BLASTX nr result
ID: Akebia25_contig00034464
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00034464
(589 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Popu... 214 3e-71
ref|XP_007011706.1| Pentatricopeptide repeat-containing protein,... 210 3e-70
ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containi... 209 3e-69
ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [A... 209 4e-69
ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containi... 213 2e-68
ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containi... 213 2e-68
ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containi... 202 4e-67
ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 201 4e-66
ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containi... 201 4e-66
ref|XP_002515418.1| pentatricopeptide repeat-containing protein,... 201 6e-66
gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis] 211 2e-65
ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containi... 200 9e-65
ref|XP_007136936.1| hypothetical protein PHAVU_009G086500g [Phas... 197 1e-64
ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containi... 197 3e-64
ref|XP_004501390.1| PREDICTED: pentatricopeptide repeat-containi... 190 8e-60
ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arab... 197 3e-59
ref|XP_006412544.1| hypothetical protein EUTSA_v10024264mg [Eutr... 193 3e-58
ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thali... 196 4e-58
ref|XP_006282792.1| hypothetical protein CARUB_v10006400mg [Caps... 192 3e-57
ref|XP_003603286.1| Pentatricopeptide repeat-containing protein ... 180 2e-56
>ref|XP_002308709.2| hypothetical protein POPTR_0006s28060g [Populus trichocarpa]
gi|550337245|gb|EEE92232.2| hypothetical protein
POPTR_0006s28060g [Populus trichocarpa]
Length = 1115
Score = 214 bits (544), Expect(2) = 3e-71
Identities = 104/137 (75%), Positives = 125/137 (91%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+VE+MA VFDLMQ+ II+RN++TYLIIFK L + GG+RQAP ALE MR AGFVLNA+SYN
Sbjct: 139 RVEDMAFVFDLMQRHIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYN 198
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIH LLQSGF ++A+EVYRRMVSEG+KPSLKT+SALMVASGK R+ +TVMGLLEEM+++
Sbjct: 199 GLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESM 258
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPN+YT+TICIRVLG
Sbjct: 259 GLRPNIYTYTICIRVLG 275
Score = 81.3 bits (199), Expect(2) = 3e-71
Identities = 38/60 (63%), Positives = 47/60 (78%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
VV GK + G SSDEV+ L SI+DPI AL +F+SV PN+VHTTE+CN+MLE+LR HRR
Sbjct: 80 VVNGKPRKGSSSDEVLGVLHSISDPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRR 139
Score = 68.9 bits (167), Expect = 1e-09
Identities = 42/151 (27%), Positives = 80/151 (52%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + + + V+ F M K+ I+ ++++Y I+ L + G + A
Sbjct: 928 PNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHY 987
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E +++AG + +YN +I+ L +S +A+ ++ M + GI P L TY++L++ G
Sbjct: 988 FEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGI 1047
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
+ E + EE+Q +GL+PNV+T+ IR
Sbjct: 1048 VGMIEEAGKIYEELQFIGLKPNVFTYNALIR 1078
Score = 57.4 bits (137), Expect = 3e-06
Identities = 36/137 (26%), Positives = 65/137 (47%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
++++ +FD M + N Y I+ G G + A + M + G + SY
Sbjct: 910 RLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYT 969
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
L+ +L +G A+ + ++ G+ P L Y+ ++ G+ + TE + L EMQN
Sbjct: 970 ILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNR 1029
Query: 538 GLRPNVYTFTICIRVLG 588
G+ P++YT+ I LG
Sbjct: 1030 GIVPDLYTYNSLILNLG 1046
>ref|XP_007011706.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508782069|gb|EOY29325.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 1112
Score = 210 bits (534), Expect(2) = 3e-70
Identities = 104/136 (76%), Positives = 118/136 (86%)
Frame = +1
Query: 181 VEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNG 360
V M+ VF+ MQKQIIKR++ TYL +FKGL + GG+RQAP LE MR AGFVLNA+SYNG
Sbjct: 137 VGAMSFVFEFMQKQIIKRDLNTYLTVFKGLDIRGGLRQAPFGLERMRNAGFVLNAYSYNG 196
Query: 361 LIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLG 540
LIHLLLQSGF R+A+EVYRRMVSEG+KPSLKTYSALMVASGK RD TVM LLEEM+ LG
Sbjct: 197 LIHLLLQSGFSREALEVYRRMVSEGLKPSLKTYSALMVASGKRRDIGTVMDLLEEMETLG 256
Query: 541 LRPNVYTFTICIRVLG 588
L+PN+YTFTICIRVLG
Sbjct: 257 LKPNIYTFTICIRVLG 272
Score = 81.6 bits (200), Expect(2) = 3e-70
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHR 178
V GK KN LSS+EV+ LKS TD ALS+F+SVA PN+VHTTE+CN+MLE+LR HR
Sbjct: 77 VANGKCKNSLSSEEVLRVLKSFTDTKSALSYFKSVAELPNVVHTTETCNHMLEVLRAHR 135
Score = 72.4 bits (176), Expect = 9e-11
Identities = 44/139 (31%), Positives = 75/139 (53%)
Frame = +1
Query: 163 FERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLN 342
+ +T V+ +F M K+ I+ ++++Y I+ L + G + A E ++ G +
Sbjct: 937 YGKTGDVDAACELFKRMVKEGIRPDLKSYTILVDCLCLVGRVDDAMHYFEELKLTGLDPD 996
Query: 343 AFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLE 522
SYN +I+ L +SG +A+ ++ M S GI P L TY++L++ G + E E
Sbjct: 997 LVSYNLMINGLGRSGRVEEALSLFDEMWSRGISPDLYTYNSLILNLGTVGMVEQAGKFYE 1056
Query: 523 EMQNLGLRPNVYTFTICIR 579
