BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00033207
         (542 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi...   278   8e-73
ref|XP_007013880.1| Tetratricopeptide repeat (TPR)-like superfam...   276   2e-72
ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containi...   270   2e-70
ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containi...   269   3e-70
ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containi...   263   3e-68
ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citr...   262   3e-68
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,...   261   8e-68
ref|XP_002307852.2| hypothetical protein POPTR_0006s007001g, par...   261   1e-67
ref|XP_007203708.1| hypothetical protein PRUPE_ppa019391mg, part...   257   1e-66
ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containi...   254   1e-65
ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutr...   253   2e-65
gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Moru...   252   4e-65
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar...   251   1e-64
emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|726998...   251   1e-64
ref|XP_002869359.1| pentatricopeptide repeat-containing protein ...   250   2e-64
ref|XP_006285536.1| hypothetical protein CARUB_v10006977mg [Caps...   247   1e-63
ref|XP_007152620.1| hypothetical protein PHAVU_004G145400g [Phas...   240   2e-61
ref|XP_006857035.1| hypothetical protein AMTR_s00065p00020910 [A...   240   2e-61
ref|XP_003576535.1| PREDICTED: pentatricopeptide repeat-containi...   239   2e-61
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi...   237   1e-60

>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Vitis vinifera]
           gi|297745081|emb|CBI38673.3| unnamed protein product
           [Vitis vinifera]
          Length = 900

 Score =  278 bits (710), Expect = 8e-73
 Identities = 131/180 (72%), Positives = 156/180 (86%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC K+G   LGTKWF LMLENGV+PN+ATFGM+MSLYQKG N+ ++E+AF QMRSF + C
Sbjct: 217 ACYKQGHVELGTKWFRLMLENGVRPNVATFGMVMSLYQKGWNVADSEYAFSQMRSFGITC 276

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           QSAYSAMITI+TR+ LYDKAEE++ F++EDKVILNLENWLV +NAYSQQGKL+EA R+L 
Sbjct: 277 QSAYSAMITIYTRMSLYDKAEEVIDFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLF 336

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M  AG  PNIVAYN LITGYGK S+MDAAQ  F+NL+N+GLEPDE+TYRSM+EGWGRA+
Sbjct: 337 SMQNAGFSPNIVAYNMLITGYGKASNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAE 396



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 37/157 (23%), Positives = 79/157 (50%), Gaps = 2/157 (1%)
 Frame = -3

Query: 465  NIATFGMLMSLYQKGGNLVEAEFAFHQMR--SFKLQCQSAYSAMITIFTRLGLYDKAEEI 292
            ++ ++  +++ Y +  +L +      QM+   F +  +  Y+ M+  + + G  +    +
Sbjct: 728  DVISYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLE-VYNCMLDSYGKEGQIESFRSV 786

Query: 291  MGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGK 112
            +  MKE     +   + + IN Y +QG +EE   +L  + E+G+ P++ +YNTLI  YG 
Sbjct: 787  LRRMKESSCASDHYTYNIMINIYGEQGWIEEVANVLTELKESGLGPDLCSYNTLIKAYGI 846

Query: 111  VSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
               ++ A    K ++  G++PD  TY +++    + D
Sbjct: 847  AGMVEDAVVLVKEMRENGIQPDRITYINLINALRKND 883


>ref|XP_007013880.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao] gi|508784243|gb|EOY31499.1| Tetratricopeptide
           repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 916

 Score =  276 bits (706), Expect = 2e-72
 Identities = 132/180 (73%), Positives = 154/180 (85%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           ACSK+GL  LG KWF +MLE+G +PN+ATFGMLM LYQKG N  EAEF F QMR+  + C
Sbjct: 231 ACSKKGLVELGAKWFRMMLEHGFRPNVATFGMLMGLYQKGWNASEAEFTFSQMRNSGIVC 290

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           QSAYSAMITI+TRL LYDKAE+I+GFM++DKVILNLENWLV +NAYSQ+GKLEEA ++L+
Sbjct: 291 QSAYSAMITIYTRLSLYDKAEDIIGFMRKDKVILNLENWLVMLNAYSQRGKLEEAEQVLV 350

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M EAG  PNIVAYNTLITGYGK S+MDAAQ  F ++Q +GLEPDETTYRSM+EGWGRAD
Sbjct: 351 SMQEAGFSPNIVAYNTLITGYGKSSNMDAAQLVFLSIQQVGLEPDETTYRSMIEGWGRAD 410



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 41/154 (26%), Positives = 74/154 (48%)
 Frame = -3

Query: 462  IATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIFTRLGLYDKAEEIMGF 283
            IA +G    L      + E +F       F +  + AY+ M+  + + G  +K   ++  
Sbjct: 752  IAAYGQNKDLKNMSSTVREMQF-----NGFSVSLE-AYNCMLDTYGKDGQMEKFRSVLQR 805

Query: 282  MKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGKVSD 103
            MKE    L+   + + IN Y +Q  ++E   +L  + E G+ P++ +YNTLI  YG    
Sbjct: 806  MKESNCALDRYTYNIMINIYGEQRWIDEVAAVLTELKECGLGPDLCSYNTLIKAYGIAGM 865

Query: 102  MDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            ++ A    K ++  G+EPD  TY +++    + D
Sbjct: 866  VEDAVGLIKEMRENGVEPDNITYNNLITALRKND 899


>ref|XP_004242995.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1201

 Score =  270 bits (690), Expect = 2e-70
 Identities = 126/180 (70%), Positives = 155/180 (86%)
 Frame = -3

Query: 540  ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
            AC K+GL  LG KWFH+MLENGVQPNIATFG+LM+LYQKG ++ EAEFAF  MR+ K+ C
Sbjct: 516  ACHKKGLVELGAKWFHMMLENGVQPNIATFGLLMALYQKGWHVEEAEFAFSMMRNLKIMC 575

Query: 360  QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
            QSAYS+M+TI+TR+ LYDKAEEI+GF+++D+VILNLENWLV +NAY QQGKL EA ++L 
Sbjct: 576  QSAYSSMLTIYTRMRLYDKAEEIIGFLRKDEVILNLENWLVLLNAYCQQGKLLEAEQVLA 635

