BLASTX nr result
ID: Akebia25_contig00030987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00030987
(1191 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi... 502 e-139
gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis] 466 e-128
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi... 463 e-128
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi... 463 e-128
ref|XP_002528030.1| pentatricopeptide repeat-containing protein,... 463 e-128
ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containi... 462 e-127
ref|XP_007032385.1| Pentatricopeptide repeat (PPR-like) superfam... 459 e-127
ref|XP_002325518.2| pentatricopeptide repeat-containing family p... 447 e-123
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi... 446 e-123
ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containi... 440 e-121
ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containi... 439 e-120
ref|XP_002888838.1| pentatricopeptide repeat-containing protein ... 438 e-120
ref|XP_007139658.1| hypothetical protein PHAVU_008G048400g [Phas... 437 e-120
ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containi... 435 e-119
ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutr... 431 e-118
ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Caps... 430 e-118
ref|NP_177302.1| pentatricopeptide repeat-containing protein [Ar... 426 e-117
ref|XP_003604235.1| Pentatricopeptide repeat-containing protein ... 426 e-116
ref|XP_007220563.1| hypothetical protein PRUPE_ppa003304mg [Prun... 388 e-105
ref|XP_007019860.1| Pentatricopeptide repeat (PPR-like) superfam... 365 2e-98
>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Vitis vinifera]
Length = 725
Score = 502 bits (1293), Expect = e-139
Identities = 246/322 (76%), Positives = 282/322 (87%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
FSE+DAFP SLPLH+KNPH+ + DIQRFARQ KLKEALTILDY D+QGIPVNPTTFSSLL
Sbjct: 99 FSEKDAFPMSLPLHTKNPHAIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLL 158
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
+ V SKSLTHG+QIH HIRINGL+NN+FLRTKLVHMYTSCGS+EDA VFDG+S S
Sbjct: 159 RACVESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTSCGSLEDARGVFDGVS--SKS 216
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VY WNALLRGNV+ G R YRE L TYS+MRELG+ELNVY+FS +IKSFAG++A QG+KA
Sbjct: 217 VYTWNALLRGNVISGRRHYREALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKA 276
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+LIKNG D SI+ +TSLIDMYFKC KIKLAR +FEEI++RDVVVWGAMI+GFGHNRL
Sbjct: 277 HALLIKNGLVDSSIL-RTSLIDMYFKCGKIKLARLMFEEIVERDVVVWGAMIAGFGHNRL 335
Query: 250 QKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQS 71
Q+EAL+ RWMR EGI PNSVI+T ILPVIGE+ AWKLG+EVH YV+KTK+Y KQ+FIQS
Sbjct: 336 QREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQS 395
Query: 70 SLIDMYSKCGDMASGRRVFYES 5
+LIDMY KCGDMASGR+VFY S
Sbjct: 396 ALIDMYCKCGDMASGRQVFYAS 417
Score = 157 bits (396), Expect = 1e-35
Identities = 95/285 (33%), Positives = 149/285 (52%)
Frame = -3
Query: 868 KEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKL 689
+EAL+ + + G+ +N +FS ++ S + + G + HA + NGL ++ LRT L
Sbjct: 236 REALSTYSEMRELGVELNVYSFSCMIKSFAGATAFRQGLKAHALLIKNGLVDSSILRTSL 295
Query: 688 VHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGI 509
+ MY CG I+ A +F+ I VE V W A++ G R RE L MR GI
Sbjct: 296 IDMYFKCGKIKLARLMFEEI--VERDVVVWGAMIAG--FGHNRLQREALEYLRWMRREGI 351
Query: 508 ELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLAR 329
N ++++ A G + HA ++K + IQ++LIDMY KC + R
Sbjct: 352 CPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKSYSKQVFIQSALIDMYCKCGDMASGR 411
Query: 328 QVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMW 149
QVF +R+ V W A++SG+ N +AL WM+ EG P+ V + +LPV E+
Sbjct: 412 QVFYASTERNAVSWTALMSGYVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELR 471
Query: 148 AWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
A + GKE+H Y +K + + I +SL+ MYSKCG++ ++F
Sbjct: 472 ALRQGKEIHSYAVK-NGFLPNVSIATSLMVMYSKCGNLDYSFKLF 515
Score = 144 bits (362), Expect = 1e-31
Identities = 89/296 (30%), Positives = 155/296 (52%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RING 722
I F +EAL L ++ ++GI N +++L + + GR++HA++ +
Sbjct: 327 IAGFGHNRLQREALEYLRWMRREGICPNSVIMTTILPVIGEVGAWKLGREVHAYVVKTKS 386
Query: 721 LDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
F+++ L+ MY CG + +VF + E + W AL+ G V G R + L
Sbjct: 387 YSKQVFIQSALIDMYCKCGDMASGRQVF--YASTERNAVSWTALMSGYVSNG--RLDQAL 442
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ + M++ G +V T ++++ A AL QG + H+ +KNGF ++ I TSL+ M
Sbjct: 443 RSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLP-NVSIATSLMVM 501
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC + + ++F+ + R+V+ W AMI + N EA+ FR M+ P+SV +
Sbjct: 502 YSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENGCLHEAVGVFRSMQLSKHRPDSVAM 561
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
IL + GE+ KLGKE+HG ++K K++ F+ + +I MY K G ++ + F
Sbjct: 562 ARILSICGELRVLKLGKEIHGQILK-KDFESIPFVSAEIIKMYGKFGAISKAKLAF 616
Score = 92.0 bits (227), Expect = 4e-16
Identities = 59/242 (24%), Positives = 116/242 (47%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+ +L +AL + ++ ++G + T +++L ++L G++IH++ NG N
Sbjct: 432 YVSNGRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPN 491
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
+ T L+ MY+ CG+++ + K+FDG M +V W A++ V G E + +
Sbjct: 492 VSIATSLMVMYSKCGNLDYSFKLFDG--MDARNVISWTAMIDSYVENGC--LHEAVGVFR 547
Query: 529 KMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKC 350
M+ + + ++ L G + H ++K F + + +I MY K
Sbjct: 548 SMQLSKHRPDSVAMARILSICGELRVLKLGKEIHGQILKKDF-ESIPFVSAEIIKMYGKF 606
Query: 349 CKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAIL 170
I A+ F+ I + + W A+I +G+N L ++A++ F M+S+G PN A+L
Sbjct: 607 GAISKAKLAFKAIPAKGSMAWTAIIEAYGYNDLYQDAINLFHQMQSDGFIPNHYTFKAVL 666
Query: 169 PV 164
+
Sbjct: 667 SI 668
>gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis]
Length = 647
Score = 466 bits (1198), Expect = e-128
Identities = 230/323 (71%), Positives = 270/323 (83%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F+++DAFP SLPLHSKNP + Y DIQRFARQ+KL +ALTILDY+D+QGIPVNPTTF++L+
Sbjct: 21 FTKKDAFPESLPLHSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIPVNPTTFAALI 80
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ VR+KSL HG+Q+HA IRINGLD N+FLRTKLVHMYTSCGS++DA +FD S
Sbjct: 81 AACVRTKSLDHGKQVHAFIRINGLDKNEFLRTKLVHMYTSCGSVDDANNLFD--ESPSRS 138
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VYPWNALLRGNV+ GGRRYR+ L TY +MR LGIE+NVY+FSS+IKS AG+SAL QG+K
Sbjct: 139 VYPWNALLRGNVISGGRRYRDALSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLKT 198
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+LIKNG GS +++TSLIDMYFKC KIKLARQVFEEI++RD+V WGAMISGF HNRL
