BLASTX nr result

ID: Akebia25_contig00031177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00031177
         (439 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]               63   5e-08
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...    63   5e-08
emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]    62   8e-08

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/137 (29%), Positives = 61/137 (44%)
 Frame = -3

Query: 434  EQVDTTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNIKESQKLPSSQAELSDVW 255
            ++ D TGWNKNDGK Q               +++   S  W+ K +Q+  ++Q+    + 
Sbjct: 1478 DEADKTGWNKNDGKPQ---------------MDKLRESYDWDCKVAQE-KTTQSTYGGI- 1520

Query: 254  GKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEFRVRSHAWDTNVTREQVKKPT 75
                  + TT             DW +NE Q +  Q  E  V  H+WD N+  + + + T
Sbjct: 1521 ------SSTT------------GDWKKNELQMEVVQHDESPVNEHSWDANLPEDPLAQAT 1562

Query: 74   GSLAWDSSNAGDWKLRK 24
             S+ WDSS   DW  RK
Sbjct: 1563 TSVGWDSSTGKDWTKRK 1579


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/137 (29%), Positives = 61/137 (44%)
 Frame = -3

Query: 434  EQVDTTGWNKNDGKVQLGQWRESHVSHSTKPLEESPSSRGWNIKESQKLPSSQAELSDVW 255
            ++ D TGWNKNDGK Q               +++   S  W+ K +Q+  ++Q+    + 
Sbjct: 1418 DEADKTGWNKNDGKPQ---------------MDKLRESYDWDCKVAQE-KTTQSTYGGI- 1460

Query: 254  GKRAEEADTTDWNKQKQLQIQPNDWSENEGQNQWDQQKEFRVRSHAWDTNVTREQVKKPT 75
                  + TT             DW +NE Q +  Q  E  V  H+WD N+  + + + T
Sbjct: 1461 ------SSTT------------GDWKKNELQMEVVQHDESPVNEHSWDANLPEDPLAQAT 1502

Query: 74   GSLAWDSSNAGDWKLRK 24
             S+ WDSS   DW  RK
Sbjct: 1503 TSVGWDSSTGKDWTKRK 1519


>emb|CAN63470.1| hypothetical protein VITISV_024603 [Vitis vinifera]
          Length = 1081

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 46/170 (27%), Positives = 63/170 (37%), Gaps = 33/170 (19%)
 Frame = -3

Query: 434  EQVDTTGWNKND----GKVQLGQWRESHVSHSTKPLEESPSSRGWNIKESQKLPSSQAEL 267
            E   + GW+        K Q   +R +H        E+SP S G +       P      
Sbjct: 553  ESSRSAGWDDKGTWGTDKAQNTAFRRTH--------EDSPRSSGRDETFRDGRPQFA--- 601

Query: 266  SDVWGKRAEEADTTDWNKQKQ-----------------------------LQIQPNDWSE 174
            S  WGK+ +EAD T WNK                                +     DW +
Sbjct: 602  SSAWGKKIDEADKTGWNKNDGKPQMDKLRESCDWDCKVAQEKTTQSTYGGISSTTGDWKK 661

Query: 173  NEGQNQWDQQKEFRVRSHAWDTNVTREQVKKPTGSLAWDSSNAGDWKLRK 24
            NE Q +  Q  E  V  H+WD N+  + + + T S+ WDSS   DW  RK
Sbjct: 662  NELQMEVVQHDESPVNEHSWDANLPEDPLAQATTSVGWDSSTGKDWTKRK 711


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