Query: 180  LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
             MN+AG  PNIVAYNTLITGYGK+S+M  AQ  F +++ +G+EPDETTYRSM+EGWGRAD
Sbjct: 636  SMNQAGFSPNIVAYNTLITGYGKISNMRDAQRLFGDIKRVGMEPDETTYRSMIEGWGRAD 695



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 36/205 (17%)
 Frame = -3

Query: 507  TKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIF 328
            ++ F  ML+ G  PN  TF +++ +Y K      A   F   +   L    +Y+ +I  +
Sbjct: 980  SRLFDEMLKRGFLPNTVTFNVMLDVYGKSRLFKRAREVFSMAKKCGLADVISYNTLIAAY 1039

Query: 327  TRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAG----- 163
             R   +      +  M  +   ++LE +   ++AY ++G++E+ R +L  + E+G     
Sbjct: 1040 GRSKDFKNMSSTVKKMHFNGFSVSLEAYNCMLDAYGKEGQMEKFRNVLERLKESGHSSDH 1099

Query: 162  -------------------------------IRPNIVAYNTLITGYGKVSDMDAAQCFFK 76
                                           I P++ +YNTLI  YG    ++ A    K
Sbjct: 1100 YTYNIMINIYGELGWIEEVSEVLAELKESGSIGPDLCSYNTLIKAYGIAGMVERAVDLVK 1159

Query: 75   NLQNIGLEPDETTYRSMVEGWGRAD 1
             ++  G+EPD  TY +++    + D
Sbjct: 1160 EMRENGIEPDRITYTNLINALRKND 1184



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
 Frame = -3

Query: 495  HLMLENG-VQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSA--MITIFT 325
            +LML+N  V+ +  TF +++ +Y K G L EA      M   K      Y    M  I+ 
Sbjct: 877  YLMLKNSDVKLDTITFSVVVRMYMKSGALEEACSVLDDMDRQKNIVPDTYLLRDMFRIYQ 936

Query: 324  RLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIV 145
            R    DK  ++   + +  VI + E +   IN  ++   ++E  RL   M + G  PN V
Sbjct: 937  RCDKKDKLADLYYKLVKRGVIWDQEMYSCVINCCARALPVDELSRLFDEMLKRGFLPNTV 996

Query: 144  AYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
             +N ++  YGK      A+  F   +  GL  D  +Y +++  +GR+
Sbjct: 997  TFNVMLDVYGKSRLFKRAREVFSMAKKCGL-ADVISYNTLIAAYGRS 1042


>ref|XP_006343601.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565353364|ref|XP_006343602.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 937

 Score =  269 bits (688), Expect = 3e-70
 Identities = 127/180 (70%), Positives = 154/180 (85%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC K+GL  LG KWFH+MLENGVQPNIATFGMLM+LYQKG ++ EAEFAF  MR+ K+ C
Sbjct: 252 ACHKKGLVELGAKWFHMMLENGVQPNIATFGMLMALYQKGWHVEEAEFAFSMMRNLKIMC 311

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           QSAYS+M+TI+TR+ LYDKAEEI+GF+++D+VILNLENWLV +NAY QQGKL EA ++L 
Sbjct: 312 QSAYSSMLTIYTRMRLYDKAEEIIGFLRKDEVILNLENWLVLLNAYCQQGKLLEAEQVLA 371

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            MNEAG  PNIVAYNTLITGYGK+S+M  AQ  F +L+ +G++PDETTYRSM+EGWGR D
Sbjct: 372 SMNEAGFSPNIVAYNTLITGYGKISNMLDAQRLFGDLKRVGVDPDETTYRSMIEGWGRTD 431



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 36/205 (17%)
 Frame = -3

Query: 507  TKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIF 328
            ++ F  ML+ G  PN  TF +++ +Y K      A   F   +   L    +Y+ +I  +
Sbjct: 716  SRLFDEMLKRGFLPNTVTFNVMLDVYGKSRLFKRAREVFSMAKKCGLADVISYNTLIAAY 775

Query: 327  TRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAG----- 163
             R   +      +  M  +   ++LE +   ++AY ++G++E+ R +L  + E+G     
Sbjct: 776  GRSKDFKNMSSTVKKMHFNGFSVSLEAYNCMLDAYGKEGQMEKFRNVLERLKESGHSSDH 835

Query: 162  -------------------------------IRPNIVAYNTLITGYGKVSDMDAAQCFFK 76
                                           I P++ +YNTLI  YG    ++ A    K
Sbjct: 836  YTYNIMINIYGELGWIEEVSNVLAELKESGSIGPDLCSYNTLIKAYGIAGMVERAVDLVK 895

Query: 75   NLQNIGLEPDETTYRSMVEGWGRAD 1
             ++  G+EPD  TY +++    + D
Sbjct: 896  EMRKNGIEPDRITYTNLINALRKND 920



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 3/167 (1%)
 Frame = -3

Query: 495  HLMLENG-VQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSA--MITIFT 325
            +LML+N  V+ +  TF +++ +Y K G L EA      M   K      Y    M+ I+ 
Sbjct: 613  YLMLKNSNVKLDTITFSVVVRMYMKSGALEEACSVLDDMDKQKNIVPDTYLLRDMLRIYQ 672

Query: 324  RLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIV 145
            R    DK  ++   + +  VI + E +   IN  ++   ++E  RL   M + G  PN V
Sbjct: 673  RCDKKDKLADLYYKLVKRGVIWDQEMYSCVINCCARALPVDELSRLFDEMLKRGFLPNTV 732

Query: 144  AYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
             +N ++  YGK      A+  F   +  GL  D  +Y +++  +GR+
Sbjct: 733  TFNVMLDVYGKSRLFKRAREVFSMAKKCGL-ADVISYNTLIAAYGRS 778


>ref|XP_006474045.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Citrus sinensis]
          Length = 915

 Score =  263 bits (671), Expect = 3e-68
 Identities = 125/179 (69%), Positives = 151/179 (84%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC+KRG   LG KWFH+MLE  VQPN+ATFGMLM LY+K  N+ EAEFAF+QMR   L C
Sbjct: 228 ACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWNVEEAEFAFNQMRKLGLVC 287