Sbjct: 199 HALLIKNGLV-GSAMLRTSLIDMYFKCGKIKLARQVFEEIVERDIVAWGAMISGFAHNRL 257
Query: 250 QKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQS 71
Q +ALD R M EGI+ NSVILT ILPVIGE+ A KLG+EVH Y +KTK Y KQ FIQS
Sbjct: 258 QWQALDYTRRMVDEGIKLNSVILTIILPVIGELLARKLGREVHAYAVKTKRYAKQTFIQS 317
Query: 70 SLIDMYSKCGDMASGRRVFYESK 2
LIDMY KCGDM +GRRVFY K
Sbjct: 318 GLIDMYCKCGDMENGRRVFYRLK 340
Score = 155 bits (393), Expect = 2e-35
Identities = 96/287 (33%), Positives = 153/287 (53%)
Frame = -3
Query: 874 KLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRT 695
+ ++AL+ + GI +N +FSS++ S+ + +L G + HA + NGL + LRT
Sbjct: 156 RYRDALSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLKTHALLIKNGLVGSAMLRT 215
Query: 694 KLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMREL 515
L+ MY CG I+ A +VF+ I VE + W A++ G R + L +M +
Sbjct: 216 SLIDMYFKCGKIKLARQVFEEI--VERDIVAWGAMISG--FAHNRLQWQALDYTRRMVDE 271
Query: 514 GIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKL 335
GI+LN + ++ A G + HA +K IQ+ LIDMY KC ++
Sbjct: 272 GIKLNSVILTIILPVIGELLARKLGREVHAYAVKTKRYAKQTFIQSGLIDMYCKCGDMEN 331
Query: 334 ARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGE 155
R+VF + +R+ + W A+ISG+ N ++AL WM+ EGI P+ V + ++P+ E
Sbjct: 332 GRRVFYRLKERNAICWTALISGYVANGRLEQALRSIIWMQQEGIRPDVVTVATVVPICAE 391
Query: 154 MWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+ A K GKE+H Y +K + + I SSL+ MYSKCG + R+F
Sbjct: 392 LRALKPGKEIHAYAVK-NCFLPNVSIVSSLMMMYSKCGVLDYSVRLF 437
Score = 135 bits (340), Expect = 3e-29
Identities = 88/296 (29%), Positives = 152/296 (51%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAH-IRING 722
I FA +AL + +GI +N + +L + + GR++HA+ ++
Sbjct: 249 ISGFAHNRLQWQALDYTRRMVDEGIKLNSVILTIILPVIGELLARKLGREVHAYAVKTKR 308
Query: 721 LDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
F+++ L+ MY CG +E+ +VF + E + W AL+ G V G R + L
Sbjct: 309 YAKQTFIQSGLIDMYCKCGDMENGRRVF--YRLKERNAICWTALISGYVANG--RLEQAL 364
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ M++ GI +V T ++++ A AL G + HA +KN F ++ I +SL+ M
Sbjct: 365 RSIIWMQQEGIRPDVVTVATVVPICAELRALKPGKEIHAYAVKNCFLP-NVSIVSSLMMM 423
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC + + ++FE + R+V++W AMI + NR EAL R M P+SV +
Sbjct: 424 YSKCGVLDYSVRLFEGMEQRNVILWTAMIDSYVENRHLDEALSVIRSMVLSKHRPDSVAI 483
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+L + E+ + K GKE+HG V+K +N+ F+ + ++ MY +CG + + VF
Sbjct: 484 GRMLCICNELKSLKFGKEIHGQVLK-RNFESVHFVSAEIVKMYGRCGVIDDAKLVF 538
Score = 82.4 bits (202), Expect = 3e-13
Identities = 63/293 (21%), Positives = 132/293 (45%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGL 719
I + +L++AL + ++ ++GI + T ++++ ++L G++IHA+ N
Sbjct: 351 ISGYVANGRLEQALRSIIWMQQEGIRPDVVTVATVVPICAELRALKPGKEIHAYAVKNCF 410
Query: 718 DNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLF 539
N + + L+ MY+ CG ++ + ++F+G M + +V W A++ V R E L
Sbjct: 411 LPNVSIVSSLMMMYSKCGVLDYSVRLFEG--MEQRNVILWTAMIDSYVEN--RHLDEALS 466
Query: 538 TYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMY 359
M + ++ +L G + H ++K F + + ++ MY
Sbjct: 467 VIRSMVLSKHRPDSVAIGRMLCICNELKSLKFGKEIHGQVLKRNF-ESVHFVSAEIVKMY 525
Query: 358 FKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILT 179
+C I A+ VF+ I + + W A+I + N L ++A+D F MR +G PN+
Sbjct: 526 GRCGVIDDAKLVFDTIRVKGSMTWTAIIEAYRDNGLYEDAIDLFYEMRDKGFTPNNFTFQ 585
Query: 178 AILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRR 20
L + E + + ++ N + S +I + ++ G + + +R
Sbjct: 586 VALSICNEAGFVDDACRIFNLMTRSYNVKASEEQYSLIIGLLTRFGRVEAAQR 638
>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 716
Score = 463 bits (1192), Expect = e-128
Identities = 222/322 (68%), Positives = 278/322 (86%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F+E+DAFP SLPLH+KNPH+ Y+D+QRFARQ+KLKEALTI+DY+D+QGIPVN TTFSSL+
Sbjct: 62 FAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLI 121
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
+ VR+KS+T+ +QIHAHIRINGL+NN+F+RT+LVHMYT+CGS+E+A+K+FD S S
Sbjct: 122 TACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESS--SKS 179
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VYPWNALLRG V+ G R YR +L TY++MR LG+ELNVY+F+++IKSFAG+SA TQG+KA
Sbjct: 180 VYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKA 239
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
H +LIKNG GS ++ T+L+DMYFKC KIKLARQ+F EI +RDVVVWG++I+GF HNRL
Sbjct: 240 HGLLIKNGLI-GSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRL 298
Query: 250 QKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQS 71
Q+EAL+ R M +GI PNSVILT ILPVIGE+WA +LG+EVH YVIKTK+Y KQ+FIQS
Sbjct: 299 QREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQS 358
Query: 70 SLIDMYSKCGDMASGRRVFYES 5
+LIDMY KCGD+ SGR VFY S
Sbjct: 359 ALIDMYCKCGDIGSGRAVFYAS 380
Score = 144 bits (363), Expect = 7e-32
Identities = 90/272 (33%), Positives = 142/272 (52%)
Frame = -3
Query: 829 GIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDA 650
G+ +N +F++++ S + + T G + H + NGL + L T LV MY CG I+ A
Sbjct: 212 GVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLA 271
Query: 649 EKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKS 470
++F I+ E V W +++ G R RE L +M + GI N ++++
Sbjct: 272 RQMFGEIT--ERDVVVWGSIIAG--FAHNRLQREALEYTRRMIDDGIRPNSVILTTILPV 327
Query: 469 FAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVV 290
A G + HA +IK I IQ++LIDMY KC I R VF ++R+ +
Sbjct: 328 IGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAIC 387
Query: 289 WGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVI 110
W A++SG+ N ++A+ WM+ EG P+ V + ILPV ++ A + GKE+H Y +
Sbjct: 388 WTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAM 447
Query: 109 KTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
K + + I SSL+ MYSKCG M ++F
Sbjct: 448 K-NCFLPNVSIVSSLMVMYSKCGVMDYTLKLF 478
Score = 131 bits (330), Expect = 5e-28
Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAH-IRING 722
I FA +EAL + GI N +++L + + G+++HA+ I+
Sbjct: 290 IAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKS 349
Query: 721 LDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
F+++ L+ MY CG I VF + +E + W AL+ G + G R + +
Sbjct: 350 YSKQIFIQSALIDMYCKCGDIGSGRAVF--YASMERNAICWTALMSGYALNG--RLEQAV 405
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ M++ G ++ T ++++ A AL G + HA +KN F ++ I +SL+ M
Sbjct: 406 RSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLP-NVSIVSSLMVM 464
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC + ++F + R+V++W AMI + N+ EA+D FR M+ P++V +
Sbjct: 465 YSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTM 524
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+ IL + E K+GKE+HG V+K K + F+ + L+ +Y KCG + + VF
Sbjct: 525 SRILYICSEQKMLKMGKEIHGQVLKRK-FEPVHFVSAELVKLYGKCGAVKMAKMVF 579
Score = 93.2 bits (230), Expect = 2e-16
Identities = 61/245 (24%), Positives = 121/245 (49%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A +L++A+ + ++ ++G + T +++L + ++L G++IHA+ N N