E+Q +GL PNVYT+ IR
Sbjct: 1057 ELQLMGLEPNVYTYNALIR 1075
Score = 57.0 bits (136), Expect = 4e-06
Identities = 36/115 (31%), Positives = 59/115 (51%)
Frame = +1
Query: 244 TYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRM 423
TY + GL G + +A E M G N YN L++ ++G A E+++RM
Sbjct: 894 TYGPLIDGLLKLGRLEEAKQLFEEMVDYGCKANCAIYNILMNGYGKTGDVDAACELFKRM 953
Query: 424 VSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTFTICIRVLG 588
V EGI+P LK+Y+ L+ + + M EE++ GL P++ ++ + I LG
Sbjct: 954 VKEGIRPDLKSYTILVDCLCLVGRVDDAMHYFEELKLTGLDPDLVSYNLMINGLG 1008
>ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product
[Vitis vinifera]
Length = 1113
Score = 209 bits (531), Expect(2) = 3e-69
Identities = 103/137 (75%), Positives = 123/137 (89%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+VE+M VVF+LMQKQIIKR++ TYL IFK L + GG+R+AP+ALE MR+ GFVLN +SY
Sbjct: 137 RVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYI 196
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLLL+SGF R+A++VYRRMVSEGIKPSLKTYSALMVA GK RD ETVMGLL+EM++L
Sbjct: 197 GLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESL 256
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPN+YTFTICIR+LG
Sbjct: 257 GLRPNIYTFTICIRILG 273
Score = 79.7 bits (195), Expect(2) = 3e-69
Identities = 36/60 (60%), Positives = 47/60 (78%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
VVK K ++ +SS+EV LKSI+DP +A SFF SVA P ++HTTE+CNY+LE+LR HRR
Sbjct: 78 VVKRKPESTMSSEEVYRVLKSISDPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRR 137
Score = 62.8 bits (151), Expect = 7e-08
Identities = 45/152 (29%), Positives = 77/152 (50%)
Frame = +1
Query: 124 CPHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPL 303
CP + I+ F + VE +F M K+ I+ ++++Y I+ L + G + A
Sbjct: 928 CPLYNILMN---GFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALH 984
Query: 304 ALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASG 483
E ++ +G + YN +I+ L +S +A+ ++ M + GI P L TY+AL++ G
Sbjct: 985 YFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLG 1044
Query: 484 KIRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
E + EE+Q GL PNV+T+ IR
Sbjct: 1045 IAGMVEEAGKMYEELQLKGLEPNVFTYNALIR 1076
Score = 57.4 bits (137), Expect = 3e-06
Identities = 36/115 (31%), Positives = 58/115 (50%)
Frame = +1
Query: 244 TYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRM 423
TY + GL G + +A E M G + N YN L++ + G A E++RRM
Sbjct: 895 TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954
Query: 424 VSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVYTFTICIRVLG 588
V EGI+P LK+YS ++ + + + EE++ GL P++ + + I LG
Sbjct: 955 VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLG 1009
>ref|XP_006845376.1| hypothetical protein AMTR_s00019p00039970 [Amborella trichopoda]
gi|548847948|gb|ERN07051.1| hypothetical protein
AMTR_s00019p00039970 [Amborella trichopoda]
Length = 1123
Score = 209 bits (531), Expect(2) = 4e-69
Identities = 104/137 (75%), Positives = 120/137 (87%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
KV EM++VFDLMQKQIIKR+ ETY+ IF GL ++GGI++AP+ALE + AGFVLNAFSYN
Sbjct: 148 KVTEMSMVFDLMQKQIIKRSQETYVTIFNGLDIFGGIKRAPVALERLSHAGFVLNAFSYN 207
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLLLQSGF+R+AMEVYRRMVSE IKPSLKTYSALMVA GK +D TVM LL EM+ L
Sbjct: 208 GLIHLLLQSGFQREAMEVYRRMVSENIKPSLKTYSALMVAFGKRKDINTVMYLLHEMEAL 267
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPNVYT+TICIR+ G
Sbjct: 268 GLRPNVYTYTICIRIFG 284
Score = 79.3 bits (194), Expect(2) = 4e-69
Identities = 34/55 (61%), Positives = 48/55 (87%)
Frame = +2
Query: 5 VKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 169
+K + + GL+SD VIE L+S +DPIEAL+FF+S+A+QP I+HTTE+CNYML++LR
Sbjct: 90 IKRRIRKGLNSDGVIEVLRSYSDPIEALAFFKSIAQQPKIIHTTETCNYMLDILR 144
Score = 70.9 bits (172), Expect = 3e-10
Identities = 42/151 (27%), Positives = 79/151 (52%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ + + F + +E F M K+ I+ +++TY I+ L + G + A
Sbjct: 936 PNRAVYNILINGFGKVGDLENACEFFKRMLKEGIQPDLKTYTILVDCLCMVGRVDDALQY 995
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E ++ +G + YN +I+ L + G +A+ +++ M S+G+ P L +Y+AL++ G+
Sbjct: 996 FEALKISGHEPDLVFYNLVINGLGKDGRLEEALSLFKEMQSKGLLPDLYSYNALILHLGR 1055
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
+ E + EE+Q GL PNV+T+ IR
Sbjct: 1056 LGRVEEAGAMYEELQRKGLEPNVFTYNALIR 1086
Score = 64.7 bits (156), Expect = 2e-08
Identities = 41/130 (31%), Positives = 62/130 (47%)
Frame = +1
Query: 199 VFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGLIHLLL 378
+F+ M+K NM+TY ++ L G I +A LE M G N +YN ++ L+
Sbjct: 820 LFEKMKKVSSTPNMQTYNLLLDALGKSGKIEEARKLLEEMHIKGIKGNTITYNIMLLGLV 879
Query: 379 QSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGLRPNVY 558
+S QA+E Y ++S PS +TY L+ K + L EEM+ G +PN
Sbjct: 880 RSNKLDQAIEFYYELLSREFSPSPRTYGPLIDGLSKAGRVDEAKELFEEMREYGCKPNRA 939
Query: 559 TFTICIRVLG 588
+ I I G
Sbjct: 940 VYNILINGFG 949
>ref|XP_004237112.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Solanum lycopersicum]
Length = 1131
Score = 213 bits (542), Expect(2) = 2e-68
Identities = 103/137 (75%), Positives = 124/137 (90%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
++ +MAVVFDLMQKQII R+++TYLIIFKGL + GGIR+AP ALE M++AGFVLNA+SYN
Sbjct: 156 RINDMAVVFDLMQKQIIYRSLDTYLIIFKGLHIRGGIREAPFALERMKKAGFVLNAYSYN 215