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           +SAYSAMITI+TRL LY+KAEE++  ++EDKV+ NLENWLV +NAYSQQGKLEEA  +L+
Sbjct: 288 ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLV 347

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
            M EAG  PNIVAYNTL+TGYGKVS+M+AAQ  F +++++GLEPDETTYRSM+EGWGRA
Sbjct: 348 SMREAGFSPNIVAYNTLMTGYGKVSNMEAAQRLFLSIKDVGLEPDETTYRSMIEGWGRA 406



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 40/157 (25%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
 Frame = -3

Query: 465  NIATFGMLMSLYQKGGNLVEAEFAFHQMR--SFKLQCQSAYSAMITIFTRLGLYDKAEEI 292
            ++ ++  +++ Y +  NL        +M+   F +  + AY++M+  + + G  +  + +
Sbjct: 741  DVISYNTIIAAYGQNKNLESMSSTVQEMQVDGFSVSLE-AYNSMLDAYGKEGQMENFKNV 799

Query: 291  MGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGK 112
            +  MKE     +   + + I+ Y +QG + E   +L  + E G+RP++ +YNTLI  YG 
Sbjct: 800  LRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGI 859

Query: 111  VSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
               ++ A    K ++  G+EPD+ TY +M+    R D
Sbjct: 860  AGMVEDAVGLVKEMRENGIEPDKITYTNMITALRRND 896


>ref|XP_006453565.1| hypothetical protein CICLE_v10007430mg [Citrus clementina]
           gi|557556791|gb|ESR66805.1| hypothetical protein
           CICLE_v10007430mg [Citrus clementina]
          Length = 851

 Score =  262 bits (670), Expect = 3e-68
 Identities = 125/179 (69%), Positives = 151/179 (84%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC+KRG   LG KWFH+MLE  VQPN+ATFGMLM LY+K  ++ EAEFAF+QMR   L C
Sbjct: 164 ACNKRGCVELGAKWFHMMLECDVQPNVATFGMLMGLYKKSWSVEEAEFAFNQMRKLGLVC 223

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           +SAYSAMITI+TRL LY+KAEE++  ++EDKV+ NLENWLV +NAYSQQGKLEEA  +L+
Sbjct: 224 ESAYSAMITIYTRLSLYEKAEEVIRLIREDKVVPNLENWLVMLNAYSQQGKLEEAELVLV 283

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
            M EAG  PNIVAYNTLITGYGKVS+MDA+Q  F +++++GLEPDETTYRSM+EGWGRA
Sbjct: 284 SMREAGFSPNIVAYNTLITGYGKVSNMDASQRLFLSIKDVGLEPDETTYRSMIEGWGRA 342



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 40/157 (25%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
 Frame = -3

Query: 465  NIATFGMLMSLYQKGGNLVEAEFAFHQMR--SFKLQCQSAYSAMITIFTRLGLYDKAEEI 292
            ++ ++  +++ Y +  NL        +M+   F +  + AY++M+  + + G  +  + +
Sbjct: 677  DVISYNTIIAAYGQNKNLESMSSTVQEMQFDGFSVSLE-AYNSMLDAYGKEGQMENFKNV 735

Query: 291  MGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGK 112
            +  MKE     +   + + I+ Y +QG + E   +L  + E G+RP++ +YNTLI  YG 
Sbjct: 736  LRRMKETSCTFDHYTYNIMIDIYGEQGWINEVVGVLTELKECGLRPDLCSYNTLIKAYGI 795

Query: 111  VSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
               ++ A    K ++  G+EPD+ TY +M+    R D
Sbjct: 796  AGMVEDAVGLVKEMRENGIEPDKITYTNMITALQRND 832


>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 955

 Score =  261 bits (667), Expect = 8e-68
 Identities = 128/178 (71%), Positives = 149/178 (83%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           ACS+RG   LG KWF +MLE GVQPNIATFGMLM LYQKG N+ EAEF F +MRSF + C
Sbjct: 270 ACSRRGNMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGIIC 329

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           QSAYSAMITI+TRL LY+KAEEI+G M EDKV +N+ENWLV +NAYSQQG+LEEA ++L+
Sbjct: 330 QSAYSAMITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQVLV 389

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGR 7
            M EA   PNIVA+NTLITGYGK+S+M AAQ  F ++QN GLEPDETTYRSM+EGWGR
Sbjct: 390 EMQEASFSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGR 447



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 48/204 (23%), Positives = 88/204 (43%), Gaps = 35/204 (17%)
 Frame = -3

Query: 507  TKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRS---------------- 376
            ++ F  ML+ G  PN  TF +++ +Y K     +A+  F   R                 
Sbjct: 735  SRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKAKELFWMARKRGLVDVISYNTVIAAY 794

Query: 375  -----FKLQCQS--------------AYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNL 253
                 FK    +              AY+ M+  + + G  +    ++  MK+     + 
Sbjct: 795  GHNKDFKNMASAVRNMQFDGFSVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDH 854

Query: 252  ENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKN 73
              + + IN Y +QG ++E   +L  + E G+RP++ +YNTLI  YG    ++ A    K 
Sbjct: 855  YTYNIMINIYGEQGWIDEVAGVLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKE 914

Query: 72   LQNIGLEPDETTYRSMVEGWGRAD 1
            ++  G+EPD+ TY +++    + D
Sbjct: 915  MRENGIEPDKITYSNLITALQKND 938


>ref|XP_002307852.2| hypothetical protein POPTR_0006s007001g, partial [Populus
           trichocarpa] gi|550335167|gb|EEE91375.2| hypothetical
           protein POPTR_0006s007001g, partial [Populus
           trichocarpa]
          Length = 738

 Score =  261 bits (666), Expect = 1e-67
 Identities = 126/178 (70%), Positives = 147/178 (82%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           +CSKRG   L  KWF +MLE GVQPN+ATFGM+M LYQKG N+ EAEF+F QMRSF + C
Sbjct: 53  SCSKRGSVELSGKWFRMMLELGVQPNVATFGMVMGLYQKGWNVEEAEFSFAQMRSFGIIC 112

