BLASTX nr result
ID: Akebia25_contig00035161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00035161
(469 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD63162.1| RNase H family protein [Asparagus officinalis] 65 1e-08
gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi] 64 2e-08
gb|AAY99339.1| pol-polyprotein [Silene latifolia] 63 4e-08
emb|CAN65082.1| hypothetical protein VITISV_012370 [Vitis vinifera] 62 1e-07
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o... 61 1e-07
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 61 1e-07
gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Jap... 60 2e-07
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 60 2e-07
gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Jap... 60 2e-07
ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, p... 60 3e-07
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 60 4e-07
ref|XP_003634501.1| PREDICTED: uncharacterized protein LOC100854... 59 5e-07
emb|CAN78884.1| hypothetical protein VITISV_037609 [Vitis vinifera] 59 5e-07
gb|ABA93647.1| retrotransposon protein, putative, Ty3-gypsy subc... 59 7e-07
ref|XP_003632844.1| PREDICTED: protein NYNRIN-like [Vitis vinifera] 59 7e-07
emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group] g... 59 9e-07
emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group] 59 9e-07
emb|CAN61674.1| hypothetical protein VITISV_029322 [Vitis vinifera] 59 9e-07
emb|CAN65466.1| hypothetical protein VITISV_015983 [Vitis vinifera] 59 9e-07
emb|CAN71171.1| hypothetical protein VITISV_037662 [Vitis vinifera] 59 9e-07
>gb|ABD63162.1| RNase H family protein [Asparagus officinalis]
Length = 1189
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 57 PPCLKNVRIVNIGEE---KQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGV 227
PP V VN+G+E K I + +L E EDLI ++ DVFAW+ E+M G+ P V
Sbjct: 106 PPTEDKVIQVNMGDEHDPKPIFIAEDLSSSEKEDLISLIREYIDVFAWNYEDMPGLDPKV 165
Query: 228 ICHHLNVESGIRPVKQKPR 284
HHLN++ +PVKQ+ R
Sbjct: 166 AMHHLNIDPDAKPVKQQQR 184
>gb|ACS88375.1| retrotransposon protein [Coix lacryma-jobi]
Length = 1902
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/72 (37%), Positives = 48/72 (66%)
Frame = +3
Query: 69 KNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNV 248
K V+++ E+++ + A L P+ +L+ +L+ N D FAWS E++ G++ +I H LN+
Sbjct: 838 KQVQLLEGNTERKVLISANLDPQSEGNLVTFLRENSDTFAWSAEDLKGVNRSMIEHSLNI 897
Query: 249 ESGIRPVKQKPR 284
++G RP+KQK R
Sbjct: 898 KTGYRPIKQKLR 909
>gb|AAY99339.1| pol-polyprotein [Silene latifolia]
Length = 1307
Score = 63.2 bits (152), Expect = 4e-08
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = +3
Query: 84 VNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNVESGIR 263
V I + + V L PK DL+D L++NKDVFA+S EM G+S VI H LNV S R
Sbjct: 250 VEIDPGRTVTVGVGLEPKFRADLLDLLRKNKDVFAYSAAEMPGVSREVIVHKLNVLSNAR 309
Query: 264 PVKQKPRS 287
PVKQK R+
Sbjct: 310 PVKQKMRN 317
>emb|CAN65082.1| hypothetical protein VITISV_012370 [Vitis vinifera]
Length = 1734
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +3
Query: 60 PCLKNVRIVNIG---EEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 230
P N+ +++ G + ++I + + L P E LID L+ DVFAWS E+M G+ P ++
Sbjct: 782 PISSNIELIDFGALDQPREIRIGSSLSPDERSRLIDLLRSYLDVFAWSYEDMPGLDPTIV 841
Query: 231 CHHLNVESGIRPVKQKPR 284
HHL + RPVKQK R
Sbjct: 842 QHHLPILPHARPVKQKLR 859
>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
Length = 1181
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = +3
Query: 57 PPCLKNVRIVNIGEE---KQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGV 227