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHL+LQ+GF ++A++VYRRM+SE +KPSLKTYSALMVA GK RDTETVM LL EM+ L
Sbjct: 216 GLIHLILQAGFWQEALKVYRRMISEKLKPSLKTYSALMVACGKRRDTETVMRLLSEMEGL 275
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPN+YTFTICIRVLG
Sbjct: 276 GLRPNIYTFTICIRVLG 292
Score = 72.8 bits (177), Expect(2) = 2e-68
Identities = 31/56 (55%), Positives = 45/56 (80%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 169
+V GK +NG+S++ V+ L+SI++P EAL+ F+SVA P +VHTT++CNYMLE LR
Sbjct: 97 LVNGKPRNGISAEGVLRNLRSISEPTEALALFKSVAEMPRVVHTTKTCNYMLEFLR 152
Score = 69.7 bits (169), Expect = 6e-10
Identities = 45/151 (29%), Positives = 78/151 (51%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + ++ +F+ M K+ I+ +++TY I+ L + A
Sbjct: 946 PNSTIYNILINGFGKAGDLKAACDLFNRMNKEGIRPDLKTYTILVDCLCSARKVDDALHY 1005
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E ++ AG + SYN +I+ L +SG ++A+ + M S GI P+L TY+ L+ G
Sbjct: 1006 FEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRGITPNLYTYNTLIFNLGI 1065
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
+ E + EE+Q LGL P+V+T+ IR
Sbjct: 1066 VGMLEEAGRMYEELQQLGLEPDVFTYNALIR 1096
Score = 56.6 bits (135), Expect = 5e-06
Identities = 35/129 (27%), Positives = 64/129 (49%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
KV++ F+ ++ + ++ +Y ++ GL G +++A L+ M+ G N ++YN
Sbjct: 998 KVDDALHYFEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRGITPNLYTYN 1057
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
LI L G +A +Y + G++P + TY+AL+ K D + + E+M
Sbjct: 1058 TLIFNLGIVGMLEEAGRMYEELQQLGLEPDVFTYNALIRGYSKSGDPDGAYAIYEKMMVG 1117
Query: 538 GLRPNVYTF 564
G PN TF
Sbjct: 1118 GCSPNSGTF 1126
>ref|XP_006350217.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Solanum tuberosum]
Length = 1080
Score = 213 bits (542), Expect(2) = 2e-68
Identities = 103/137 (75%), Positives = 124/137 (90%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
++ +MAVVFDLMQKQII R+++TYLIIFKGL + GGIR+AP ALE M++AGFVLNA+SYN
Sbjct: 105 RINDMAVVFDLMQKQIIYRSLDTYLIIFKGLHIRGGIREAPFALERMKKAGFVLNAYSYN 164
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHL+LQ+GF ++A++VYRRM+SE +KPSLKTYSALMVA GK RDTETVM LL EM+ L
Sbjct: 165 GLIHLILQAGFWQEALKVYRRMISEKLKPSLKTYSALMVACGKRRDTETVMRLLSEMEGL 224
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPN+YTFTICIRVLG
Sbjct: 225 GLRPNIYTFTICIRVLG 241
Score = 72.8 bits (177), Expect(2) = 2e-68
Identities = 31/56 (55%), Positives = 45/56 (80%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 169
+V GK +NG+S++ ++ L+SI++P EAL+ F+SVA P +VHTTE+CNYMLE LR
Sbjct: 46 LVNGKPRNGISAEGLLRNLRSISEPTEALALFKSVAEMPRVVHTTETCNYMLEYLR 101
Score = 67.8 bits (164), Expect = 2e-09
Identities = 43/151 (28%), Positives = 77/151 (50%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + ++ +F+ M K+ ++ +++TY I+ L + A
Sbjct: 895 PNSAIYNILINGFGKAGDLKAACDLFNRMNKEGVRPDLKTYTILVDCLCSARKVDDALHY 954
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E ++ AG + SYN +I+ L +SG ++A+ + M S GI P+L TY+ L+ G
Sbjct: 955 FEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRGITPNLYTYNTLIFNLGI 1014
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
+ E + EE+Q GL P+V+T+ IR
Sbjct: 1015 VGMLEEAGRMYEELQQFGLEPDVFTYNALIR 1045
Score = 56.6 bits (135), Expect = 5e-06
Identities = 35/129 (27%), Positives = 64/129 (49%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
KV++ F+ ++ + ++ +Y ++ GL G +++A L+ M+ G N ++YN
Sbjct: 947 KVDDALHYFEELKSAGLDPDLISYNLMINGLGKSGKMKEALHLLDEMKSRGITPNLYTYN 1006
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
LI L G +A +Y + G++P + TY+AL+ K D + + E+M
Sbjct: 1007 TLIFNLGIVGMLEEAGRMYEELQQFGLEPDVFTYNALIRGYSKSGDPDGAYAIYEKMMVG 1066
Query: 538 GLRPNVYTF 564
G PN TF
Sbjct: 1067 GCSPNSGTF 1075
>ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 202 bits (514), Expect(2) = 4e-67
Identities = 98/137 (71%), Positives = 118/137 (86%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+VE+MA VFDLMQKQ+I RN TYL IFK L + GGIRQAP AL MR+AGFVLNA+SYN
Sbjct: 137 RVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYN 196
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLI+ LLQ GF ++A++VY+RM+SEG+KPS+KTYSALMVA G+ RDT T+M LLEEM+ L
Sbjct: 197 GLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETL 256
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPN+YT+TICIRVLG
Sbjct: 257 GLRPNIYTYTICIRVLG 273
Score = 79.0 bits (193), Expect(2) = 4e-67
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
VV GK+K+ +SS+EVI LKSI+DP ALS+F+ V++ PNIVHT E+CNYMLE LR H R
Sbjct: 78 VVNGKSKSSVSSEEVIGALKSISDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGR 137
Score = 67.8 bits (164), Expect = 2e-09
Identities = 43/151 (28%), Positives = 77/151 (50%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + V +F M K+ I+ ++++Y I+ + L + G + A
Sbjct: 926 PNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHY 985
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E ++ G + SYN +I+ L +S +A+ ++ M + GI P L TY+AL++ G
Sbjct: 986 FEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGN 1045
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
+ + EE+Q +GL PNV+T+ IR
Sbjct: 1046 AGMVDQAGKMFEELQFMGLEPNVFTYNALIR 1076
Score = 60.5 bits (145), Expect = 3e-07
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 3/136 (2%)
Frame = +1
Query: 187 EMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+ + DL+++ ++ N+ TY I + L G I A L+ M G + +Y