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           QSAYSAMITI+TRL LYDKAEE++G M++DKV+LNLENWLV +NAYSQQGKLE+A +LL+
Sbjct: 113 QSAYSAMITIYTRLSLYDKAEEVIGLMRDDKVVLNLENWLVLLNAYSQQGKLEKAEQLLV 172

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGR 7
            M EA   P IVAYN LITGYGK S+M AAQ  F  +QN GLEPD+TTYRSM+EGWGR
Sbjct: 173 AMQEAKFSPTIVAYNILITGYGKASNMVAAQRLFSGIQNAGLEPDDTTYRSMIEGWGR 230



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 41/168 (24%), Positives = 81/168 (48%)
 Frame = -3

Query: 507  TKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIF 328
            ++ F+ ML+ G  PN  TF +++ +Y K     +A   F   R   L    +Y+ +I  +
Sbjct: 518  SRLFNEMLQRGFDPNTITFNVMLDVYAKAKLFNKARELFMMARKRGLVDVISYNTIIAAY 577

Query: 327  TRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNI 148
             R   +      +  M+ D   ++LE +   ++AY ++G++E  R +L  M  +    + 
Sbjct: 578  GRKRDFKNMASTIHTMQFDGFSVSLEAYNCVLDAYGKEGQMESFRSVLQRMKNSSCTADH 637

Query: 147  VAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
              YN ++  YG++  +D        L+  GL PD  +Y ++++ +G A
Sbjct: 638  YTYNIMMNIYGELGWIDEVAGVLTELRECGLGPDLCSYNTLIKAYGIA 685



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
 Frame = -3

Query: 510 GTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAY--SAMI 337
           G K +  +  +G+  ++  F +++ +Y K G+L +A      M   K      Y    M+
Sbjct: 411 GEKLYMKLKSSGIGLDVIAFSIVIRMYVKAGSLKDACSVLETMEKEKDMVPDIYLFRDML 470

Query: 336 TIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIR 157
            ++ + G+ DK  ++   + +  V+ + E +   IN  ++   + E  RL   M + G  
Sbjct: 471 RVYQQCGMMDKLNDLYFKILKSGVVWDQELYNCLINCCARALPVGELSRLFNEMLQRGFD 530

Query: 156 PNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGR 7
           PN + +N ++  Y K    + A+  F   +  GL  D  +Y +++  +GR
Sbjct: 531 PNTITFNVMLDVYAKAKLFNKARELFMMARKRGL-VDVISYNTIIAAYGR 579


>ref|XP_007203708.1| hypothetical protein PRUPE_ppa019391mg, partial [Prunus persica]
           gi|462399239|gb|EMJ04907.1| hypothetical protein
           PRUPE_ppa019391mg, partial [Prunus persica]
          Length = 766

 Score =  257 bits (657), Expect = 1e-66
 Identities = 124/180 (68%), Positives = 147/180 (81%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC K G   LG KWF +MLE+ VQPNIATFGMLM LYQKG N+ EAEF F QMR+F + C
Sbjct: 81  ACCKLGRLELGGKWFRMMLEHEVQPNIATFGMLMVLYQKGWNVEEAEFTFFQMRNFGILC 140

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           QSAYS+MITI+TRL L++KAEEI+G +KED+V LNL+NWLV INAY QQGK+++A  +L+
Sbjct: 141 QSAYSSMITIYTRLNLFEKAEEIIGLLKEDRVRLNLDNWLVMINAYCQQGKVDDAELVLV 200

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M EAG  PNI+AYNTLITGYGK S MDAA   F+ ++N GLEPDETTYRSM+EGWGRAD
Sbjct: 201 SMQEAGFSPNIIAYNTLITGYGKASKMDAADHLFQGIKNAGLEPDETTYRSMIEGWGRAD 260



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 35/201 (17%)
 Frame = -3

Query: 498  FHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIF--- 328
            F  ML+ G  PN  TF +++ +Y K   L +A   F   + + L    +Y+ +I  +   
Sbjct: 549  FDEMLQCGFVPNTITFNVMLDVYGKAKLLKKARKLFWMAQKWGLVDMISYNTIIAAYGRN 608

Query: 327  --------------------------TRLGLYDKAEEIMGF------MKEDKVILNLENW 244
                                      T L  Y K  ++  F      MKE     +   +
Sbjct: 609  KDLRNMSSTFGEMQFKGFSVSLEAYNTMLDAYGKESQMERFRSVLQRMKETSCASDHYTY 668

Query: 243  LVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQN 64
             + IN Y +QG ++E   +L  + E G+ P++ +YNTLI  YG    ++ A    K ++ 
Sbjct: 669  NIMINIYGEQGWIDEVADVLTELKECGLGPDLCSYNTLIKAYGIAGMVEDAVHLVKEMRE 728

Query: 63   IGLEPDETTYRSMVEGWGRAD 1
             G++PD+ TY +++    + D
Sbjct: 729  NGIQPDKITYINLINALRKND 749


>ref|XP_004287149.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 885

 Score =  254 bits (649), Expect = 1e-65
 Identities = 124/180 (68%), Positives = 144/180 (80%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           ACSK G   LG KWF +MLE GVQPN+ATFGMLM+LYQKG N+ EAEF F +MR+F + C
Sbjct: 200 ACSKLGRVELGAKWFAMMLEYGVQPNVATFGMLMALYQKGWNVEEAEFTFSRMRNFGIVC 259

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           QSAYSAMITI+TR+ LY++AEEI+G MKED VI NL+NWLV INAY QQGK+E A   ++
Sbjct: 260 QSAYSAMITIYTRMSLYERAEEIIGLMKEDGVIPNLDNWLVVINAYCQQGKVEAAELGVV 319

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M EAG  PNIVAYNTLITGYGK S MDAA   F  ++ +GLEPDETTYRSM+EGWGR D
Sbjct: 320 SMKEAGFSPNIVAYNTLITGYGKASKMDAAHHLFLGIKKVGLEPDETTYRSMIEGWGRTD 379



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 50/204 (24%), Positives = 87/204 (42%), Gaps = 35/204 (17%)
 Frame = -3

Query: 507  TKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIF 328
            ++ F  ML+ G  PN  TF +++ +Y K   L +A   F   + + L    +Y+ +I  +
Sbjct: 665  SEMFDQMLKRGFVPNTITFNVMLDVYGKAKLLKKARKLFLMAQKWDLVDTISYNTIIAAY 724