PP V +N+G+E K I + +L E E+LI ++ DVFAW+ E+M G+ P V
Sbjct: 610 PPTEDKVIQINMGDESNPKPIFIAEDLSSSEKENLISLIREYIDVFAWNYEDMPGLDPKV 669
Query: 228 ICHHLNVESGIRPVKQKPR 284
H LN++ ++PVKQ+ R
Sbjct: 670 AMHRLNIDPDVKPVKQQQR 688
>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 66 LKNVRIVNIGEE---KQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICH 236
L +VNI E + + V AE+ P +LI LKRN FAWS E+M GI P + H
Sbjct: 755 LCRTEMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAH 814
Query: 237 HLNVESGIRPVKQKPR 284
LNV+ +PVKQK R
Sbjct: 815 ELNVDPTFKPVKQKRR 830
>gb|AAM01123.1|AC108884_5 Putative retroelement [Oryza sativa Japonica Group]
gi|31431922|gb|AAP53628.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1292
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/73 (38%), Positives = 47/73 (64%)
Frame = +3
Query: 66 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 245
+ V+I ++ K + + ++G ELE +++ LK+N D+FAWS +E+ G+ +I HHL
Sbjct: 529 MTTVQIDDVDPTKLVSLGGDMGEGELESILEVLKKNIDIFAWSPDEVGGVPANLIMHHLA 588
Query: 246 VESGIRPVKQKPR 284
V+ I+P KQK R
Sbjct: 589 VKPDIKPRKQKLR 601
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/63 (44%), Positives = 40/63 (63%)
Frame = +3
Query: 96 EEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNVESGIRPVKQ 275
+E+ V ++L E E+++ +L+ N DVFAW+T ++ GI P ICHHLNV P KQ
Sbjct: 37 KERYFSVGSQLPALEREEVVQFLQDNIDVFAWTTYDVSGIDPEFICHHLNVSHNAMPRKQ 96
Query: 276 KPR 284
PR
Sbjct: 97 PPR 99
>gb|AAK50400.1|AC021891_1 Putative retroelement [Oryza sativa Japonica Group]
Length = 1291
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/73 (38%), Positives = 47/73 (64%)
Frame = +3
Query: 66 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 245
+ V+I ++ K + + ++G ELE +++ LK+N D+FAWS +E+ G+ +I HHL
Sbjct: 596 MTTVQIDDVDPTKLVSLGGDMGEGELESILEVLKKNIDIFAWSPDEVGGVPANLIMHHLA 655
Query: 246 VESGIRPVKQKPR 284
V+ I+P KQK R
Sbjct: 656 VKPDIKPRKQKLR 668
>ref|XP_006828672.1| hypothetical protein AMTR_s04653p00000520, partial [Amborella
trichopoda] gi|548833479|gb|ERM96088.1| hypothetical
protein AMTR_s04653p00000520, partial [Amborella
trichopoda]
Length = 563
Score = 60.1 bits (144), Expect = 3e-07
Identities = 34/101 (33%), Positives = 54/101 (53%)
Frame = +3
Query: 66 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 245
+ N +++ IG I +R E L +LK+N D+FAW +M+GISP V+CH LN
Sbjct: 475 IDNNKVLKIGSRLNIQLR--------EQLTTFLKQNLDIFAWKHSDMVGISPQVMCHRLN 526
Query: 246 VESGIRPVKQKPRS*FRSLFIPSFPFQQKPPKLTLLIALGF 368
++ +R V+QK R + +Q ++ L+A GF
Sbjct: 527 IDPEVRGVRQKRRK------MDPARYQALKEEVDRLLACGF 561
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 59.7 bits (143), Expect = 4e-07
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +3
Query: 66 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 245
LK V + K + V +ELG +L+ L+ + D+FAWS E+M GI G+ CH L
Sbjct: 793 LKEVVVSRSDPSKVVKVGSELGEAIKGELVKCLQSHADIFAWSHEDMPGIDRGIACHKLA 852
Query: 246 VESGIRPVKQKPR 284
V+ G RPV+QK R
Sbjct: 853 VKRGARPVRQKRR 865
>ref|XP_003634501.1| PREDICTED: uncharacterized protein LOC100854161 [Vitis vinifera]
Length = 2078
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +3
Query: 60 PCLKNVRIVNIG---EEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 230
P + +++ G + ++I + + L P E LID L+ DVFAWS E+M G+ P ++
Sbjct: 984 PISSSTELIDFGAPDQPREIRIGSSLSPNERSRLIDLLRSYLDVFAWSYEDMSGLDPTIV 1043
Query: 231 CHHLNVESGIRPVKQKPR 284
HHL + RPVKQK R
Sbjct: 1044 QHHLPILPHARPVKQKLR 1061
>emb|CAN78884.1| hypothetical protein VITISV_037609 [Vitis vinifera]
Length = 1731
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +3