Sbjct: 395 YALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPN 454
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
+ + L+ MY+ CG ++ K+F+G M + +V W A++ + + E + +
Sbjct: 455 VSIVSSLMVMYSKCGVMDYTLKLFNG--MEQRNVILWTAMIDSYIEN--QCPHEAIDIFR 510
Query: 529 KMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKC 350
M+ + T S ++ + L G + H ++K F + + L+ +Y KC
Sbjct: 511 AMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKF-EPVHFVSAELVKLYGKC 569
Query: 349 CKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAIL 170
+K+A+ VFE I + + W A+I +G + +EA+D F MRS GI PN +L
Sbjct: 570 GAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVL 629
Query: 169 PVIGE 155
+ E
Sbjct: 630 SICKE 634
>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cucumis sativus]
Length = 696
Score = 463 bits (1192), Expect = e-128
Identities = 222/322 (68%), Positives = 278/322 (86%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F+E+DAFP SLPLH+KNPH+ Y+D+QRFARQ+KLKEALTI+DY+D+QGIPVN TTFSSL+
Sbjct: 62 FAEKDAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLI 121
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
+ VR+KS+T+ +QIHAHIRINGL+NN+F+RT+LVHMYT+CGS+E+A+K+FD S S
Sbjct: 122 TACVRTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESS--SKS 179
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VYPWNALLRG V+ G R YR +L TY++MR LG+ELNVY+F+++IKSFAG+SA TQG+KA
Sbjct: 180 VYPWNALLRGTVMAGRRDYRSILSTYAEMRRLGVELNVYSFANIIKSFAGASAFTQGLKA 239
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
H +LIKNG GS ++ T+L+DMYFKC KIKLARQ+F EI +RDVVVWG++I+GF HNRL
Sbjct: 240 HGLLIKNGLI-GSSLLGTTLVDMYFKCGKIKLARQMFGEITERDVVVWGSIIAGFAHNRL 298
Query: 250 QKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQS 71
Q+EAL+ R M +GI PNSVILT ILPVIGE+WA +LG+EVH YVIKTK+Y KQ+FIQS
Sbjct: 299 QREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKSYSKQIFIQS 358
Query: 70 SLIDMYSKCGDMASGRRVFYES 5
+LIDMY KCGD+ SGR VFY S
Sbjct: 359 ALIDMYCKCGDIGSGRAVFYAS 380
Score = 144 bits (363), Expect = 7e-32
Identities = 90/272 (33%), Positives = 142/272 (52%)
Frame = -3
Query: 829 GIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDA 650
G+ +N +F++++ S + + T G + H + NGL + L T LV MY CG I+ A
Sbjct: 212 GVELNVYSFANIIKSFAGASAFTQGLKAHGLLIKNGLIGSSLLGTTLVDMYFKCGKIKLA 271
Query: 649 EKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKS 470
++F I+ E V W +++ G R RE L +M + GI N ++++
Sbjct: 272 RQMFGEIT--ERDVVVWGSIIAG--FAHNRLQREALEYTRRMIDDGIRPNSVILTTILPV 327
Query: 469 FAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVV 290
A G + HA +IK I IQ++LIDMY KC I R VF ++R+ +
Sbjct: 328 IGEIWARRLGQEVHAYVIKTKSYSKQIFIQSALIDMYCKCGDIGSGRAVFYASMERNAIC 387
Query: 289 WGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVI 110
W A++SG+ N ++A+ WM+ EG P+ V + ILPV ++ A + GKE+H Y +
Sbjct: 388 WTALMSGYALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAM 447
Query: 109 KTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
K + + I SSL+ MYSKCG M ++F
Sbjct: 448 K-NCFLPNVSIVSSLMVMYSKCGVMDYTLKLF 478
Score = 131 bits (330), Expect = 5e-28
Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAH-IRING 722
I FA +EAL + GI N +++L + + G+++HA+ I+
Sbjct: 290 IAGFAHNRLQREALEYTRRMIDDGIRPNSVILTTILPVIGEIWARRLGQEVHAYVIKTKS 349
Query: 721 LDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
F+++ L+ MY CG I VF + +E + W AL+ G + G R + +
Sbjct: 350 YSKQIFIQSALIDMYCKCGDIGSGRAVF--YASMERNAICWTALMSGYALNG--RLEQAV 405
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ M++ G ++ T ++++ A AL G + HA +KN F ++ I +SL+ M
Sbjct: 406 RSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLP-NVSIVSSLMVM 464
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC + ++F + R+V++W AMI + N+ EA+D FR M+ P++V +
Sbjct: 465 YSKCGVMDYTLKLFNGMEQRNVILWTAMIDSYIENQCPHEAIDIFRAMQLSKHRPDTVTM 524
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+ IL + E K+GKE+HG V+K K + F+ + L+ +Y KCG + + VF
Sbjct: 525 SRILYICSEQKMLKMGKEIHGQVLKRK-FEPVHFVSAELVKLYGKCGAVKMAKMVF 579
Score = 93.2 bits (230), Expect = 2e-16
Identities = 61/245 (24%), Positives = 121/245 (49%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A +L++A+ + ++ ++G + T +++L + ++L G++IHA+ N N
Sbjct: 395 YALNGRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPN 454
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
+ + L+ MY+ CG ++ K+F+G M + +V W A++ + + E + +
Sbjct: 455 VSIVSSLMVMYSKCGVMDYTLKLFNG--MEQRNVILWTAMIDSYIEN--QCPHEAIDIFR 510
Query: 529 KMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKC 350
M+ + T S ++ + L G + H ++K F + + L+ +Y KC
Sbjct: 511 AMQLSKHRPDTVTMSRILYICSEQKMLKMGKEIHGQVLKRKF-EPVHFVSAELVKLYGKC 569
Query: 349 CKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAIL 170
+K+A+ VFE I + + W A+I +G + +EA+D F MRS GI PN +L
Sbjct: 570 GAVKMAKMVFEAIPVKGPMTWTAIIEAYGESGEFQEAIDLFDRMRSRGISPNHFTFKVVL 629
Query: 169 PVIGE 155
+ E
Sbjct: 630 SICKE 634
>ref|XP_002528030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532560|gb|EEF34348.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 456
Score = 463 bits (1192), Expect = e-128
Identities = 228/325 (70%), Positives = 270/325 (83%), Gaps = 2/325 (0%)
Frame = -3
Query: 973 RFSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSL 794
RF E+DAFP SLPLH+KNP + YKDIQRF RQ+KLKEAL I+DYL++QGIPVN TTFS+L
Sbjct: 62 RFREKDAFPSSLPLHTKNPSAVYKDIQRFTRQNKLKEALIIMDYLEQQGIPVNATTFSAL 121
Query: 793 LASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVES 614
+A+ +RSKSL H +QIHAHIRINGL+NN+FLRTKLV +YTSCGS EDA+ VF G +
Sbjct: 122 IAACIRSKSLDHAKQIHAHIRINGLENNEFLRTKLVSLYTSCGSFEDAKMVF-GECTSST 180
Query: 613 SVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMK 434
SVYPWNALLRG V+ GG+RY +V+ Y +MRELG+ELNVY+FS++IKSF+G+SA QG+K
Sbjct: 181 SVYPWNALLRGTVISGGKRYNDVVSAYGQMRELGVELNVYSFSNVIKSFSGASAFKQGLK 240
Query: 433 AHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDR--DVVVWGAMISGFGH 260
HA+LIKNGF D S I++T LID YFKC KIKLA +VFEE+ DR D+VVWGAMI+GF H
Sbjct: 241 THALLIKNGFVDSS-ILRTCLIDFYFKCGKIKLAHRVFEEMPDRGIDIVVWGAMIAGFAH 299
Query: 259 NRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLF 80
NR Q+EALD RWM SEG+ PNSVI+T ILPVIGE WA KLG+EVHGYV+KTK Y QL
Sbjct: 300 NRYQREALDYLRWMVSEGLYPNSVIVTTILPVIGEAWARKLGQEVHGYVVKTKRYSNQLT 359
Query: 79 IQSSLIDMYSKCGDMASGRRVFYES 5
IQ+ LIDMY KCGDM SGRRVFY S
Sbjct: 360 IQTGLIDMYCKCGDMVSGRRVFYGS 384
Score = 102 bits (254), Expect = 3e-19
Identities = 61/212 (28%), Positives = 104/212 (49%)
Frame = -3
Query: 829 GIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDA 650
G+ +N +FS+++ S + + G + HA + NG ++ LRT L+ Y CG I+ A
Sbjct: 214 GVELNVYSFSNVIKSFSGASAFKQGLKTHALLIKNGFVDSSILRTCLIDFYFKCGKIKLA 273
Query: 649 EKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKS 470
+VF+ + + W A++ G R RE L M G+ N ++++
Sbjct: 274 HRVFEEMPDRGIDIVVWGAMIAG--FAHNRYQREALDYLRWMVSEGLYPNSVIVTTILPV 331