Query: 327  TR-----------------------------LGLYDKAEEIMGF------MKEDKVILNL 253
             R                             L  Y K  ++  F      MKE     + 
Sbjct: 725  GRNKDFKSMSSAVREMQLNGFSVSLEAYNSMLDAYGKENQMEQFRSVLQRMKETSCGSDH 784

Query: 252  ENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKN 73
              +   IN Y +QG ++E   +L  + E G+ P++ +YNTLI  YG    ++ A    K 
Sbjct: 785  HTYNTMINIYGEQGWIDEVAGVLTELKECGLGPDLCSYNTLIKAYGIAGMVEDAVYLLKE 844

Query: 72   LQNIGLEPDETTYRSMVEGWGRAD 1
            ++  G+EPD+ TY +++    + D
Sbjct: 845  MRENGVEPDKITYINLIAALRKND 868


>ref|XP_006412665.1| hypothetical protein EUTSA_v10024344mg [Eutrema salsugineum]
           gi|557113835|gb|ESQ54118.1| hypothetical protein
           EUTSA_v10024344mg [Eutrema salsugineum]
          Length = 916

 Score =  253 bits (647), Expect = 2e-65
 Identities = 123/180 (68%), Positives = 146/180 (81%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           ACSK+G   LG+KWF LMLE GV+PN+AT GMLM LYQK  N+ EAEFAF  MR F + C
Sbjct: 231 ACSKKGNVKLGSKWFQLMLELGVRPNVATIGMLMGLYQKNRNVDEAEFAFTHMRRFGIVC 290

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           +SAYSAMIT++TRL LY KAEE++  MKED+V LNLENWLV +NAYSQQGK+E+A  +L+
Sbjct: 291 ESAYSAMITLYTRLRLYGKAEEVIHLMKEDRVRLNLENWLVVLNAYSQQGKMEQAESVLI 350

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M  AG  PNI+AYNT+ITGYGKVS M+AAQ  F  L +IGLEPDET+YRSM+EGWGRAD
Sbjct: 351 SMEAAGFSPNIIAYNTIITGYGKVSKMEAAQSLFNRLCDIGLEPDETSYRSMIEGWGRAD 410



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 42/168 (25%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
 Frame = -3

Query: 498  FHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMR--SFKLQCQSAYSAMITIFT 325
            F L   +GV  ++ ++  +++ Y +  +      A   M+   F +  + AY++M+  + 
Sbjct: 734  FLLAKRHGVV-DVISYNTIIAAYGQNKDFTNMSSAIRNMQFDGFSVSLE-AYNSMLDAYG 791

Query: 324  RLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIV 145
            +    +K   I+  MK+     +   + + IN Y +QG ++E   +L  + E+G+ P++ 
Sbjct: 792  KDKQMEKFRSILNRMKKSTCETDHYTYNIMINIYGEQGWIDEVTDVLRELKESGLGPDLC 851

Query: 144  AYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            +YNTLI  YG    ++ A    K ++  G+ PD+ TY ++V    R D
Sbjct: 852  SYNTLIKAYGIGGMVEEAVGLVKEMRVKGITPDKVTYTNLVTALRRND 899


>gb|EXB42922.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
          Length = 889

 Score =  252 bits (644), Expect = 4e-65
 Identities = 122/180 (67%), Positives = 146/180 (81%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           ACSK G   LG KWF +MLE+GV+PN+ATFGMLM LYQK  N+ EAEF F +MR     C
Sbjct: 204 ACSKLGRVELGAKWFRMMLEHGVRPNVATFGMLMGLYQKSWNVEEAEFTFTRMRDLGTVC 263

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           QSAYSA+ITI+TRL LY+KAEE++GFM+ED+VI NL+N LV +NAYSQQGKLE+A  +L 
Sbjct: 264 QSAYSALITIYTRLNLYEKAEEVIGFMREDEVIPNLDNCLVMLNAYSQQGKLEDAEMVLA 323

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M ++G  PNIVAYNTLITGYGK S MDAAQ  F  ++N+GLEP+ETTYRSM+EGWGRAD
Sbjct: 324 SMQKSGFPPNIVAYNTLITGYGKASKMDAAQRLFTCIRNVGLEPNETTYRSMIEGWGRAD 383



 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 41/157 (26%), Positives = 81/157 (51%), Gaps = 2/157 (1%)
 Frame = -3

Query: 465  NIATFGMLMSLYQKGGNLVEAEFAFH--QMRSFKLQCQSAYSAMITIFTRLGLYDKAEEI 292
            ++ ++  L++ Y +  +L +   AF   Q + F +  + AY++M+  + +    +    +
Sbjct: 717  DVISYNTLIAAYGRNKDLTKMSSAFKLMQFKGFSVSLE-AYNSMLDAYGKERQMESFRSV 775

Query: 291  MGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGK 112
            +  MKE     +   + + IN Y +QG ++E   +L  + E G RP++ +YNTLI  YG 
Sbjct: 776  LHKMKESNCASDHYTYNIMINIYGEQGWIDEVAEVLKDLKECGFRPDLYSYNTLIKAYGI 835

Query: 111  VSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
               ++ A    K ++  G+EPD+ TY +++    R D
Sbjct: 836  AGMVEDAVGLVKEMRENGIEPDKVTYVNLITAMKRND 872



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 42/165 (25%), Positives = 75/165 (45%)
 Frame = -3

Query: 498  FHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIFTRL 319
            F  ML+ G  PN  T  +L+ LY K     +A   F     + L    +Y+ +I  + R 
Sbjct: 672  FDEMLQRGFIPNTITLNVLLDLYGKAKLFKKAMKLFWMAEKWGLVDVISYNTLIAAYGRN 731

Query: 318  GLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAY 139
                K       M+     ++LE +   ++AY ++ ++E  R +L  M E+    +   Y
Sbjct: 732  KDLTKMSSAFKLMQFKGFSVSLEAYNSMLDAYGKERQMESFRSVLHKMKESNCASDHYTY 791