Query: 60 PCLKNVRIVNIGEE---KQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 230
P + V IV+ G E K++ + + L E + LI L+ DVFAWS E+M G+ P ++
Sbjct: 833 PATRTVEIVDFGTEDQPKELKIGSPLSTDERDRLIHLLRSYLDVFAWSYEDMPGLDPSIV 892
Query: 231 CHHLNVESGIRPVKQKPR 284
HHL + RPVKQK R
Sbjct: 893 QHHLPILPHARPVKQKLR 910
>gb|ABA93647.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 942
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/73 (36%), Positives = 47/73 (64%)
Frame = +3
Query: 66 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 245
+ V+I + K + + ++G +E+E +++ LK+N D+FAWS +E+ G+ +I HHL
Sbjct: 134 ITKVQIDDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFAWSPDEVGGVPADLIMHHLA 193
Query: 246 VESGIRPVKQKPR 284
V+ I+P KQK R
Sbjct: 194 VKPNIKPRKQKLR 206
>ref|XP_003632844.1| PREDICTED: protein NYNRIN-like [Vitis vinifera]
Length = 1419
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = +3
Query: 60 PCLKNVRIVNIGEEKQ---I*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 230
P ++V V+ G E Q + + + L +E + LI LK DVFAWS E+M G+ P ++
Sbjct: 325 PDTRDVETVDFGTEDQPRELKIGSPLSTEERDRLIHLLKSYLDVFAWSYEDMPGLDPSIV 384
Query: 231 CHHLNVESGIRPVKQKPR 284
HHL + +RPVKQK R
Sbjct: 385 QHHLPILPHVRPVKQKLR 402
>emb|CAD40452.2| OSJNBa0041M21.10 [Oryza sativa Japonica Group]
gi|38343994|emb|CAD40359.2| OSJNBa0093P23.5 [Oryza sativa
Japonica Group]
Length = 2074
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/70 (38%), Positives = 46/70 (65%)
Frame = +3
Query: 75 VRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLNVES 254
V+I + K + + ++G +E+E +++ LK+N D+FAWS +E+ G+ +I HHL V+
Sbjct: 1637 VQINDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFAWSPDEVGGVPADLIMHHLAVKP 1696
Query: 255 GIRPVKQKPR 284
I+P KQK R
Sbjct: 1697 NIKPRKQKLR 1706
>emb|CAE01996.2| OSJNBb0033G08.12 [Oryza sativa Japonica Group]
Length = 1847
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/73 (36%), Positives = 47/73 (64%)
Frame = +3
Query: 66 LKNVRIVNIGEEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVICHHLN 245
+ V+I + K + + ++G +E+E +++ LK+N D+FAWS +E+ G+ +I HHL
Sbjct: 950 ITKVQIDDADPTKLVSLGGDMGEEEVESILEVLKKNIDIFAWSPDEVGGVPADLIMHHLA 1009
Query: 246 VESGIRPVKQKPR 284
V+ I+P KQK R
Sbjct: 1010 VKPDIKPRKQKLR 1022
>emb|CAN61674.1| hypothetical protein VITISV_029322 [Vitis vinifera]
Length = 2155
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +3
Query: 60 PCLKNVRIVNIG---EEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 230
P + +++ G + ++I + + L P E LID L+ DVFAWS E+M G+ P ++
Sbjct: 1118 PISSSTELIDFGAPDQPREIRIGSSLSPDERSRLIDLLRSYLDVFAWSYEDMPGLDPTIV 1177
Query: 231 CHHLNVESGIRPVKQKPR 284
HHL + RPVKQK R
Sbjct: 1178 QHHLPILPHARPVKQKLR 1195
>emb|CAN65466.1| hypothetical protein VITISV_015983 [Vitis vinifera]
Length = 968
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +3
Query: 60 PCLKNVRIVNIG---EEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 230
P + +++ G + ++I + + L P E LID L+ DVFAWS E+M G+ P ++
Sbjct: 72 PISSSTELIDFGAPDQPREIRIGSSLSPDERSRLIDLLRSYLDVFAWSYEDMPGLDPTIV 131
Query: 231 CHHLNVESGIRPVKQKPR 284
HHL + RPVKQK R
Sbjct: 132 QHHLPILPHARPVKQKLR 149
>emb|CAN71171.1| hypothetical protein VITISV_037662 [Vitis vinifera]
Length = 2052
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +3
Query: 60 PCLKNVRIVNIG---EEKQI*VRAELGPKELEDLIDYLKRNKDVFAWSTEEMLGISPGVI 230
P + +++ G + ++I + + L P E LID L+ DVFAWS E+M G+ P ++
Sbjct: 352 PISSSTELIDFGAPDQPREIRIGSSLSPDERSRLIDLLRSYLDVFAWSYEDMPGLDPTIV 411
Query: 231 CHHLNVESGIRPVKQKPR 284
HHL + RPVKQK R
Sbjct: 412 QHHLPILPHARPVKQKLR 429