Query: 469 FAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVV 290
+ A G + H ++K + IQT LIDMY KC + R+VF ++R+ +
Sbjct: 332 IGEAWARKLGQEVHGYVVKTKRYSNQLTIQTGLIDMYCKCGDMVSGRRVFYGSMERNAIS 391
Query: 289 WGAMISGFGHNRLQKEALDCFRWMRSEGIEPN 194
W A++SG+ N ++AL WM+ EG P+
Sbjct: 392 WTALMSGYVSNGRPEQALRSVAWMQQEGFRPD 423
>ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Citrus sinensis]
Length = 681
Score = 462 bits (1188), Expect = e-127
Identities = 227/325 (69%), Positives = 271/325 (83%)
Frame = -3
Query: 976 QRFSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSS 797
++ +E+DAFP SLPLH KNP + YKDIQRFARQ+KLKEAL ILDY+D+QGIPVN TTF++
Sbjct: 53 KKSAEKDAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNA 112
Query: 796 LLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVE 617
L+ + VR++SL GR IH HIRINGL+NN FLRTKLV MYTSCGS EDAEKVFD S
Sbjct: 113 LITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESS--S 170
Query: 616 SSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGM 437
SVYPWNALLRG V+ G +RYR+VLF Y KMRELG++LNVYTFS +IKSFAG+SAL QG+
Sbjct: 171 ESVYPWNALLRGAVIAGKKRYRDVLFNYMKMRELGVQLNVYTFSCVIKSFAGASALMQGL 230
Query: 436 KAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHN 257
K HA+LIKNGF D SI+ +TSLIDMYFKC KIKLAR+VF+E DRD+VVWG+MI+GF HN
Sbjct: 231 KTHALLIKNGFVDYSIL-RTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHN 289
Query: 256 RLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFI 77
RL+ EALDC RWM EGI PNSV+LT +LPVIGE WA KLG+EVH YV+K + Y ++LF+
Sbjct: 290 RLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNERYSEELFV 349
Query: 76 QSSLIDMYSKCGDMASGRRVFYESK 2
+SSL+DMY KC DM S RVFYE++
Sbjct: 350 RSSLVDMYCKCRDMNSAWRVFYETE 374
Score = 142 bits (358), Expect = 3e-31
Identities = 86/274 (31%), Positives = 142/274 (51%)
Frame = -3
Query: 829 GIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDA 650
G+ +N TFS ++ S + +L G + HA + NG + LRT L+ MY CG I+ A
Sbjct: 205 GVQLNVYTFSCVIKSFAGASALMQGLKTHALLIKNGFVDYSILRTSLIDMYFKCGKIKLA 264
Query: 649 EKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKS 470
+VFD + + W +++ G R E L M GI N + L+
Sbjct: 265 RRVFDETD--DRDIVVWGSMIAG--FAHNRLRWEALDCARWMIREGIYPNSVVLTILLPV 320
Query: 469 FAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVV 290
+ A G + HA ++KN + +++SL+DMY KC + A +VF E +R+ ++
Sbjct: 321 IGEAWARKLGQEVHAYVLKNERYSEELFVRSSLVDMYCKCRDMNSAWRVFYETEERNEIL 380
Query: 289 WGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVI 110
W A++SG+ N ++AL WM+ EG P+ V + ++PV ++ A GKE+H Y +
Sbjct: 381 WTALMSGYVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAV 440
Query: 109 KTKNYRKQLFIQSSLIDMYSKCGDMASGRRVFYE 8
K + + + I +SL+ MYSKCG + ++F E
Sbjct: 441 KNQ-FLPNVSIITSLMIMYSKCGVLDYSLKLFDE 473
Score = 134 bits (337), Expect = 8e-29
Identities = 95/296 (32%), Positives = 152/296 (51%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGL 719
I FA EAL ++ ++GI N + LL + + + G+++HA++ N
Sbjct: 283 IAGFAHNRLRWEALDCARWMIREGIYPNSVVLTILLPVIGEAWARKLGQEVHAYVLKNER 342
Query: 718 DNND-FLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
+ + F+R+ LV MY C + A +VF E + W AL+ G V G R + L
Sbjct: 343 YSEELFVRSSLVDMYCKCRDMNSAWRVF--YETEERNEILWTALMSGYVSNG--RLEQAL 398
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ + M++ G +V T +++I + AL G + HA +KN F II TSL+ M
Sbjct: 399 RSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSII-TSLMIM 457
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC + + ++F+E+ R+V+ W AMI N +AL FR M+ P+SV +
Sbjct: 458 YSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENGRLDDALGVFRSMQLSKHRPDSVAM 517
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+L V G++ A KLGKE+HG V+K K++ F+ + I MY CG + + VF
Sbjct: 518 ARMLSVSGQLKALKLGKEIHGQVLK-KDFESVPFVAAENIKMYGMCGFLECAKLVF 572
Score = 92.4 bits (228), Expect = 3e-16
Identities = 60/245 (24%), Positives = 117/245 (47%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+ +L++AL + ++ ++G + T ++++ + K+L HG++IHA+ N N
Sbjct: 388 YVSNGRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPN 447
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
+ T L+ MY+ CG ++ + K+FD M +V W A++ + G R + L +
Sbjct: 448 VSIITSLMIMYSKCGVLDYSLKLFD--EMEVRNVISWTAMIDSCIENG--RLDDALGVFR 503
Query: 529 KMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKC 350
M+ + + ++ AL G + H ++K F + + I MY C
Sbjct: 504 SMQLSKHRPDSVAMARMLSVSGQLKALKLGKEIHGQVLKKDFESVPFVAAEN-IKMYGMC 562
Query: 349 CKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAIL 170
++ A+ VF+ + + + W A+I +G+N L +EAL F MR+ G PN +L
Sbjct: 563 GFLECAKLVFDAVPVKGSITWTAIIEAYGYNDLCQEALSLFNKMRNGGFTPNHFTFKVLL 622
Query: 169 PVIGE 155
+ +
Sbjct: 623 SICNQ 627
>ref|XP_007032385.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508711414|gb|EOY03311.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 683
Score = 459 bits (1182), Expect = e-127
Identities = 226/323 (69%), Positives = 269/323 (83%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F E++AFP SLPLH+KNPH+ YKDIQRFARQ+KLKEAL ILDY+D+QGIPVNPTTFSSLL
Sbjct: 57 FFEKNAFPSSLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFSSLL 116
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ VRSKSL GRQIH+HIR NGL+NN+FLR KL HMYTSCGSI+DA +VFD +
Sbjct: 117 AACVRSKSLADGRQIHSHIRTNGLENNEFLRAKLAHMYTSCGSIDDALRVFD--ECTSKN 174
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
V+ WNALLRG V+ G +RY +VL TYS+MR L ++LNVYTFS+++KSFAG+SA QG+K
Sbjct: 175 VHSWNALLRGTVISGKKRYLDVLSTYSEMRLLAVKLNVYTFSAVLKSFAGASAFRQGLKT 234
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+LIKNGF D S++ +T LID YFKC KIKLA +V EEI +RD+V+WGAMI+GF HNR+
Sbjct: 235 HALLIKNGFIDSSML-RTGLIDFYFKCGKIKLACRVLEEIPERDIVLWGAMIAGFAHNRM 293
Query: 250 QKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQS 71
QKEAL RWM S GI PNSVILT ILPVIGE+WA KLG+E+H YV+KTK+Y KQL IQS
Sbjct: 294 QKEALSYVRWMISAGIYPNSVILTTILPVIGEVWARKLGREIHAYVVKTKSYSKQLVIQS 353
Query: 70 SLIDMYSKCGDMASGRRVFYESK 2
L+DMY KCGDM SGRRVFY S+
Sbjct: 354 GLVDMYCKCGDMDSGRRVFYCSR 376
Score = 135 bits (341), Expect = 3e-29
Identities = 91/296 (30%), Positives = 154/296 (52%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RING 722
I FA KEAL+ + ++ GI N +++L + + GR+IHA++ +
Sbjct: 285 IAGFAHNRMQKEALSYVRWMISAGIYPNSVILTTILPVIGEVWARKLGREIHAYVVKTKS 344
Query: 721 LDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
+++ LV MY CG ++ +VF E + W AL+ G V G R + L
Sbjct: 345 YSKQLVIQSGLVDMYCKCGDMDSGRRVF--YCSRERNAISWTALMSGYVSNG--RLNQAL 400
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ M++ G + +V T ++++ A AL+ G + HA +KN F ++ I TSL+ M
Sbjct: 401 RSVVWMQQEGFKPDVVTVATILPVCAELRALSHGKEIHAYAVKNCFFP-NVSIVTSLMIM 459
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC + + ++F + R+V+ W AMI + + EAL FR M+ P+SV +
Sbjct: 460 YSKCGVLDYSLKLFNGMEARNVISWTAMIESYVKSGHLHEALSVFRSMQFSKHRPDSVAM 519
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+L V E+ A KLGKE+HG V+K K++ F+ + ++ MY CG +++ + VF