Query: 138  NTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
            N +I  YG+   +D      K+L+  G  PD  +Y ++++ +G A
Sbjct: 792  NIMINIYGEQGWIDEVAEVLKDLKECGFRPDLYSYNTLIKAYGIA 836


>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635625|sp|O65567.2|PP342_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g30825, chloroplastic; Flags: Precursor
           gi|332660415|gb|AEE85815.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  251 bits (640), Expect = 1e-64
 Identities = 120/180 (66%), Positives = 144/180 (80%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC+K+G   L +KWFH+MLE GV+PN+AT GMLM LYQK  N+ EAEFAF  MR F + C
Sbjct: 219 ACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVC 278

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           +SAYS+MITI+TRL LYDKAEE++  MK+D+V L LENWLV +NAYSQQGK+E A  +L+
Sbjct: 279 ESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILV 338

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M  AG  PNI+AYNTLITGYGK+  M+AAQ  F  L NIGLEPDET+YRSM+EGWGRAD
Sbjct: 339 SMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRAD 398



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
 Frame = -3

Query: 498  FHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMR--SFKLQCQSAYSAMITIFT 325
            F L   +GV  ++ ++  +++ Y K  +      A   M+   F +  + AY+ ++  + 
Sbjct: 722  FLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLE-AYNTLLDAYG 779

Query: 324  RLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIV 145
            +    +K   I+  MK+     +   + + IN Y +QG ++E   +L  + E+G+ P++ 
Sbjct: 780  KDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLC 839

Query: 144  AYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            +YNTLI  YG    ++ A    K ++   + PD+ TY ++V    R D
Sbjct: 840  SYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRND 887


>emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|7269983|emb|CAB79800.1|
           puative protein [Arabidopsis thaliana]
          Length = 1075

 Score =  251 bits (640), Expect = 1e-64
 Identities = 120/180 (66%), Positives = 144/180 (80%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC+K+G   L +KWFH+MLE GV+PN+AT GMLM LYQK  N+ EAEFAF  MR F + C
Sbjct: 390 ACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVC 449

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           +SAYS+MITI+TRL LYDKAEE++  MK+D+V L LENWLV +NAYSQQGK+E A  +L+
Sbjct: 450 ESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILV 509

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M  AG  PNI+AYNTLITGYGK+  M+AAQ  F  L NIGLEPDET+YRSM+EGWGRAD
Sbjct: 510 SMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRAD 569



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
 Frame = -3

Query: 498  FHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMR--SFKLQCQSAYSAMITIFT 325
            F L   +GV  ++ ++  +++ Y K  +      A   M+   F +  + AY+ ++  + 
Sbjct: 893  FLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLE-AYNTLLDAYG 950

Query: 324  RLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIV 145
            +    +K   I+  MK+     +   + + IN Y +QG ++E   +L  + E+G+ P++ 
Sbjct: 951  KDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLC 1010

Query: 144  AYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            +YNTLI  YG    ++ A    K ++   + PD+ TY ++V    R D
Sbjct: 1011 SYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRND 1058


>ref|XP_002869359.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315195|gb|EFH45618.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 906

 Score =  250 bits (638), Expect = 2e-64
 Identities = 118/180 (65%), Positives = 146/180 (81%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC+K+G   L +KWF +MLE GV+PN+AT GMLM LYQK  N+ EAEFAF  MR F++ C
Sbjct: 221 ACTKKGNVKLASKWFQMMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFSHMRKFEIVC 280

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           +SAYS+MITI+TRL LY+KAEE++  MK+D+V L LENWLV +NAYSQQGK+E+A  +L+
Sbjct: 281 ESAYSSMITIYTRLRLYEKAEEVINLMKQDRVRLKLENWLVMLNAYSQQGKMEQAESVLI 340

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M  AG  PNI+AYNTLITGYGKVS M+AA+  F  L +IGLEPDET+YRSM+EGWGRAD
Sbjct: 341 SMEAAGFAPNIIAYNTLITGYGKVSKMEAAKSLFHRLSDIGLEPDETSYRSMIEGWGRAD 400



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 40/168 (23%), Positives = 82/168 (48%), Gaps = 2/168 (1%)
 Frame = -3

Query: 498  FHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMR--SFKLQCQSAYSAMITIFT 325
            F L   +GV  ++ ++  +++ Y K  +      A   M+   F +  + AY+ ++  + 
Sbjct: 724  FLLAKRHGVV-DVISYNTIIAAYGKNKDFTNMSSAIKNMQFDGFSVSLE-AYNTLLDAYG 781

Query: 324  RLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIV 145
            +    +K   I+  MK+     +   + + IN Y +QG ++E   +L  + E+G+ P++ 
Sbjct: 782  KDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVAGVLKELKESGLGPDLC 841

Query: 144  AYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            +YNTLI  YG    ++ A    K ++   + PD+ TY ++V    + D
Sbjct: 842  SYNTLIKAYGIGGMVEEAVGLVKEMRGKNITPDKVTYTNLVTALRKND 889


>ref|XP_006285536.1| hypothetical protein CARUB_v10006977mg [Capsella rubella]
           gi|482554241|gb|EOA18434.1| hypothetical protein
           CARUB_v10006977mg [Capsella rubella]
          Length = 907

 Score =  247 bits (631), Expect = 1e-63
 Identities = 120/180 (66%), Positives = 143/180 (79%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC+K+G   LG+KWF LMLE GV+PN+AT GMLM LYQK  N+ EAEFAF QMR F + C
Sbjct: 223 ACAKKGNVKLGSKWFQLMLELGVRPNVATIGMLMGLYQKNWNVDEAEFAFSQMRKFGIVC 282

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           +SAYSAMITI+TRL LY KAEE++  MK+D+V L LENWLV +NAYSQQGK+E+A  +L 
Sbjct: 283 ESAYSAMITIYTRLRLYVKAEEVIDLMKKDRVRLKLENWLVMLNAYSQQGKMEQAESVLT 342

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
            M  AG   NI+AYNTLITGYGKVS M+AAQ  F    +IG+EPDET+YRSM+EGWGRAD
Sbjct: 343 SMEAAGFSQNIIAYNTLITGYGKVSKMEAAQSLFHRFYDIGIEPDETSYRSMIEGWGRAD 402



