BLASTX nr result

ID: Akebia25_contig00032970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00032970
         (301 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A...    69   9e-10
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A...    66   4e-09
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A...    62   1e-07
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A...    60   4e-07
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A...    59   5e-07
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A...    59   5e-07
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A...    59   9e-07
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A...    59   9e-07
emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]    59   9e-07
ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249...    57   3e-06
emb|CAN66833.1| hypothetical protein VITISV_030891 [Vitis vinifera]    57   3e-06
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588...    56   5e-06
emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulga...    56   5e-06
emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]    56   6e-06
emb|CAN75589.1| hypothetical protein VITISV_042880 [Vitis vinifera]    55   8e-06

>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 517

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 27/79 (34%), Positives = 45/79 (56%)
 Frame = +1

Query: 1   FLGLFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTR 180
           FL +  ++W  P + S++++ W     +  ++  W ++PS I W VWKERNNR F+N++ 
Sbjct: 423 FLSISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWWSVWKERNNRCFDNRSN 482

Query: 181 SAHGSFLEILGLMYFWSKQ 237
           S H      +  + FW KQ
Sbjct: 483 SIHKVKWNCIVSLLFWCKQ 501


>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X2 [Solanum tuberosum]
          Length = 284

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 26/79 (32%), Positives = 45/79 (56%)
 Frame = +1

Query: 1   FLGLFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTR 180
           FL +  ++W  P + S++++ W     +  ++  W ++PS I W VWKERN+R F+N++ 
Sbjct: 190 FLSISNLNWTMPERTSNVLKSWVRRGGTKSQKRWWRLIPSCIWWSVWKERNSRCFDNRSN 249

Query: 181 SAHGSFLEILGLMYFWSKQ 237
           S H      +  + FW KQ
Sbjct: 250 SIHKVKWNCIVSLLFWCKQ 268


>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
           X1 [Solanum tuberosum]
          Length = 284

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 25/79 (31%), Positives = 44/79 (55%)
 Frame = +1

Query: 1   FLGLFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTR 180
           FL +  ++W  P + S++++ W     +  ++  W ++PS I W VWKERN+R F+N++ 
Sbjct: 190 FLNISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWWSVWKERNSRCFDNRSN 249

Query: 181 SAHGSFLEILGLMYFWSKQ 237
           S H      +  + F  KQ
Sbjct: 250 SIHKVKWNCIVSLLFLCKQ 268


>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 217

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/79 (34%), Positives = 38/79 (48%)
 Frame = +1

Query: 1   FLGLFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTR 180
           F+   +I W  P     +++ W  +  + K    W I+P+ I W +WKERN R F  K  
Sbjct: 123 FIQKRKIKWTKPGSIIEVLQCWNRDGNAGKNEKRWRIVPACIWWTIWKERNQRCFEGKQN 182

Query: 181 SAHGSFLEILGLMYFWSKQ 237
           +        LGL YFW KQ
Sbjct: 183 NIQKIKTNCLGLYYFWCKQ 201


>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 399

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/79 (34%), Positives = 39/79 (49%)
 Frame = +1

Query: 1   FLGLFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTR 180
           FL L  I W  P + +  ++ W      +K R  W I+P++I W  WKERN+R F +   
Sbjct: 305 FLSLKGISWAMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWATWKERNSRCFESVEN 364

Query: 181 SAHGSFLEILGLMYFWSKQ 237
           S     L  + L+ FW  Q
Sbjct: 365 SMQKVKLNCILLLCFWCNQ 383


>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 323

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/79 (34%), Positives = 39/79 (49%)
 Frame = +1

Query: 1   FLGLFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTR 180
           FL L  I W  P + +  ++ W      +K R  W I+P++I W  WKERN+R F +   
Sbjct: 229 FLSLKGISWAMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWATWKERNSRCFESVEN 288

Query: 181 SAHGSFLEILGLMYFWSKQ 237
           S     L  + L+ FW  Q
Sbjct: 289 SMQKVKLNCILLLCFWCNQ 307


>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 450

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/79 (34%), Positives = 38/79 (48%)
 Frame = +1

Query: 1   FLGLFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTR 180
           FL L  I W  P + +  +  W      +K R  W I+P++I W +WKERN+R F     
Sbjct: 356 FLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIEN 415

Query: 181 SAHGSFLEILGLMYFWSKQ 237
           S     L  + L+ FW  Q
Sbjct: 416 SVQDVKLNCILLLCFWCNQ 434


>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 556

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/79 (34%), Positives = 38/79 (48%)
 Frame = +1

Query: 1   FLGLFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTR 180
           FL L  I W  P + +  +  W      +K R  W I+P++I W +WKERN+R F     
Sbjct: 462 FLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIEN 521