Sbjct: 242 DTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYT 301
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
LI L +G +A E+Y +M + KP L TY LM G D ETV EM+
Sbjct: 302 VLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEAD 361
Query: 538 GLRPNVYTFTICIRVL 585
G P+V T+TI + L
Sbjct: 362 GYAPDVVTYTILVEAL 377
Score = 57.0 bits (136), Expect = 4e-06
Identities = 36/135 (26%), Positives = 58/135 (42%)
Frame = +1
Query: 184 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 363
EE +F+ M K N Y I+ G G + A + M + G + SY L
Sbjct: 910 EEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTIL 969
Query: 364 IHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGL 543
+ L +G A+ + + G+ P +Y+ ++ GK R E + L EM+N G+
Sbjct: 970 VECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGI 1029
Query: 544 RPNVYTFTICIRVLG 588
P +YT+ I G
Sbjct: 1030 SPELYTYNALILHFG 1044
>ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 201 bits (512), Expect(2) = 4e-66
Identities = 100/137 (72%), Positives = 119/137 (86%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
KVE+MA VF+ MQK+II+R+++TYL IFK L + GG+RQ L MR+AGFVLNA+SYN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLL+QSGF +A+EVYRRMVSEG+KPSLKTYSALMVA GK RD+E VM LL+EM++L
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPNVYTFTICIRVLG
Sbjct: 257 GLRPNVYTFTICIRVLG 273
Score = 76.6 bits (187), Expect(2) = 4e-66
Identities = 35/58 (60%), Positives = 46/58 (79%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGH 175
VVKGKT+ +S DEV+ LKS+TDPI ALS+F S++ P ++HTTE+CN+MLE LR H
Sbjct: 78 VVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVH 135
Score = 62.8 bits (151), Expect = 7e-08
Identities = 40/151 (26%), Positives = 74/151 (49%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + + + E +F M + I+ ++++Y I+ L + G + +A
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
++ G + +YN +I+ L +S +A+ +Y M + GI P L TY++LM+ G
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
E + EE+Q GL P+V+T+ IR
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
Score = 57.8 bits (138), Expect = 2e-06
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Frame = +1
Query: 184 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 363
+E FD+M+KQ I N+ TY + GL G I A L+ M G A++Y
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITF 443
Query: 364 IHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVA---SGKIRDTETVMGLLEEMQN 534
I +SG +A+E + +M ++GI P++ +A + + G++R+ +T+ L E
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN-- 501
Query: 535 LGLRPNVYTFTICIR 579
GL P+ T+ + ++
Sbjct: 502 -GLAPDSVTYNMMMK 515
Score = 57.0 bits (136), Expect = 4e-06
Identities = 38/136 (27%), Positives = 66/136 (48%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
K+ E+ ++ M + K + TY I+ L + +A ++ + F +Y
Sbjct: 838 KITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYG 897
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
LI L + G +AM ++ M G KP+ ++ L+ GKI DTET L + M N
Sbjct: 898 PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE 957
Query: 538 GLRPNVYTFTICIRVL 585
G+RP++ ++TI + L
Sbjct: 958 GIRPDLKSYTILVDCL 973
>ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 201 bits (512), Expect(2) = 4e-66
Identities = 100/137 (72%), Positives = 119/137 (86%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
KVE+MA VF+ MQK+II+R+++TYL IFK L + GG+RQ L MR+AGFVLNA+SYN
Sbjct: 137 KVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYN 196
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLL+QSGF +A+EVYRRMVSEG+KPSLKTYSALMVA GK RD+E VM LL+EM++L
Sbjct: 197 GLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDL 256
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPNVYTFTICIRVLG
Sbjct: 257 GLRPNVYTFTICIRVLG 273
Score = 76.6 bits (187), Expect(2) = 4e-66
Identities = 35/58 (60%), Positives = 46/58 (79%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGH 175
VVKGKT+ +S DEV+ LKS+TDPI ALS+F S++ P ++HTTE+CN+MLE LR H
Sbjct: 78 VVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVH 135
Score = 62.8 bits (151), Expect = 7e-08
Identities = 40/151 (26%), Positives = 74/151 (49%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + + + E +F M + I+ ++++Y I+ L + G + +A
Sbjct: 926 PNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY 985
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
++ G + +YN +I+ L +S +A+ +Y M + GI P L TY++LM+ G
Sbjct: 986 FNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGL 1045
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
E + EE+Q GL P+V+T+ IR
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIR 1076
Score = 58.9 bits (141), Expect = 1e-06
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 3/135 (2%)
Frame = +1
Query: 184 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 363
+E FD+M+KQ I N+ TY + GL G I A L M G A++YN
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIF 443
Query: 364 IHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVA---SGKIRDTETVMGLLEEMQN 534
I +SG +A+E + +M ++GI P++ +A + + G++R+ +T+ L E
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLREN-- 501
Query: 535 LGLRPNVYTFTICIR 579
GL P+ T+ + ++
Sbjct: 502 -GLAPDSVTYNMMMK 515
Score = 57.0 bits (136), Expect = 4e-06
Identities = 38/136 (27%), Positives = 66/136 (48%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