 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 50/203 (24%), Positives = 88/203 (43%), Gaps = 37/203 (18%)
 Frame = -3

Query: 498  FHLMLENGVQPNIATFGMLMSLYQKG-------GNLVEAE--------------FAFHQM 382
            F  M+ NG  PN  TF +L+ +Y K        G  + A+               A+ Q 
Sbjct: 691  FEEMIRNGFTPNTVTFNVLLDVYGKAKLFEKVNGLFLLAKRHGVVDVISYNTIIAAYGQN 750

Query: 381  RSFKLQCQS--------------AYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENW 244
            + FK    +              AY++M+  +   G   + E+    +K  K     +++
Sbjct: 751  KDFKNMSSAIKNMQFDGFSVSLEAYNSMLDAY---GKDKQMEKFRSILKRMKSTCGSDHY 807

Query: 243  L--VQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNL 70
               + IN Y +QG ++E   +L  + E+G+ P++ +YNTLI  YG    ++ A    K +
Sbjct: 808  TYNIMINIYGEQGWIDEVTEVLTELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEM 867

Query: 69   QNIGLEPDETTYRSMVEGWGRAD 1
            +   + PD+ TY ++V    R D
Sbjct: 868  RGKKIIPDKVTYTNLVTALRRND 890


>ref|XP_007152620.1| hypothetical protein PHAVU_004G145400g [Phaseolus vulgaris]
           gi|561025929|gb|ESW24614.1| hypothetical protein
           PHAVU_004G145400g [Phaseolus vulgaris]
          Length = 852

 Score =  240 bits (612), Expect = 2e-61
 Identities = 118/181 (65%), Positives = 142/181 (78%), Gaps = 1/181 (0%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC KR L  LGTKWF +ML+ GV PN+AT GMLM LY+KG NL EAEFAF QMR F + C
Sbjct: 166 ACCKRNLVKLGTKWFRMMLDYGVAPNVATVGMLMGLYRKGWNLEEAEFAFSQMRGFGIVC 225

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           +SAYS+MITI+TRL LY+KA  ++ FM+ D+V+ NLENWLV +NAYSQQGKLE+A R+L 
Sbjct: 226 ESAYSSMITIYTRLRLYEKALCVIEFMRRDEVVPNLENWLVMLNAYSQQGKLEDAERVLE 285

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNL-QNIGLEPDETTYRSMVEGWGRA 4
            M EAG   NI+AYNT+ITGYGK   MD+AQ  F  + Q+  L+PDETTYRSM+EGWGRA
Sbjct: 286 AMQEAGFCANIIAYNTMITGYGKAGKMDSAQRLFMRIRQSSQLDPDETTYRSMIEGWGRA 345

Query: 3   D 1
           D
Sbjct: 346 D 346



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
 Frame = -3

Query: 465  NIATFGMLMSLYQKGGNLVEAEFAFHQMR--SFKLQCQSAYSAMITIFTRLGLYDKAEEI 292
            ++ T+  +++ Y K  +         +M    F +  + AY++M+  + + G  +    +
Sbjct: 680  DVITYNTIVAAYGKNKDFDNMSLTVQKMEFDGFSVSLE-AYNSMLDAYGKNGQMETFRSV 738

Query: 291  MGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGK 112
            +  MK+     +   +   IN Y +QG + E   +L  + E G+RP++ +YNTLI  YG 
Sbjct: 739  LQRMKDSNCASDHYTYNTMINIYGEQGWINEVATVLTELKECGLRPDLCSYNTLIKAYGI 798

Query: 111  VSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
               ++ A    K ++  G+EPD+TTY +++    R D
Sbjct: 799  AGMVEEAVGLIKEMRKNGIEPDKTTYTNLITALRRND 835



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/168 (20%), Positives = 79/168 (47%)
 Frame = -3

Query: 507  TKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIF 328
            ++ F  M++    P+  TF +++ ++ K     +    ++  +   L     Y+ ++  +
Sbjct: 632  SRLFDEMIQREFVPSTITFNVMLDVFGKAKLFKKVRRLYNMAKKEGLVDVITYNTIVAAY 691

Query: 327  TRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNI 148
             +   +D     +  M+ D   ++LE +   ++AY + G++E  R +L  M ++    + 
Sbjct: 692  GKNKDFDNMSLTVQKMEFDGFSVSLEAYNSMLDAYGKNGQMETFRSVLQRMKDSNCASDH 751

Query: 147  VAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
              YNT+I  YG+   ++        L+  GL PD  +Y ++++ +G A
Sbjct: 752  YTYNTMINIYGEQGWINEVATVLTELKECGLRPDLCSYNTLIKAYGIA 799


>ref|XP_006857035.1| hypothetical protein AMTR_s00065p00020910 [Amborella trichopoda]
           gi|548861118|gb|ERN18502.1| hypothetical protein
           AMTR_s00065p00020910 [Amborella trichopoda]
          Length = 903

 Score =  240 bits (612), Expect = 2e-61
 Identities = 119/179 (66%), Positives = 142/179 (79%)
 Frame = -3

Query: 537 CSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQ 358
           CSKR L   GTKWF +ML  GV+PN AT GMLMSLYQKGGNL EAEF   QMR+  L C 
Sbjct: 214 CSKRELVGWGTKWFRMMLYCGVKPNQATIGMLMSLYQKGGNLEEAEFTLGQMRTHGLHCC 273

Query: 357 SAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLML 178
            AYSAM+TI+TRLGLY+K+EEI+  M+ED+V  NLENWLVQ+N YSQQGKLEEA  +L+ 
Sbjct: 274 VAYSAMMTIYTRLGLYEKSEEILKTMREDRVPPNLENWLVQLNVYSQQGKLEEAELVLLS 333

Query: 177 MNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
           M  +GI PNI+AYNTLITGYGK+   +A++  F++L N G EPDETTYRSM+EG+GRAD
Sbjct: 334 MKRSGISPNIIAYNTLITGYGKMGKTEASRRVFRDLCNNGFEPDETTYRSMIEGYGRAD 392



