BLASTX nr result
ID: Akebia25_contig00034161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00034161
(605 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera] 62 2e-07
emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera] 52 2e-06
emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera] 58 2e-06
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 51 3e-06
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 52 3e-06
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc... 52 3e-06
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera] 57 4e-06
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 52 4e-06
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 56 7e-06
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 56 7e-06
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 56 9e-06
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 56 9e-06
>emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]
Length = 1380
Score = 61.6 bits (148), Expect = 2e-07
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +3
Query: 3 SQWICMFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
S + +F K LDY +L+ F C+C+PF+ P + HKLQ RS++C+FL Y+ H
Sbjct: 486 SPYFTLFRKHLDYKSLRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSLNH 536
>emb|CAN68623.1| hypothetical protein VITISV_010681 [Vitis vinifera]
Length = 846
Score = 51.6 bits (122), Expect(2) = 2e-06
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +3
Query: 36 DYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
DY+ LK F C CFP L P + HKLQ RS EC FL Y+ KH
Sbjct: 323 DYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKH 362
Score = 26.2 bits (56), Expect(2) = 2e-06
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 181 VYIS*DVRFNEQHFNSSKT 237
VYIS DV FNE F+ SKT
Sbjct: 374 VYISRDVIFNETSFSYSKT 392
>emb|CAN82452.1| hypothetical protein VITISV_003326 [Vitis vinifera]
Length = 1139
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 3 SQWICMFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
S + +F + DY +L+ F C+C+PF+ P + HKLQ RS++C+FL Y+ H
Sbjct: 571 SPYFTLFRRHPDYKSLRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSLNH 621
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 51.2 bits (121), Expect(2) = 3e-06
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +3
Query: 18 MFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
+F + DY++L+ F C C+P L P + HKLQ RS +C FL Y++ H
Sbjct: 669 LFNQTPDYSSLRVFGCACWPHLRPYNTHKLQFRSKQCTFLGYSTLH 714
Score = 25.8 bits (55), Expect(2) = 3e-06
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +1
Query: 163 CLDPTM--VYIS*DVRFNEQHFNSSK 234
CLDP+ VYIS DV F+E +F +K
Sbjct: 719 CLDPSTGRVYISRDVIFDETNFPFAK 744
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 52.4 bits (124), Expect(2) = 3e-06
Identities = 21/46 (45%), Positives = 33/46 (71%)
Frame = +3
Query: 18 MFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
+F +Q DY +L++F C C+P L P + HKLQ RS +C+FL +++ H
Sbjct: 657 LFHQQPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNLH 702
Score = 24.6 bits (52), Expect(2) = 3e-06
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 181 VYIS*DVRFNEQHFNSSK 234
VYIS DV F+EQ F SK
Sbjct: 715 VYISRDVTFDEQEFPFSK 732
>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 52.4 bits (124), Expect(2) = 3e-06
Identities = 21/46 (45%), Positives = 33/46 (71%)
Frame = +3
Query: 18 MFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
+F +Q DY +L++F C C+P L P + HKLQ RS +C+FL +++ H
Sbjct: 546 LFHQQPDYKSLRTFGCACWPNLRPYNTHKLQFRSKQCVFLGFSNLH 591
Score = 24.6 bits (52), Expect(2) = 3e-06
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1
Query: 181 VYIS*DVRFNEQHFNSSK 234
VYIS DV F+EQ F SK
Sbjct: 604 VYISRDVTFDEQEFPFSK 621
>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
Length = 920
Score = 57.0 bits (136), Expect = 4e-06
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +3
Query: 3 SQWICMFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
S + +F + DY +L+ F C+C+PF+ P + HKLQ RS++C FL Y+ H
Sbjct: 499 SPYFTLFRRHPDYKSLRVFGCLCYPFIQPYNTHKLQYRSVQCFFLGYSLNH 549
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 51.6 bits (122), Expect(2) = 4e-06
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = +3
Query: 36 DYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
DY+ LK F C CFP L P + HKLQ RS EC FL Y+ KH
Sbjct: 741 DYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKH 780
Score = 25.0 bits (53), Expect(2) = 4e-06
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1
Query: 181 VYIS*DVRFNEQHFNSSKT 237
VYIS DV FNE F SKT
Sbjct: 792 VYISHDVIFNETSFPYSKT 810
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 56.2 bits (134), Expect = 7e-06
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +3
Query: 3 SQWICMFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
S + + KQ DY+ L+ F C CFPFL P + HKL RS ECIFL Y++ H
Sbjct: 775 SLYFKLLNKQPDYSCLRVFGCSCFPFLRPYNSHKLDYRSQECIFLGYSTAH 825
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 56.2 bits (134), Expect = 7e-06
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +3
Query: 3 SQWICMFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
S + +F + DY + + F C+C+PF+ P + HKLQ RS++C+FL Y+ H
Sbjct: 696 SPYFTLFRRHPDYKSFRVFGCLCYPFIRPYNTHKLQYRSVQCLFLGYSLNH 746
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 55.8 bits (133), Expect = 9e-06
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +3
Query: 18 MFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
+F KQ DY+ L+ F CVC+P L P + HKLQ RS +C+FL Y+S H
Sbjct: 516 LFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLH 561
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 55.8 bits (133), Expect = 9e-06
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +3
Query: 18 MFGKQLDYTNLKSF*CVCFPFLLPCDIHKLQLRSIECIFLSYNSKH 155
+F KQ DY+ L+ F CVC+P L P + HKLQ RS +C+FL Y+S H
Sbjct: 516 LFHKQPDYSVLRIFGCVCWPNLRPYNSHKLQFRSKQCVFLGYSSLH 561