K+ E+ ++ M + K + TY I+ L + +A ++ + F +Y
Sbjct: 838 KITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYG 897
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
LI L + G +AM ++ M G KP+ ++ L+ GKI DTET L + M N
Sbjct: 898 PLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE 957
Query: 538 GLRPNVYTFTICIRVL 585
G+RP++ ++TI + L
Sbjct: 958 GIRPDLKSYTILVDCL 973
>ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545362|gb|EEF46867.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1113
Score = 201 bits (510), Expect(2) = 6e-66
Identities = 99/137 (72%), Positives = 118/137 (86%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+V +M VVF+LMQ QIIKR++ TYLIIFKGL + GG+RQ P A MR AGF LNA+SYN
Sbjct: 139 RVGDMVVVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYN 198
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLLLQSG R+A+E+YRRMV EG+KPSLKT+SALMVA+GK RDTETV LLEEM++L
Sbjct: 199 GLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESL 258
Query: 538 GLRPNVYTFTICIRVLG 588
GL+PN+YT+TICIRVLG
Sbjct: 259 GLKPNIYTYTICIRVLG 275
Score = 76.6 bits (187), Expect(2) = 6e-66
Identities = 37/60 (61%), Positives = 44/60 (73%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
V K K KN LSS EV+ L SI DP +A S+F SVA P +VHTTE+CN+MLE+LR HRR
Sbjct: 80 VAKRKPKNALSSKEVMAVLNSILDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRR 139
Score = 70.1 bits (170), Expect = 4e-10
Identities = 45/151 (29%), Positives = 78/151 (51%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P++ I + F +T V +F M ++ I+ ++++Y + L G + A
Sbjct: 928 PNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHY 987
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E +++ G L++ +YN +I L +S +A+ +Y M S GI P L TY++L++ G
Sbjct: 988 FEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGV 1047
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
E L EE+Q +GL PNV+T+ IR
Sbjct: 1048 AGMVEQAGKLYEELQFIGLEPNVFTYNALIR 1078
>gb|EXB86664.1| hypothetical protein L484_013194 [Morus notabilis]
Length = 1098
Score = 211 bits (537), Expect(2) = 2e-65
Identities = 105/137 (76%), Positives = 122/137 (89%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+VE+MAVVFD MQKQ+I RN+ TYL IFKGL + GIRQAP+ALE M RAGFVLNA+SYN
Sbjct: 122 RVEDMAVVFDFMQKQLINRNLNTYLTIFKGLYIRVGIRQAPIALEKMSRAGFVLNAYSYN 181
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLI+L+LQ+G R+A+ VY+RMVSEG KPSLKTYSALMVA GK RDTETVMGLL+EM++L
Sbjct: 182 GLIYLILQTGSFREALVVYKRMVSEGFKPSLKTYSALMVAFGKRRDTETVMGLLQEMEDL 241
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPN+YTFTICIRVLG
Sbjct: 242 GLRPNIYTFTICIRVLG 258
Score = 64.3 bits (155), Expect(2) = 2e-65
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +2
Query: 32 SSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
S++EV LKSI DP A S+F SVAR P +VHTT++CNYMLELLR + R
Sbjct: 73 SAEEVARVLKSILDPNCAFSYFMSVARLPKVVHTTDTCNYMLELLRTNGR 122
Score = 67.0 bits (162), Expect = 4e-09
Identities = 45/151 (29%), Positives = 78/151 (51%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + VE ++F M K+ I+ ++++Y I+ L + G I A
Sbjct: 911 PNCAIFNILINGFGKAGDVETACMLFKRMVKEGIRPDLKSYTILVDCLCLAGRIDDALHY 970
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E ++ +G ++ SYN +I+ L +S +A+ +Y M S I P L TY++L++ G
Sbjct: 971 FEELKLSGLNPDSVSYNLMINALGRSRRVEEALSLYDEMRSRRITPDLYTYNSLILNLGI 1030
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
E + EE+Q GL P+V+T+ IR
Sbjct: 1031 AGMVEQAGSMYEELQLRGLEPDVFTYNALIR 1061
>ref|XP_006483487.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Citrus sinensis]
Length = 1107
Score = 200 bits (508), Expect(2) = 9e-65
Identities = 99/137 (72%), Positives = 117/137 (85%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+V +M VVFDLMQKQII R++ TYL IFK L + GG+R+A ALE MR AGFVLNA+SYN
Sbjct: 131 RVTDMVVVFDLMQKQIINRDLSTYLTIFKALSLKGGLRRASFALEKMRAAGFVLNAYSYN 190
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
G IH +LQSGF R+A+ VY+R+VSEGIKPSLKTYSALMVA+GK R+ +TVM LLEEM+ L
Sbjct: 191 GFIHFILQSGFCREALAVYKRVVSEGIKPSLKTYSALMVAAGKRRNIKTVMNLLEEMERL 250
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPNVYTFTICIR+LG
Sbjct: 251 GLRPNVYTFTICIRILG 267
Score = 73.6 bits (179), Expect(2) = 9e-65
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
VVKGK +NGL+S+EVI L+S +D S+F+SVA P +VHTTE+CNYMLE+LR + R
Sbjct: 72 VVKGKPRNGLTSEEVIRVLRSFSDLDSTYSYFKSVAELPYVVHTTETCNYMLEVLRVYGR 131
Score = 73.2 bits (178), Expect = 5e-11
Identities = 46/154 (29%), Positives = 79/154 (51%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F +T VE +F M K I+ ++++Y ++ L + G + A
Sbjct: 920 PNCVIYNILINGFGKTGDVETACELFKQMIKGGIRPDLKSYSVLVDCLCMVGRVDDALHY 979
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E ++ G + SYN +I+ L +SG +A+ ++ M GI P L TY++L++ G+
Sbjct: 980 FEELKLNGLDADTISYNFMINGLGRSGRIEEALSLFDEMKKRGISPDLYTYNSLILNLGR 1039
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIRVLG 588
E L E++Q +GL PNV+T+ IR G
Sbjct: 1040 AGMVEEARKLYEQLQEMGLEPNVFTYNALIRGYG 1073
Score = 60.5 bits (145), Expect = 3e-07
Identities = 38/136 (27%), Positives = 69/136 (50%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+VEE+ +++ M + K N ++ I+ GL I +A N+ GF +Y
Sbjct: 832 RVEELLKLYEEMSFRGCKPNTISHNIVISGLVKSNSIDKAMDLFYNLVSGGFSPTPCTYG 891
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
LI L +SG +A +++ M+ G KP+ Y+ L+ GK D ET L ++M