 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 35/197 (17%)
 Frame = -3

Query: 507  TKWFHLMLENGVQPNIATFGMLMSLYQKGG---------------NLVEA---------- 403
            ++ F  M   G   N  +F +L+ +Y K G                +V+A          
Sbjct: 678  SRLFRKMTAAGFAANTNSFNVLIDVYTKAGLFKRARKVLWMARRRKMVDAISYNTIITAY 737

Query: 402  --EFAFHQMRSFKLQCQ--------SAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNL 253
              +  F +M+S   Q Q        +AY+AM+  + + G  DK  E++  MKE    L+ 
Sbjct: 738  GKDKQFRRMKSASKQMQYAGFPVSLAAYNAMLDAYGKGGEIDKFREVLEQMKEANCALDH 797

Query: 252  ENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKN 73
              + + IN Y ++G +E+   +L  + +  + P++ +YN LI  YG    ++ A    K 
Sbjct: 798  YTYNIMINIYGKKGWIEDVVAVLGELKKHELEPDLWSYNALIEAYGIARMVEEAVYLVKE 857

Query: 72   LQNIGLEPDETTYRSMV 22
            +++ G+EPD+ TY +++
Sbjct: 858  MRDNGIEPDQVTYVNVI 874


>ref|XP_003576535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Brachypodium distachyon]
          Length = 936

 Score =  239 bits (611), Expect = 2e-61
 Identities = 114/179 (63%), Positives = 144/179 (80%)
 Frame = -3

Query: 537 CSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQ 358
           C+KR L   GTKWF++ML+  VQPN++T GMLM LYQK GNL EAEF F +MR   ++C 
Sbjct: 245 CAKRRLVDWGTKWFNMMLDREVQPNVSTVGMLMGLYQKTGNLSEAEFTFAKMRECNVKCI 304

Query: 357 SAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLML 178
           +AYSAMIT++TR GL+DK+EE++  M +DKVI NLENWLVQ+NAYSQQGK+EEA+ +L  
Sbjct: 305 NAYSAMITLYTRSGLFDKSEEVIVLMNDDKVIANLENWLVQLNAYSQQGKMEEAKLILQS 364

Query: 177 MNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRAD 1
           M + G+ PN+VA+NTLITGYGKVSDM  A+  F +L+  GL PDETTYRSM+EG+GRAD
Sbjct: 365 MVDEGVSPNVVAFNTLITGYGKVSDMQKAKEVFNSLEKAGLAPDETTYRSMIEGFGRAD 423



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 40/168 (23%), Positives = 79/168 (47%)
 Frame = -3

Query: 507  TKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIF 328
            T+ F  M++ G   +  T  +L+ +Y K G    A+  F+  R        +Y+ +I  +
Sbjct: 709  TRIFDEMIQLGHMASTITLNVLLDIYGKAGLFNRAQKVFNMARKQGQADIISYNTIIAAY 768

Query: 327  TRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNI 148
               G +      +  M++    ++LE +   +NAY + G+LEE   +L  M  A    + 
Sbjct: 769  AHSGDFRSMTYFVQKMQDAGFPVSLEAYNCMLNAYGKAGQLEEFAAVLQKMRRAKCDFDH 828

Query: 147  VAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
              YN ++  YG+   ++        L++ G+EPD  +Y ++++ +G A
Sbjct: 829  YTYNIMLNIYGRKGWIEGVAYVLSELKSRGVEPDLYSYNTLIKAYGIA 876



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/171 (21%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
 Frame = -3

Query: 531  KRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQ-S 355
            K GL     K F++  + G Q +I ++  +++ Y   G+     +   +M+         
Sbjct: 736  KAGLFNRAQKVFNMARKQG-QADIISYNTIIAAYAHSGDFRSMTYFVQKMQDAGFPVSLE 794

Query: 354  AYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLM 175
            AY+ M+  + + G  ++   ++  M+  K   +   + + +N Y ++G +E    +L  +
Sbjct: 795  AYNCMLNAYGKAGQLEEFAAVLQKMRRAKCDFDHYTYNIMLNIYGRKGWIEGVAYVLSEL 854

Query: 174  NEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMV 22
               G+ P++ +YNTLI  YG     + A    + ++  G+  D  TY +++
Sbjct: 855  KSRGVEPDLYSYNTLIKAYGIAGMPEDAVKLMQEMRLKGINADRITYTNLI 905


>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
           chloroplastic-like [Cucumis sativus]
          Length = 894

 Score =  237 bits (605), Expect = 1e-60
 Identities = 113/179 (63%), Positives = 140/179 (78%)
 Frame = -3

Query: 540 ACSKRGLGALGTKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQC 361
           AC K      GTKWF +MLE  VQPN+ATFGMLM LYQK  ++ E+EFAF+QMR+F + C
Sbjct: 209 ACYKSRFVEQGTKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVC 268

Query: 360 QSAYSAMITIFTRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLM 181
           ++AY++MITI+ R+ LYDKAEE++  M+EDKVI NLENW+V +NAY QQGK+EEA  +  
Sbjct: 269 ETAYASMITIYIRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFA 328

Query: 180 LMNEAGIRPNIVAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
            M EAG   NI+AYNTLITGYGK S+MD AQ  F  ++N G+EPDETTYRSM+EGWGRA
Sbjct: 329 SMEEAGFSSNIIAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRA 387



 Score = 65.5 bits (158), Expect = 8e-09
 Identities = 41/168 (24%), Positives = 80/168 (47%)
 Frame = -3

Query: 507  TKWFHLMLENGVQPNIATFGMLMSLYQKGGNLVEAEFAFHQMRSFKLQCQSAYSAMITIF 328
            ++ F  ML+ G  PN  T  +++ +Y K     +A   F   +   L    +Y+ MI+++
Sbjct: 674  SRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVY 733

Query: 327  TRLGLYDKAEEIMGFMKEDKVILNLENWLVQINAYSQQGKLEEARRLLMLMNEAGIRPNI 148
             +   +      +  MK +   ++LE +   ++AY ++ ++E  R +L  M E     + 
Sbjct: 734  GKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDH 793

Query: 147  VAYNTLITGYGKVSDMDAAQCFFKNLQNIGLEPDETTYRSMVEGWGRA 4
              YN +I  YG+   +D        L+  GLEPD  +Y ++++ +G A
Sbjct: 794  YTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIA 841