Sbjct: 520 ARMLNVCSELRAVKLGKEIHGQVLK-KDFESIPFVSAGIVKMYGSCGLISTAKLVF 574
Score = 135 bits (340), Expect = 3e-29
Identities = 92/307 (29%), Positives = 150/307 (48%), Gaps = 2/307 (0%)
Frame = -3
Query: 928 SKNPHSTYKDIQRFARQDKLKEALTILDYLDKQ--GIPVNPTTFSSLLASVVRSKSLTHG 755
SKN HS ++ K + + Y + + + +N TFS++L S + + G
Sbjct: 172 SKNVHSWNALLRGTVISGKKRYLDVLSTYSEMRLLAVKLNVYTFSAVLKSFAGASAFRQG 231
Query: 754 RQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNV 575
+ HA + NG ++ LRT L+ Y CG I+ A +V + I E + W A++ G
Sbjct: 232 LKTHALLIKNGFIDSSMLRTGLIDFYFKCGKIKLACRVLEEIP--ERDIVLWGAMIAG-- 287
Query: 574 VQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADG 395
R +E L M GI N ++++ A G + HA ++K
Sbjct: 288 FAHNRMQKEALSYVRWMISAGIYPNSVILTTILPVIGEVWARKLGREIHAYVVKTKSYSK 347
Query: 394 SIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMR 215
++IQ+ L+DMY KC + R+VF +R+ + W A++SG+ N +AL WM+
Sbjct: 348 QLVIQSGLVDMYCKCGDMDSGRRVFYCSRERNAISWTALMSGYVSNGRLNQALRSVVWMQ 407
Query: 214 SEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDM 35
EG +P+ V + ILPV E+ A GKE+H Y +K + + I +SL+ MYSKCG +
Sbjct: 408 QEGFKPDVVTVATILPVCAELRALSHGKEIHAYAVK-NCFFPNVSIVTSLMIMYSKCGVL 466
Query: 34 ASGRRVF 14
++F
Sbjct: 467 DYSLKLF 473
Score = 94.0 bits (232), Expect = 1e-16
Identities = 59/242 (24%), Positives = 115/242 (47%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+ +L +AL + ++ ++G + T +++L ++L+HG++IHA+ N N
Sbjct: 390 YVSNGRLNQALRSVVWMQQEGFKPDVVTVATILPVCAELRALSHGKEIHAYAVKNCFFPN 449
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
+ T L+ MY+ CG ++ + K+F+G M +V W A++ V G E L +
Sbjct: 450 VSIVTSLMIMYSKCGVLDYSLKLFNG--MEARNVISWTAMIESYVKSG--HLHEALSVFR 505
Query: 529 KMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKC 350
M+ + + ++ + A+ G + H ++K F + + ++ MY C
Sbjct: 506 SMQFSKHRPDSVAMARMLNVCSELRAVKLGKEIHGQVLKKDF-ESIPFVSAGIVKMYGSC 564
Query: 349 CKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAIL 170
I A+ VFE + + + W A+I +G+N L ++A+ F M S+ PN +L
Sbjct: 565 GLISTAKLVFEAVPVKGTMTWTAIIEAYGYNDLCEDAISLFHQMASDDFIPNHFTFKVVL 624
Query: 169 PV 164
V
Sbjct: 625 SV 626
>ref|XP_002325518.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550317217|gb|EEE99899.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 678
Score = 447 bits (1151), Expect = e-123
Identities = 216/325 (66%), Positives = 267/325 (82%)
Frame = -3
Query: 976 QRFSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSS 797
Q+F E+DAFP SLPLH KNP + YKDIQRF+R+++LK+AL I+DY+D+QGIPVNPTTFS+
Sbjct: 49 QQFDERDAFPASLPLHKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSA 108
Query: 796 LLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVE 617
L+A+ +RSKSLT ++IH H+RINGL NN+FLRTKLVHMYTSCGSIEDA+ VFD +
Sbjct: 109 LIAACIRSKSLTKAKEIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECTST- 167
Query: 616 SSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGM 437
++VYPWNAL+RG V+ G +RY +VL Y +MR G+ELN YTFS++IKSFAG+SAL QG
Sbjct: 168 ATVYPWNALIRGTVISGKKRYGDVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGF 227
Query: 436 KAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHN 257
K HAI+IKNG S +++T LIDMYFKC K +LA VFEE+L+RD+V WGAMI+GF HN
Sbjct: 228 KTHAIMIKNGMIS-SAVLRTCLIDMYFKCGKTRLAHNVFEELLERDIVAWGAMIAGFAHN 286
Query: 256 RLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFI 77
R Q EALD RWM SEG+ PNSVI+T+ILPVIGE+WA +LG+EVH YV+K K Y ++L I
Sbjct: 287 RRQWEALDYVRWMVSEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSI 346
Query: 76 QSSLIDMYSKCGDMASGRRVFYESK 2
QS LIDMY KCGDM SGRRVFY S+
Sbjct: 347 QSGLIDMYCKCGDMGSGRRVFYGSR 371
Score = 137 bits (345), Expect = 9e-30
Identities = 87/284 (30%), Positives = 144/284 (50%)
Frame = -3
Query: 865 EALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLV 686
+ L+ + G+ +N TFS+++ S + +L G + HA + NG+ ++ LRT L+
Sbjct: 190 DVLSAYQEMRVNGVELNEYTFSNVIKSFAGASALKQGFKTHAIMIKNGMISSAVLRTCLI 249
Query: 685 HMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIE 506
MY CG A VF+ ++E + W A++ G RR E L M G+
Sbjct: 250 DMYFKCGKTRLAHNVFE--ELLERDIVAWGAMIAG--FAHNRRQWEALDYVRWMVSEGMY 305
Query: 505 LNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQ 326
N +S++ A G + H ++K + IQ+ LIDMY KC + R+
Sbjct: 306 PNSVIITSILPVIGEVWARRLGQEVHCYVLKMKGYSRELSIQSGLIDMYCKCGDMGSGRR 365
Query: 325 VFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWA 146
VF +R+VV W A++SG+ N ++AL WM+ EG P+ V + ++PV ++
Sbjct: 366 VFYGSRERNVVSWTALMSGYVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKT 425
Query: 145 WKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
K GKE+H + +K K + + + +SLI MYSKCG + ++F
Sbjct: 426 LKHGKEIHAFSVK-KLFLPNVSLTTSLIKMYSKCGVLDYSVKLF 468
Score = 134 bits (337), Expect = 8e-29
Identities = 86/296 (29%), Positives = 151/296 (51%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RING 722
I FA + EAL + ++ +G+ N +S+L + + G+++H ++ ++ G
Sbjct: 280 IAGFAHNRRQWEALDYVRWMVSEGMYPNSVIITSILPVIGEVWARRLGQEVHCYVLKMKG 339
Query: 721 LDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
+++ L+ MY CG + +VF G E +V W AL+ G V G R + L
Sbjct: 340 YSRELSIQSGLIDMYCKCGDMGSGRRVFYGSR--ERNVVSWTALMSGYVSNG--RLEQAL 395
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ M++ G +V T +++I A L G + HA +K F ++ + TSLI M
Sbjct: 396 RSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLP-NVSLTTSLIKM 454
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC + + ++F+ + R+V+ W AMI + N EA + FR+M+ P+SV +
Sbjct: 455 YSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENGCINEAFNVFRFMQWSKHRPDSVTM 514
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+L + ++ K GKE+HG+++K K++ F+ S L+ MY CG + S VF
Sbjct: 515 ARMLSICSKIKTLKFGKEIHGHILK-KDFESIPFVSSELVKMYGSCGLVHSAESVF 569
Score = 90.9 bits (224), Expect = 1e-15
Identities = 60/245 (24%), Positives = 113/245 (46%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+ +L++AL + ++ ++G + T ++++ + K+L HG++IHA N
Sbjct: 385 YVSNGRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPN 444
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
L T L+ MY+ CG ++ + K+FDG M +V W A++ V G E +
Sbjct: 445 VSLTTSLIKMYSKCGVLDYSVKLFDG--MEARNVIAWTAMIDSYVENGC--INEAFNVFR 500
Query: 529 KMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKC 350
M+ + T + ++ + L G + H ++K F + + + L+ MY C
Sbjct: 501 FMQWSKHRPDSVTMARMLSICSKIKTLKFGKEIHGHILKKDF-ESIPFVSSELVKMYGSC 559
Query: 349 CKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAIL 170
+ A VF + + + W A+I +G+N L ++A+ F MRS PN +L
Sbjct: 560 GLVHSAESVFNAVPVKGSMTWTAIIEAYGYNSLWQDAIKLFDEMRSRKFTPNDFTFKVVL 619
Query: 169 PVIGE 155
+ E
Sbjct: 620 SICDE 624
>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Glycine max]
Length = 682
Score = 446 bits (1148), Expect = e-123
Identities = 214/323 (66%), Positives = 273/323 (84%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F+E+DAFP SLPLH+KNP +KDI+RFARQ+KLKEALTILDY+D++GIPV+ TTFSS++