Sbjct: 892 PLIDGLSKSGRLEEAKKLFEEMLDYGCKPNCVIYNILINGFGKTGDVETACELFKQMIKG 951
Query: 538 GLRPNVYTFTICIRVL 585
G+RP++ ++++ + L
Sbjct: 952 GIRPDLKSYSVLVDCL 967
>ref|XP_007136936.1| hypothetical protein PHAVU_009G086500g [Phaseolus vulgaris]
gi|561010023|gb|ESW08930.1| hypothetical protein
PHAVU_009G086500g [Phaseolus vulgaris]
Length = 1106
Score = 197 bits (502), Expect(2) = 1e-64
Identities = 95/137 (69%), Positives = 116/137 (84%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+VE+M VFD MQ+Q+I RN TYL IFK L + GGIRQAP AL MR+AGFVLNA+SYN
Sbjct: 130 RVEDMVFVFDFMQEQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYN 189
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIH LLQ GF ++A++VY+RM+SEG+KPS+KTYSALMVA GK R+T T+M LLEEM+ L
Sbjct: 190 GLIHFLLQPGFCKEALKVYKRMISEGMKPSMKTYSALMVALGKRRETGTIMDLLEEMKTL 249
Query: 538 GLRPNVYTFTICIRVLG 588
GL+PN+YT+TICIRVLG
Sbjct: 250 GLKPNIYTYTICIRVLG 266
Score = 75.1 bits (183), Expect(2) = 1e-64
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = +2
Query: 5 VKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
V GK+K +SS+EVI LKSI DP AL +F+ V++ PN+VHT E+CNYMLELLR H R
Sbjct: 72 VNGKSKTRVSSEEVIGVLKSILDPNSALLYFKMVSQLPNLVHTPETCNYMLELLRAHGR 130
Score = 63.9 bits (154), Expect = 3e-08
Identities = 41/151 (27%), Positives = 77/151 (50%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + V+ +F M K+ I+ ++++Y I+ + L + + A
Sbjct: 919 PNCAIYNILINGFGKAGNVDIACDLFKRMVKEGIRPDLKSYTILVECLCMSDRVDDAVHY 978
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E ++ G + SYN +I+ L +S +A+ ++ M + GI P L TY++L++ G
Sbjct: 979 FEELKLTGLDPDTVSYNLMINGLGKSHRFEEALSLFSEMKNRGITPDLYTYNSLILHFGN 1038
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
+ + EE+Q +GL PNV+T+ IR
Sbjct: 1039 AGMVDRAGKMFEELQLMGLEPNVFTYNALIR 1069
Score = 58.9 bits (141), Expect = 1e-06
Identities = 44/139 (31%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 348
K E + DL+++ +K N+ TY I + L G I A L+ M G +
Sbjct: 232 KRRETGTIMDLLEEMKTLGLKPNIYTYTICIRVLGRAGRIDDAYGILKTMDNEGCGPDVV 291
Query: 349 SYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEM 528
+Y LI L +G +AME+Y +M + G KP TY LM G + E V EM
Sbjct: 292 TYTVLIDALCVAGKLDKAMELYTKMRASGHKPDQVTYITLMGNFGNYGNLEMVKRFWSEM 351
Query: 529 QNLGLRPNVYTFTICIRVL 585
+ G P+V ++TI + L
Sbjct: 352 EADGYAPDVVSYTIIVEAL 370
>ref|XP_004293246.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1089
Score = 197 bits (500), Expect(2) = 3e-64
Identities = 96/137 (70%), Positives = 118/137 (86%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
+V +MA VFDLMQ+ II R+++TYL IFKGL + GGIR AP AL +R+ GFVLNAFSYN
Sbjct: 113 RVGDMAFVFDLMQRHIINRSLDTYLTIFKGLNIRGGIRAAPYALPRLRKHGFVLNAFSYN 172
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLI++L+QSG+ R+A++VY+ MVS+GI+PSLKTYSALMVA GK RD + VMGLL+EM+ L
Sbjct: 173 GLIYMLIQSGYCREALQVYQTMVSQGIRPSLKTYSALMVALGKRRDVQAVMGLLKEMETL 232
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPNVYTFTICIRVLG
Sbjct: 233 GLRPNVYTFTICIRVLG 249
Score = 74.7 bits (182), Expect(2) = 3e-64
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +2
Query: 14 KTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
K +N +SS+EV+ LKSI+DP A SFF+S+A P ++HTTE+CNYML+LL HRR
Sbjct: 58 KPRNSVSSEEVVRVLKSISDPTSAFSFFKSIADLPTVLHTTETCNYMLQLLGVHRR 113
Score = 57.4 bits (137), Expect = 3e-06
Identities = 39/152 (25%), Positives = 76/152 (50%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + VE +F M K+ I+ +++++ I+ G + A
Sbjct: 902 PNCAIFNILINGFSKVGDVETACELFKRMIKEGIRPDLKSFTILVDCYCQAGRVDDALHY 961
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E +R++G ++ SYN +I+ L +S +A+ +Y M I P + TY++L++ G
Sbjct: 962 FEELRQSGLDPDSVSYNLMINGLGRSRRMEEALVLYDEMRKRRITPDIFTYNSLILNLGL 1021
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIRV 582
+ E + +E+ GL P+V+T+ IR+
Sbjct: 1022 VGMVEEAGRIYKELLLTGLEPDVFTYNALIRL 1053
>ref|XP_004501390.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cicer arietinum]
Length = 1120
Score = 190 bits (482), Expect(2) = 8e-60
Identities = 92/137 (67%), Positives = 115/137 (83%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
++E+M VF+LMQKQ+I RN+ TY+ IFK L + GGI AP AL MR+AGFVLNA+SYN
Sbjct: 145 RIEDMVYVFNLMQKQVIYRNLNTYMTIFKALSIKGGIGNAPSALGKMRQAGFVLNAYSYN 204
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLLL GF ++A++VY+RM+SEG+KPS+KTYSALMVA G+ RDT +M LLEEM+NL
Sbjct: 205 GLIHLLLP-GFYKEALKVYKRMISEGMKPSMKTYSALMVALGRRRDTRNIMNLLEEMKNL 263
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPN+YT+TICIR LG
Sbjct: 264 GLRPNIYTYTICIRALG 280
Score = 67.0 bits (162), Expect(2) = 8e-60
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
VV GK K +SS+EV+ LKSI +P S+F+ V++ PN VH T++CNYMLE LR R
Sbjct: 86 VVNGKNKTRVSSEEVMSVLKSILEPSSVFSYFKLVSQLPNFVHNTDACNYMLEFLRDQGR 145
Score = 67.8 bits (164), Expect = 2e-09
Identities = 39/137 (28%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQI---IKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAF 348
K E+ + DL +K + I+ ++++Y I+ + L + G + +A E ++ G +
Sbjct: 947 KAGEIDIALDLFKKMVKEGIRPDLKSYTILVECLCITGRVDEAFQYFEELKLTGLDPDTV 1006
Query: 349 SYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEM 528
SYN +I+ L +S +A+ ++ M + GI P L TY++L+ G + + + EE+
Sbjct: 1007 SYNFIINGLGKSRRLEEALSLFSEMKNRGISPDLYTYNSLIFHLGVTGKVDLAVKMYEEL 1066
Query: 529 QNLGLRPNVYTFTICIR 579
Q +GL P+V+T+ IR
Sbjct: 1067 QLVGLEPSVFTYNALIR 1083
Score = 57.0 bits (136), Expect = 4e-06
