.1| Eukaryotic release factor
           1-3 isoform 1 [Theobroma cacao]
           gi|508702182|gb|EOX94078.1| Eukaryotic release factor
           1-3 isoform 1 [Theobroma cacao]
          Length = 436

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +3

Query: 3   GGIGGILRYQVDMRSFDENSDEEVYEDSE 89
           GGIGGILRYQ+DMRSFDE SD+EVY+DSE
Sbjct: 408 GGIGGILRYQLDMRSFDELSDDEVYDDSE 436


Top