Sbjct: 61 FTEKDAFPSSLPLHNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVV 120
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ +R+KSL GR++H HIRINGL+NN FLRTKLVHMYT+CGS+EDA+K+FDG+ S
Sbjct: 121 AACIRAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPC--ES 178
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VYPWNALLRG VV G R+Y +VL TY++MR LG+ELNVY+FS++IKSFAG+ A +QG+K
Sbjct: 179 VYPWNALLRGTVVSGKRQYIDVLKTYTEMRALGVELNVYSFSNVIKSFAGARAFSQGLKT 238
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
H +LIKNG D + I++TSLIDMYFKC K++LA +VFEEI +RDVVVWGAM++GF HNRL
Sbjct: 239 HGLLIKNGLVD-NYILRTSLIDMYFKCGKVRLACRVFEEIPERDVVVWGAMLAGFAHNRL 297
Query: 250 QKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQS 71
Q+E L+ RWM EG++PNSV++T ++PVIGE+ A +LG+E H YV+KTK+Y K + +QS
Sbjct: 298 QREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSKLVPVQS 357
Query: 70 SLIDMYSKCGDMASGRRVFYESK 2
SLIDMY KCGDM S RRVFY SK
Sbjct: 358 SLIDMYCKCGDMISARRVFYGSK 380
Score = 154 bits (389), Expect = 7e-35
Identities = 95/272 (34%), Positives = 147/272 (54%)
Frame = -3
Query: 829 GIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDA 650
G+ +N +FS+++ S +++ + G + H + NGL +N LRT L+ MY CG + A
Sbjct: 211 GVELNVYSFSNVIKSFAGARAFSQGLKTHGLLIKNGLVDNYILRTSLIDMYFKCGKVRLA 270
Query: 649 EKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKS 470
+VF+ I E V W A+L G R REVL M E G++ N + +I
Sbjct: 271 CRVFEEIP--ERDVVVWGAMLAG--FAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPV 326
Query: 469 FAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVV 290
A G + HA ++K + +Q+SLIDMY KC + AR+VF +R+VV
Sbjct: 327 IGEVCARRLGQEFHAYVVKTKSYSKLVPVQSSLIDMYCKCGDMISARRVFYGSKERNVVC 386
Query: 289 WGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVI 110
W A++SG+ N ++AL WM+ EG P+ V L +LPV ++ A + GK++H Y +
Sbjct: 387 WTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYAL 446
Query: 109 KTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
K + + + SSL+ MYSKCG + RR+F
Sbjct: 447 K-HWFLPNVSVASSLMTMYSKCGVVEYSRRLF 477
Score = 126 bits (317), Expect = 2e-26
Identities = 83/293 (28%), Positives = 150/293 (51%), Gaps = 1/293 (0%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RINGLDN 713
FA +E L + ++ ++G+ N + ++ + + G++ HA++ +
Sbjct: 292 FAHNRLQREVLEYVRWMVEEGVKPNSVVMTIVIPVIGEVCARRLGQEFHAYVVKTKSYSK 351
Query: 712 NDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTY 533
+++ L+ MY CG + A +VF G E +V W AL+ G G + + L +
Sbjct: 352 LVPVQSSLIDMYCKCGDMISARRVFYGSK--ERNVVCWTALMSGYAANG--KLEQALRST 407
Query: 532 SKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFK 353
M++ G +V T ++++ A AL QG + HA +K+ F ++ + +SL+ MY K
Sbjct: 408 IWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLP-NVSVASSLMTMYSK 466
Query: 352 CCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAI 173
C ++ +R++F+ + R+V+ W AMI + N EAL R M+ P+SV + +
Sbjct: 467 CGVVEYSRRLFDNMEQRNVISWTAMIDSYIENGYLCEALGVIRSMQLSKHRPDSVAIGRM 526
Query: 172 LPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
L V GE KLGKE+HG ++K +++ F+ + LI+MY GD+ VF
Sbjct: 527 LSVCGERKLVKLGKEIHGQILK-RDFTSVHFVSAELINMYGFFGDINKANLVF 578
Score = 78.2 bits (191), Expect = 7e-12
Identities = 58/242 (23%), Positives = 110/242 (45%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A KL++AL ++ ++G + T +++L + ++L G+QIHA+ + N
Sbjct: 394 YAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQGKQIHAYALKHWFLPN 453
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
+ + L+ MY+ CG +E + ++FD +M + +V W A++ + G E L
Sbjct: 454 VSVASSLMTMYSKCGVVEYSRRLFD--NMEQRNVISWTAMIDSYIENG--YLCEALGVIR 509
Query: 529 KMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKC 350
M+ + ++ + G + H ++K F + LI+MY
Sbjct: 510 SMQLSKHRPDSVAIGRMLSVCGERKLVKLGKEIHGQILKRDFTSVHFV-SAELINMYGFF 568
Query: 349 CKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAIL 170
I A VF + + + W A+I +G+N L ++A++ F MR PN AIL
Sbjct: 569 GDINKANLVFNAVPVKGSMTWTALIRAYGYNELYQDAVNLFDQMR---YSPNHFTFEAIL 625
Query: 169 PV 164
+
Sbjct: 626 SI 627
>ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Cicer arietinum]
Length = 694
Score = 440 bits (1132), Expect = e-121
Identities = 222/326 (68%), Positives = 268/326 (82%), Gaps = 4/326 (1%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F E+DAFP SLPLH+KNP YKDI+ FARQ+KLKEALTILDY+D+QGIPVN TTFSSL+
Sbjct: 64 FLEEDAFPCSLPLHNKNPLFIYKDIKNFARQNKLKEALTILDYVDQQGIPVNATTFSSLI 123
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ +R+ SL+ GRQ+H HIRINGL NN FL+TKLV MYTSCGS EDA K+FD ESS
Sbjct: 124 AACIRTNSLSIGRQVHTHIRINGLQNNLFLKTKLVQMYTSCGSFEDAVKLFDESFQSESS 183
Query: 610 VYPWNALLRGNVVQGGRR--YREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGM 437
VYPWNALLRG+VV GG+R Y +VL TYSKMRELG+ELNVY+FSS+IKSFA + AL QG+
Sbjct: 184 VYPWNALLRGSVVSGGKRKQYIDVLKTYSKMRELGVELNVYSFSSVIKSFAAAPALFQGL 243
Query: 436 KAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEI--LDRDVVVWGAMISGFG 263
K HA+L+KNG D S I++T LIDMYFKC K+KLAR VFEEI +RDVVVWGAM++GF
Sbjct: 244 KTHALLVKNGLLD-SDILRTCLIDMYFKCGKVKLARCVFEEIPERERDVVVWGAMLAGFS 302
Query: 262 HNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQL 83
HNRLQ+E L+ +WM EGI PNSVI+T ++PVIGE+ A +LG+EVH +V+KTK+Y K +
Sbjct: 303 HNRLQREVLEYVKWMVEEGIYPNSVIMTIVIPVIGELCARRLGQEVHAFVVKTKSYSKLV 362
Query: 82 FIQSSLIDMYSKCGDMASGRRVFYES 5
+QS+LIDMY KCGD+ S RRVFY S
Sbjct: 363 PVQSALIDMYCKCGDLGSARRVFYSS 388
Score = 153 bits (386), Expect = 2e-34
Identities = 97/294 (32%), Positives = 154/294 (52%), Gaps = 3/294 (1%)
Frame = -3
Query: 874 KLKEALTILDYLDKQ---GIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDF 704
K K+ + +L K G+ +N +FSS++ S + +L G + HA + NGL ++D
Sbjct: 200 KRKQYIDVLKTYSKMRELGVELNVYSFSSVIKSFAAAPALFQGLKTHALLVKNGLLDSDI 259
Query: 703 LRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKM 524
LRT L+ MY CG ++ A VF+ I E V W A+L G R REVL M
Sbjct: 260 LRTCLIDMYFKCGKVKLARCVFEEIPERERDVVVWGAMLAG--FSHNRLQREVLEYVKWM 317
Query: 523 RELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCK 344
E GI N + +I A G + HA ++K + +Q++LIDMY KC
Sbjct: 318 VEEGIYPNSVIMTIVIPVIGELCARRLGQEVHAFVVKTKSYSKLVPVQSALIDMYCKCGD 377
Query: 343 IKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPV 164
+ AR+VF +R+VV W A++SG+ ++AL WM+ EG P+ V + +LP+
Sbjct: 378 LGSARRVFYSSSERNVVCWTALMSGYASVGRLEQALRSIIWMQQEGFRPDVVTVATVLPI 437
Query: 163 IGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVFYESK 2
++ A + GK++H Y +K + + + SSL+ MYSKCG + +F +++
Sbjct: 438 CAQLRALEQGKQIHAYALK-HWFLPNVSVTSSLMVMYSKCGVVEYSATLFDDTE 490
Score = 122 bits (306), Expect = 3e-25
Identities = 82/293 (27%), Positives = 148/293 (50%), Gaps = 1/293 (0%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RINGLDN 713
F+ +E L + ++ ++GI N + ++ + + G+++HA + +
Sbjct: 301 FSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVIPVIGELCARRLGQEVHAFVVKTKSYSK 360
Query: 712 NDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTY 533