Identities = 38/137 (27%), Positives = 63/137 (45%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
++EE +F+ M K N Y I+ G G I A + M + G + SY
Sbjct: 915 RLEEAMKIFEEMLDNQCKPNSVIYNILINGFGKAGEIDIALDLFKKMVKEGIRPDLKSYT 974
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
L+ L +G +A + + + G+ P +Y+ ++ GK R E + L EM+N
Sbjct: 975 ILVECLCITGRVDEAFQYFEELKLTGLDPDTVSYNFIINGLGKSRRLEEALSLFSEMKNR 1034
Query: 538 GLRPNVYTFTICIRVLG 588
G+ P++YT+ I LG
Sbjct: 1035 GISPDLYTYNSLIFHLG 1051
>ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata] gi|297315145|gb|EFH45568.1| hypothetical protein
ARALYDRAFT_491552 [Arabidopsis lyrata subsp. lyrata]
Length = 1114
Score = 197 bits (500), Expect(2) = 3e-59
Identities = 99/137 (72%), Positives = 115/137 (83%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
K+EEMA VFDLMQK+IIKR+ TYL IFK L V GG+RQAP AL MR GFVLNA+SYN
Sbjct: 135 KIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYN 194
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLLL+S F +AMEVYRRM+ +G +PSL+TYS+LMV GK RD E+VMGLL+EM+ L
Sbjct: 195 GLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETL 254
Query: 538 GLRPNVYTFTICIRVLG 588
GL+PNVYTFTICIRVLG
Sbjct: 255 GLKPNVYTFTICIRVLG 271
Score = 58.2 bits (139), Expect(2) = 3e-59
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 169
+++ +K LSS EV L S D + S+F+SVA N+VHTTE+CNYMLE LR
Sbjct: 76 MIRKSSKPDLSSSEVARVLMSFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALR 131
Score = 60.1 bits (144), Expect = 4e-07
Identities = 39/135 (28%), Positives = 64/135 (47%)
Frame = +1
Query: 184 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 363
+ + + +DLM + TY + GL G + +A E M G N YN L
Sbjct: 875 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNIL 934
Query: 364 IHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGL 543
I+ ++G A +++RMV EG++P LKTYS L+ + + + E++ GL
Sbjct: 935 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 994
Query: 544 RPNVYTFTICIRVLG 588
P+V + + I LG
Sbjct: 995 NPDVVCYNLIINGLG 1009
Score = 55.8 bits (133), Expect = 8e-06
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + + + +F M K+ ++ +++TY ++ L + G + +
Sbjct: 926 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 985
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMV-SEGIKPSLKTYSALMVASG 483
++ +G + YN +I+ L + +A+ ++ M S GI P L TY++L++ G
Sbjct: 986 FRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG 1045
Query: 484 KIRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
E + E+Q GL PNV+TF IR
Sbjct: 1046 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1077
>ref|XP_006412544.1| hypothetical protein EUTSA_v10024264mg [Eutrema salsugineum]
gi|557113714|gb|ESQ53997.1| hypothetical protein
EUTSA_v10024264mg [Eutrema salsugineum]
Length = 1118
Score = 193 bits (491), Expect(2) = 3e-58
Identities = 96/137 (70%), Positives = 114/137 (83%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
K+EEMA VFDLMQK+IIKR++ T+L +FK L V GG+RQAP AL MR +GF LNA+SYN
Sbjct: 138 KIEEMAYVFDLMQKRIIKRDINTFLTVFKCLSVKGGLRQAPYALRKMRESGFALNAYSYN 197
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLLL+S F +AMEVYRRM+ EG +PSL+TYS+LMV GK RD E VM LL+EM+ L
Sbjct: 198 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIEAVMALLKEMETL 257
Query: 538 GLRPNVYTFTICIRVLG 588
GL+PNVYTFTICIRVLG
Sbjct: 258 GLKPNVYTFTICIRVLG 274
Score = 58.2 bits (139), Expect(2) = 3e-58
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +2
Query: 2 VVKGKTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 169
++ +K+ SS EV + L S+ D A S+F+SVA N+VHTTE+CNYMLE LR
Sbjct: 79 MINKTSKSNPSSGEVTKVLMSLPDTDSAFSYFKSVAANSNLVHTTETCNYMLEALR 134
Score = 62.4 bits (150), Expect = 9e-08
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + + + +F M K+ ++ +++TY ++ L + G + +
Sbjct: 930 PNCAIYNILINGFGKAGEADAACELFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 989
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMV-SEGIKPSLKTYSALMVASG 483
++ +G + YN +I+ L +S +A+E+Y M S GI P L TY++L++ G
Sbjct: 990 FRELKESGLDPDVVCYNLIINGLGKSQRLEEALELYNEMKNSRGITPDLYTYNSLILNMG 1049
Query: 484 KIRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
E + +E+Q GL PNV+TF IR
Sbjct: 1050 IAGMVEGAGKIYDEIQRAGLEPNVFTFNALIR 1081
Score = 57.0 bits (136), Expect = 4e-06
Identities = 39/135 (28%), Positives = 63/135 (46%)
Frame = +1
Query: 184 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 363
E + + +DL+ TY + GL G + +A E M N YN L
Sbjct: 879 EALDLYYDLISDGDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYDCRPNCAIYNIL 938
Query: 364 IHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGL 543
I+ ++G A E+++RMV EG++P LKTYS L+ + + + E++ GL
Sbjct: 939 INGFGKAGEADAACELFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 998
Query: 544 RPNVYTFTICIRVLG 588
P+V + + I LG
Sbjct: 999 DPDVVCYNLIINGLG 1013
>ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis
thaliana] gi|7270088|emb|CAB79903.1| putative protein
[Arabidopsis thaliana] gi|332660567|gb|AEE85967.1|
proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 196 bits (497), Expect(2) = 4e-58
Identities = 98/137 (71%), Positives = 115/137 (83%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
K+EEMA VFDLMQK+IIKR+ TYL IFK L V GG++QAP AL MR GFVLNA+SYN
Sbjct: 133 KLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYN 192
