BLASTX nr result

ID: Akebia25_contig00034665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00034665
         (277 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006840469.1| hypothetical protein AMTR_s00045p00181910 [A...    60   4e-07
ref|XP_002515266.1| conserved hypothetical protein [Ricinus comm...    60   4e-07

>ref|XP_006840469.1| hypothetical protein AMTR_s00045p00181910 [Amborella trichopoda]
           gi|548842187|gb|ERN02144.1| hypothetical protein
           AMTR_s00045p00181910 [Amborella trichopoda]
          Length = 268

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = -3

Query: 182 HLQYKSHPR-NPRFRFKCSPLRSPSINSTSTDSKSDYKPGVFDHLFFTLFRNKMVK 18
           HLQ++ +P  NP FR + SP+RS SIN + + S   YKPG+ D +F  LFRNKMV+
Sbjct: 16  HLQHRINPLFNPNFRIRLSPIRSKSINDSVSVSSVAYKPGLLDDVFLQLFRNKMVQ 71


>ref|XP_002515266.1| conserved hypothetical protein [Ricinus communis]
           gi|223545746|gb|EEF47250.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/74 (45%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
 Frame = -3

Query: 236 MKPLALFRPFTFFSPSKDHLQYKSHPR--NPRFRFKCSPLRSPSINSTSTDSKSDYKPGV 63
           MKPLAL RP +        L+    PR  N  FR  CS L+S    +    ++S+YKPG 
Sbjct: 20  MKPLALLRPLSISVSPPSRLKL---PRLFNRSFRISCSSLQSEPEKTEDVGTRSEYKPGF 76

Query: 62  FDHLFFTLFRNKMV 21
           FD  F TLFRNKMV
Sbjct: 77  FDDFFLTLFRNKMV 90


Top