+++ L+ MY CG + A +VF S E +V W AL+ G G R + L +
Sbjct: 361 LVPVQSALIDMYCKCGDLGSARRVF--YSSSERNVVCWTALMSGYASVG--RLEQALRSI 416
Query: 532 SKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFK 353
M++ G +V T ++++ A AL QG + HA +K+ F ++ + +SL+ MY K
Sbjct: 417 IWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLP-NVSVTSSLMVMYSK 475
Query: 352 CCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAI 173
C ++ + +F++ R+V+ W AMI + N EAL R M+ P+S+ + +
Sbjct: 476 CGVVEYSATLFDDTEQRNVISWTAMIDSYIENGYLYEALGVIRSMQLSKHRPDSIAIARM 535
Query: 172 LPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
L V ++ KLGKE+HG +K +++ F+ S LIDMY GD+ + VF
Sbjct: 536 LSVCSQLKLLKLGKEIHGQTLK-RDFALVHFVSSELIDMYGTFGDVDKAKLVF 587
Score = 90.1 bits (222), Expect = 2e-15
Identities = 62/242 (25%), Positives = 115/242 (47%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A +L++AL + ++ ++G + T +++L + ++L G+QIHA+ + N
Sbjct: 403 YASVGRLEQALRSIIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPN 462
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
+ + L+ MY+ CG +E + +FD + +V W A++ + ++ G Y E L
Sbjct: 463 VSVTSSLMVMYSKCGVVEYSATLFDDTE--QRNVISWTAMI-DSYIENGYLY-EALGVIR 518
Query: 529 KMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKC 350
M+ + + ++ + L G + H +K FA + + LIDMY
Sbjct: 519 SMQLSKHRPDSIAIARMLSVCSQLKLLKLGKEIHGQTLKRDFALVHFV-SSELIDMYGTF 577
Query: 349 CKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAIL 170
+ A+ VF + + + W A+I +GHN + A+D F MRS G PN AIL
Sbjct: 578 GDVDKAKLVFSAVPVKGSMTWTALIRAYGHNEFYQGAIDLFHQMRSNGFSPNHFTFEAIL 637
Query: 169 PV 164
+
Sbjct: 638 SI 639
>ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 683
Score = 439 bits (1128), Expect = e-120
Identities = 216/322 (67%), Positives = 269/322 (83%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F E+DAFP SLPLH+KNP + YKDIQRFA Q+KL EALTILDYLD+QGIPVN TTFS L+
Sbjct: 57 FEERDAFPESLPLHTKNPRAVYKDIQRFAAQNKLNEALTILDYLDQQGIPVNATTFSHLI 116
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
+ VR++SL G++IH +I INGL++++FLR KLV+MYTS G+++DA +FD M +
Sbjct: 117 TACVRTRSLDTGKKIHKYIWINGLESSEFLRQKLVNMYTSFGAVDDAHHLFD--QMPGKN 174
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VY WNALLRG VV GG+RYR+VL TYS+MRELG+E+NVY+FS++IKSFAG+SAL+QG+K
Sbjct: 175 VYTWNALLRGTVVAGGKRYRDVLETYSEMRELGVEMNVYSFSNVIKSFAGASALSQGLKT 234
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+L+KNG GS+I++TSL+DMYFKC KIKLAR VFEE+ +RDVV+WGAMI+GF HNRL
Sbjct: 235 HALLVKNGLI-GSVIVRTSLVDMYFKCGKIKLARLVFEEVGERDVVLWGAMIAGFAHNRL 293
Query: 250 QKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQS 71
+KEAL R M EGI PNSVILT++LPVIGE+ A KLG+E H YV+KTK+Y +Q F+QS
Sbjct: 294 RKEALQHLRIMVEEGIMPNSVILTSVLPVIGELSARKLGQEAHAYVVKTKSYLRQAFVQS 353
Query: 70 SLIDMYSKCGDMASGRRVFYES 5
+LIDMY KCGDM GRRVFY S
Sbjct: 354 ALIDMYCKCGDMEMGRRVFYSS 375
Score = 152 bits (383), Expect = 4e-34
Identities = 94/287 (32%), Positives = 152/287 (52%)
Frame = -3
Query: 874 KLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRT 695
+ ++ L + + G+ +N +FS+++ S + +L+ G + HA + NGL + +RT
Sbjct: 192 RYRDVLETYSEMRELGVEMNVYSFSNVIKSFAGASALSQGLKTHALLVKNGLIGSVIVRT 251
Query: 694 KLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMREL 515
LV MY CG I+ A VF+ + E V W A++ G R +E L M E
Sbjct: 252 SLVDMYFKCGKIKLARLVFEEVG--ERDVVLWGAMIAG--FAHNRLRKEALQHLRIMVEE 307
Query: 514 GIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKL 335
GI N +S++ SA G +AHA ++K +Q++LIDMY KC +++
Sbjct: 308 GIMPNSVILTSVLPVIGELSARKLGQEAHAYVVKTKSYLRQAFVQSALIDMYCKCGDMEM 367
Query: 334 ARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGE 155
R+VF ++R+ + W A++SG+ N ++AL WM+ EG +P+ V + LPV E
Sbjct: 368 GRRVFYSSVERNAICWTALMSGYAANGRLEQALRSVIWMQQEGFKPDVVTVATALPVCAE 427
Query: 154 MWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+ K GKE+H Y +K + + I SSL+ MYSKCG + R+F
Sbjct: 428 LKDLKRGKEIHAYAVK-NCFLPNVSIVSSLMVMYSKCGVLDYSIRLF 473
Score = 125 bits (314), Expect = 4e-26
Identities = 87/296 (29%), Positives = 146/296 (49%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RING 722
I FA KEAL L + ++GI N +S+L + + G++ HA++ +
Sbjct: 285 IAGFAHNRLRKEALQHLRIMVEEGIMPNSVILTSVLPVIGELSARKLGQEAHAYVVKTKS 344
Query: 721 LDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
F+++ L+ MY CG +E +VF S VE + W AL+ G G R + L
Sbjct: 345 YLRQAFVQSALIDMYCKCGDMEMGRRVF--YSSVERNAICWTALMSGYAANG--RLEQAL 400
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ M++ G + +V T ++ + A L +G + HA +KN F ++ I +SL+ M
Sbjct: 401 RSVIWMQQEGFKPDVVTVATALPVCAELKDLKRGKEIHAYAVKNCFLP-NVSIVSSLMVM 459
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC + + ++F+ + R+V+ W AMI N AL R M P+SV +
Sbjct: 460 YSKCGVLDYSIRLFDGMEQRNVITWTAMIDSLVENGCLDGALGVIRSMLLSKHRPDSVAM 519
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+ +L + G + KLGKE+H V+K KN+ F+ + L+ MY +C + + F
Sbjct: 520 SRMLAICGGLKNLKLGKEIHAQVLK-KNFDSVPFVSAELVKMYGRCAAIDHAKSFF 574
Score = 84.7 bits (208), Expect = 7e-14
Identities = 63/247 (25%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A +L++AL + ++ ++G + T ++ L K L G++IHA+ N N
Sbjct: 390 YAANGRLEQALRSVIWMQQEGFKPDVVTVATALPVCAELKDLKRGKEIHAYAVKNCFLPN 449
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRR-----YREV 545
+ + L+ MY+ CG ++ + ++FDG M + +V W A++ V G R +
Sbjct: 450 VSIVSSLMVMYSKCGVLDYSIRLFDG--MEQRNVITWTAMIDSLVENGCLDGALGVIRSM 507
Query: 544 LFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLID 365
L SK R + + S ++ G L G + HA ++K F D + L+
Sbjct: 508 LL--SKHRPDSVAM-----SRMLAICGGLKNLKLGKEIHAQVLKKNF-DSVPFVSAELVK 559
Query: 364 MYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVI 185
MY +C I A+ F+ I + + A+I +G+ + +EA+ F MRS+ + PN+
Sbjct: 560 MYGRCAAIDHAKSFFDTIPVKGSMTRTAIIEAYGYAGMYQEAISLFDQMRSKDLTPNNFT 619
Query: 184 LTAILPV 164
+L +
Sbjct: 620 FQVVLSI 626
>ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297334679|gb|EFH65097.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 688
Score = 438 bits (1126), Expect = e-120
Identities = 213/324 (65%), Positives = 271/324 (83%), Gaps = 1/324 (0%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F E+DAFP SLPLHSKNPHS ++DIQRFAR++ L++ALTILDYL+++GIPVN TTFS+LL
Sbjct: 58 FRERDAFPSSLPLHSKNPHSIHRDIQRFARKNNLEDALTILDYLEQRGIPVNATTFSALL 117
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ VR KSL HG+Q+H HIRINGL++N+F+RTKLVHMYT+CGS+ DA+KVFD S+
Sbjct: 118 AACVRRKSLLHGKQVHVHIRINGLESNEFIRTKLVHMYTACGSVRDAQKVFD--ESTSSN 175
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VY WNALLRG V+ G +RY++VL T+++MRELG++LNVY+FS++ KSFAG+SAL QG+K
Sbjct: 176 VYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSFSNVFKSFAGASALRQGLKT 235
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+ IKNG + S+ ++TSL+DMYFKC K+ LAR+VF+EI++RD+VVWGAMI+G HN+
Sbjct: 236 HALAIKNGLFN-SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKR 294