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLLL+S F +AMEVYRRM+ EG +PSL+TYS+LMV GK RD ++VMGLL+EM+ L
Sbjct: 193 GLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETL 252
Query: 538 GLRPNVYTFTICIRVLG 588
GL+PNVYTFTICIRVLG
Sbjct: 253 GLKPNVYTFTICIRVLG 269
Score = 55.5 bits (132), Expect(2) = 4e-58
Identities = 27/46 (58%), Positives = 33/46 (71%)
Frame = +2
Query: 32 SSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 169
SS+EV LKS D + S+F+SVA N+VHTTE+CNYMLE LR
Sbjct: 84 SSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALR 129
Score = 60.1 bits (144), Expect = 4e-07
Identities = 39/135 (28%), Positives = 65/135 (48%)
Frame = +1
Query: 184 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 363
+ + + +DLM + TY + GL G + +A E M G N YN L
Sbjct: 873 DALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 364 IHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGL 543
I+ ++G A +++RMV EG++P LKTYS L+ + + + +E++ GL
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 544 RPNVYTFTICIRVLG 588
P+V + + I LG
Sbjct: 993 NPDVVCYNLIINGLG 1007
Score = 59.3 bits (142), Expect = 8e-07
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + + + +F M K+ ++ +++TY ++ L + G + +
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRM-VSEGIKPSLKTYSALMVASG 483
+ ++ +G + YN +I+ L +S +A+ ++ M S GI P L TY++L++ G
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 484 KIRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
E + E+Q GL PNV+TF IR
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075
>ref|XP_006282792.1| hypothetical protein CARUB_v10006400mg [Capsella rubella]
gi|482551497|gb|EOA15690.1| hypothetical protein
CARUB_v10006400mg [Capsella rubella]
Length = 1114
Score = 192 bits (489), Expect(2) = 3e-57
Identities = 97/137 (70%), Positives = 112/137 (81%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
KVEEM VFD MQK+IIKR+ TYL IFK L V GG+RQ+P AL MR GFVLNA+SYN
Sbjct: 135 KVEEMVYVFDFMQKRIIKRDANTYLTIFKSLSVKGGLRQSPYALRKMREFGFVLNAYSYN 194
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLLL+S F +AMEVY RM+ EG +PSL+TYS+LMV GK RD E+VMGLL+EM+ L
Sbjct: 195 GLIHLLLKSRFCTEAMEVYSRMILEGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETL 254
Query: 538 GLRPNVYTFTICIRVLG 588
GL+PNVYTFTICIRVLG
Sbjct: 255 GLKPNVYTFTICIRVLG 271
Score = 55.8 bits (133), Expect(2) = 3e-57
Identities = 28/50 (56%), Positives = 34/50 (68%)
Frame = +2
Query: 20 KNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLR 169
K+ LSS EV LKS D S+F+SVA N+VH+TE+CNYMLE LR
Sbjct: 82 KSNLSSIEVTRVLKSFPDIDSKFSYFKSVADNSNLVHSTETCNYMLEALR 131
Score = 59.3 bits (142), Expect = 8e-07
Identities = 39/135 (28%), Positives = 64/135 (47%)
Frame = +1
Query: 184 EEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYNGL 363
E + + +DL+ + TY + GL G + +A E M G N YN L
Sbjct: 875 EALDLYYDLISDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 934
Query: 364 IHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNLGL 543
I+ ++G A +++RMV EG++P LKTYS L+ + + + E++ GL
Sbjct: 935 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGL 994
Query: 544 RPNVYTFTICIRVLG 588
P+V + + I LG
Sbjct: 995 NPDVVCYNLIINGLG 1009
Score = 57.4 bits (137), Expect = 3e-06
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F + + + +F M K+ ++ +++TY ++ L + G + +
Sbjct: 926 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 985
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMV-SEGIKPSLKTYSALMVASG 483
++ +G + YN +I+ L +S +A+ ++ M S G+ P L TY++L++ G
Sbjct: 986 FRELKESGLNPDVVCYNLIINGLGKSERLEEALMLFSEMKNSRGVTPDLYTYNSLILNLG 1045
Query: 484 KIRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
E + E+Q GL PNV+TF IR
Sbjct: 1046 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1077
>ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 180 bits (457), Expect(2) = 2e-56
Identities = 86/137 (62%), Positives = 111/137 (81%)
Frame = +1
Query: 178 KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLALENMRRAGFVLNAFSYN 357
++E+M VFDLMQK++I RN+ TY+ IFK L + GGI +AP AL M GF+LNA+SYN
Sbjct: 146 RIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYN 205
Query: 358 GLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGKIRDTETVMGLLEEMQNL 537
GLIHLLL GF +A++VY+RM+SEG+KPS+KTYSALMVA G+ DT +M LLEEM+++
Sbjct: 206 GLIHLLLP-GFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSI 264
Query: 538 GLRPNVYTFTICIRVLG 588
GLRPN+YT+TICIR LG
Sbjct: 265 GLRPNIYTYTICIRALG 281
Score = 65.5 bits (158), Expect(2) = 2e-56
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +2
Query: 14 KTKNGLSSDEVIETLKSITDPIEALSFFQSVARQPNIVHTTESCNYMLELLRGHRR 181
K K +S +EV+ LKSI+DP A S+F+ V++ N VHTT++CNYMLE+LR RR
Sbjct: 91 KNKTSVSEEEVMTILKSISDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRR 146
Score = 70.5 bits (171), Expect = 3e-10
Identities = 42/151 (27%), Positives = 82/151 (54%)
Frame = +1
Query: 127 PHHRIMQLYA*AFERT*KVEEMAVVFDLMQKQIIKRNMETYLIIFKGLRVWGGIRQAPLA 306
P+ I + F ++ +++ +F M K+ I+ ++++Y I+ + L + G I +A
Sbjct: 934 PNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQY 993
Query: 307 LENMRRAGFVLNAFSYNGLIHLLLQSGFRRQAMEVYRRMVSEGIKPSLKTYSALMVASGK 486
E ++ G + SYN +I+ L +S +A+ ++ M + GI P L TY+AL++ G
Sbjct: 994 FEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGI 1053
Query: 487 IRDTETVMGLLEEMQNLGLRPNVYTFTICIR 579
+ + + EE+Q +GL P+V+T+ IR
Sbjct: 1054 AGKVDVAVKMYEELQLVGLEPSVFTYNALIR 1084