Query: 181 SAHGSFLEILGLMYFWSKQ 237
           S     L  + L+ FW  Q
Sbjct: 522 SVQDVKLNCILLLCFWCNQ 540


>emb|CAN68112.1| hypothetical protein VITISV_040983 [Vitis vinifera]
          Length = 939

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/75 (34%), Positives = 37/75 (49%)
 Frame = +1

Query: 10   LFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTRSAH 189
            LF + WV P      + GW+      K+R +W   PS I W VWKERN   F+N+  S +
Sbjct: 845  LFGVSWVLPYSVRDTLSGWSGFNMGKKRRKVWKAAPSCIFWAVWKERNRIAFDNEELSLN 904

Query: 190  GSFLEILGLMYFWSK 234
                  +  ++ WSK
Sbjct: 905  XLKNSFVCNLWVWSK 919


>ref|XP_002271965.2| PREDICTED: uncharacterized protein LOC100249130 [Vitis vinifera]
          Length = 2143

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
 Frame = +1

Query: 10   LFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTRSAH 189
            LF + WV P      + GW+      K+R +W   PS I W VWKERN   F+N+  S +
Sbjct: 1866 LFGVSWVLPYSVRDTLSGWSGFNMGKKRRKVWKAAPSCIFWAVWKERNRIAFDNEELSMN 1925

Query: 190  ------GSFLEIL 210
                  G+ LE+L
Sbjct: 1926 SIIQKAGAALEVL 1938


>emb|CAN66833.1| hypothetical protein VITISV_030891 [Vitis vinifera]
          Length = 1767

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
 Frame = +1

Query: 10   LFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTRSAH 189
            LF + WV P      + GW+      K+R +W   PS I W VWKERN   F+N+  S +
Sbjct: 1636 LFGVSWVLPYSVRDTLSGWSGFNMGKKRRKVWKAAPSCIFWAVWKERNRIAFDNEELSMN 1695

Query: 190  ------GSFLEIL 210
                  G+ LE+L
Sbjct: 1696 SIIQKAGAALEVL 1708


>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
          Length = 255

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
 Frame = +1

Query: 1   FLGLFRIHWVFPCKFSSLVEGWASNAFSSK-KRFLWAILPSAIAWGVWKERNNRVFNNKT 177
           FL +  ++WV P     L+  W       + K   W  +P+ I W +WKERN R  + K 
Sbjct: 160 FLCILGVNWVMPKTTLELLRQWEGVGRRRRSKEDWWKCIPACIWWTLWKERNERSHDGKL 219

Query: 178 RSAHGSFLEILGLMYFWSKQKLEFKGTTFDDF 273
            S     +  L L+YFW KQ L  +  +  DF
Sbjct: 220 NSTQKIKMNSLSLLYFWCKQDLVGEVDSLVDF 251


>emb|CCA65974.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1379

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 25/61 (40%), Positives = 34/61 (55%)
 Frame = +1

Query: 1    FLGLFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTR 180
            +L L+ I WVFP       + W S   S   + +WA +   + W VWKERN+R+FNNK  
Sbjct: 1117 WLDLWSIKWVFPMSLRMAFDQWQSTNKSPFFKKIWASIFFIVVWSVWKERNDRIFNNKNT 1176

Query: 181  S 183
            S
Sbjct: 1177 S 1177


>emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
 Frame = +1

Query: 10   LFRIHWVFPCKFSSLVEGWASNAFSSKKR--FLWAILPSAIAWGVWKERNNRVFNNKTRS 183
            L +  WV P   S ++     N F S KR   LW     AI W VW+ERN R+F +KTR+
Sbjct: 4026 LXKTDWVPPRSISDMLS-INFNGFGSSKRGVVLWQDACIAIMWVVWRERNARIFEDKTRN 4084

Query: 184  AHGSFLEILGLMYFWSKQKLEFKGTTFDDFVFRWNSLCN 300
            +   +  I  L+  W+     FKG   +     W ++CN
Sbjct: 4085 SXNFWDSIRFLVSLWAFCSKVFKGIPLNVLQLDWLAVCN 4123


>emb|CAN75589.1| hypothetical protein VITISV_042880 [Vitis vinifera]
          Length = 816

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/89 (30%), Positives = 43/89 (48%)
 Frame = +1

Query: 10  LFRIHWVFPCKFSSLVEGWASNAFSSKKRFLWAILPSAIAWGVWKERNNRVFNNKTRSAH 189
           LF ++WV P      + GW+++    K+   W   P  + W VWKERN  VF N+  S  
Sbjct: 591 LFGVNWVLPLTVRDTLLGWSTSFVDKKRGKTWRAAPLCLFWTVWKERNRIVFYNEALSIQ 650

Query: 190 GSFLEILGLMYFWSKQKLEFKGTTFDDFV 276
                 +  ++ WSK  L+ +  +  +FV
Sbjct: 651 RLKNSFICNLFSWSKSCLDGEPRSLINFV 679


Top