Query: 250 QKEALDCFRWMRS-EGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQ 74
Q EAL FR M S EGI PNSVILT ILPV+G++ A KLGKEVH +V+K KNY +Q F+
Sbjct: 295 QWEALGLFRSMISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKMKNYLEQPFVH 354
Query: 73 SSLIDMYSKCGDMASGRRVFYESK 2
S LID+Y KCGDM SGRRVFY SK
Sbjct: 355 SGLIDLYCKCGDMVSGRRVFYGSK 378
Score = 143 bits (361), Expect = 1e-31
Identities = 88/278 (31%), Positives = 145/278 (52%)
Frame = -3
Query: 874 KLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRT 695
+ ++ L+ + + G+ +N +FS++ S + +L G + HA NGL N+ FL+T
Sbjct: 193 RYQDVLSTFTEMRELGVDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKT 252
Query: 694 KLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMREL 515
LV MY CG + A +VFD I VE + W A++ G + R++ + S + E
Sbjct: 253 SLVDMYFKCGKVGLARRVFDEI--VERDIVVWGAMIAG-LAHNKRQWEALGLFRSMISEE 309
Query: 514 GIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKL 335
GI N ++++ AL G + HA ++K + + LID+Y KC +
Sbjct: 310 GIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKMKNYLEQPFVHSGLIDLYCKCGDMVS 369
Query: 334 ARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGE 155
R+VF R+ + W A++SG+ N +AL WM+ EG +P+ V + +LPV E
Sbjct: 370 GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAE 429
Query: 154 MWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCG 41
+ A K GKE+H Y +K + + + +SL+ MYSKCG
Sbjct: 430 LRAIKQGKEIHCYALKNL-FLPNVSLVTSLMVMYSKCG 466
Score = 129 bits (325), Expect = 2e-27
Identities = 84/297 (28%), Positives = 152/297 (51%), Gaps = 2/297 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTIL-DYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RIN 725
I A + EAL + + ++GI N +++L + K+L G+++HAH+ ++
Sbjct: 286 IAGLAHNKRQWEALGLFRSMISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKMK 345
Query: 724 GLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREV 545
F+ + L+ +Y CG + +VF G + + W AL+ G G R+ +
Sbjct: 346 NYLEQPFVHSGLIDLYCKCGDMVSGRRVFYGSK--QRNAISWTALMSGYAANG--RFDQA 401
Query: 544 LFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLID 365
L + M++ G + +V T ++++ A A+ QG + H +KN F ++ + TSL+
Sbjct: 402 LRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLP-NVSLVTSLMV 460
Query: 364 MYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVI 185
MY KC + ++F+ + R+V W AMI + N + ++ FR M P+SV
Sbjct: 461 MYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDLRAGIEVFRSMLLSKHRPDSVT 520
Query: 184 LTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
+ +L V ++ A KLGKE+HG+++K K + F+ + +I MY +CGD+ S F
Sbjct: 521 MGRVLTVCSDLKALKLGKELHGHILK-KEFESIPFVSAKIIKMYGQCGDLRSANFSF 576
Score = 89.7 bits (221), Expect = 2e-15
Identities = 70/297 (23%), Positives = 136/297 (45%), Gaps = 6/297 (2%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A + +AL + ++ ++G + T +++L +++ G++IH + N N
Sbjct: 392 YAANGRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPN 451
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRR-----YREV 545
L T L+ MY+ CG E ++FD + + +V W A++ V G R +R +
Sbjct: 452 VSLVTSLMVMYSKCGVPEYPVRLFDRLE--QRNVKAWTAMIDCYVENGDLRAGIEVFRSM 509
Query: 544 LFTYSKMRELGIELN-VYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLI 368
L SK R + + V T S +K AL G + H ++K F + + +I
Sbjct: 510 LL--SKHRPDSVTMGRVLTVCSDLK------ALKLGKELHGHILKKEF-ESIPFVSAKII 560
Query: 367 DMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSV 188
MY +C ++ A F+ ++ + + W A+I +G+N ++A+ CF M S G PN+
Sbjct: 561 KMYGQCGDLRSANFSFDAVVVKGSLTWTAIIEAYGYNGRFRDAIKCFEQMVSRGFTPNTF 620
Query: 187 ILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRV 17
TAIL + + +++ N S +I++ ++ G + +R+
Sbjct: 621 TFTAILSICSQAGFADEAYRFFNLMLRMYNLHPSEEHYSLVIELLNRFGRVEEAQRL 677
>ref|XP_007139658.1| hypothetical protein PHAVU_008G048400g [Phaseolus vulgaris]
gi|561012791|gb|ESW11652.1| hypothetical protein
PHAVU_008G048400g [Phaseolus vulgaris]
Length = 674
Score = 437 bits (1125), Expect = e-120
Identities = 211/323 (65%), Positives = 272/323 (84%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F+E+DAFP SLPLH+KNP YKDI+RFARQ+KLKEALTILDY+D++GIPV+ TTFS+++
Sbjct: 53 FTEKDAFPCSLPLHNKNPIFIYKDIKRFARQNKLKEALTILDYVDQRGIPVDSTTFSAVI 112
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ +R+KSL GR++H HIRINGL+NN FLRTKLV MYTSCGS+E+A+K+F+G+ S
Sbjct: 113 AACIRTKSLPQGREVHIHIRINGLENNVFLRTKLVQMYTSCGSLEEAQKLFEGLPC--ES 170
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VYPWNALLRG VV G R+Y +VL TY++MR LG++LNVY+FS++IKSFAG+SA ++G+K
Sbjct: 171 VYPWNALLRGTVVSGERQYIDVLKTYAEMRALGVQLNVYSFSNVIKSFAGASAFSEGLKT 230
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+LIKNGF D + I++TSLIDMYFKC K++LA VFEEI +RDVV WGAM++GF HN++
Sbjct: 231 HALLIKNGFVD-NYILRTSLIDMYFKCGKVRLACHVFEEIPERDVVAWGAMLAGFAHNKM 289
Query: 250 QKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQS 71
QKE L+ RWM EG++PNSV++ +PVIGE+ A +LG+E H YV+KTK+Y KQ+ IQS
Sbjct: 290 QKEVLEYVRWMVKEGMKPNSVVIAIAVPVIGEVCARRLGQEFHAYVLKTKSYSKQVPIQS 349
Query: 70 SLIDMYSKCGDMASGRRVFYESK 2
+LIDMY KCGDM S RRVFY SK
Sbjct: 350 ALIDMYCKCGDMISARRVFYGSK 372
Score = 141 bits (355), Expect = 6e-31
Identities = 88/272 (32%), Positives = 143/272 (52%)
Frame = -3
Query: 829 GIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDA 650
G+ +N +FS+++ S + + + G + HA + NG +N LRT L+ MY CG + A
Sbjct: 203 GVQLNVYSFSNVIKSFAGASAFSEGLKTHALLIKNGFVDNYILRTSLIDMYFKCGKVRLA 262
Query: 649 EKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKS 470
VF+ I E V W A+L G + +EVL M + G++ N + +
Sbjct: 263 CHVFEEIP--ERDVVAWGAMLAG--FAHNKMQKEVLEYVRWMVKEGMKPNSVVIAIAVPV 318
Query: 469 FAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVV 290
A G + HA ++K + IQ++LIDMY KC + AR+VF +R+VV
Sbjct: 319 IGEVCARRLGQEFHAYVLKTKSYSKQVPIQSALIDMYCKCGDMISARRVFYGSKERNVVC 378
Query: 289 WGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVI 110
W A+++G+ N ++AL WM+ EG P+ V + +LPV ++ A + G+++H Y +
Sbjct: 379 WTALMAGYAVNGKLEQALRSTIWMQQEGFRPDVVTVATVLPVCAQLRALEQGRQIHAYAL 438
Query: 109 KTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
K + + I S L+ MYSKCG + RR+F
Sbjct: 439 K-HWFLPNVSITSQLMMMYSKCGVVEYSRRLF 469
Score = 130 bits (326), Expect = 1e-27
Identities = 85/293 (29%), Positives = 152/293 (51%), Gaps = 1/293 (0%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RINGLDN 713
FA KE L + ++ K+G+ N + + + + G++ HA++ +
Sbjct: 284 FAHNKMQKEVLEYVRWMVKEGMKPNSVVIAIAVPVIGEVCARRLGQEFHAYVLKTKSYSK 343
Query: 712 NDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTY 533
+++ L+ MY CG + A +VF G E +V W AL+ G V G + + L +
Sbjct: 344 QVPIQSALIDMYCKCGDMISARRVFYGSK--ERNVVCWTALMAGYAVNG--KLEQALRST 399
Query: 532 SKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFK 353
M++ G +V T ++++ A AL QG + HA +K+ F ++ I + L+ MY K
Sbjct: 400 IWMQQEGFRPDVVTVATVLPVCAQLRALEQGRQIHAYALKHWFLP-NVSITSQLMMMYSK 458
Query: 352 CCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAI 173
C ++ +R++F+ + R+V+ W AMI F +N EAL R M+ P+SV + +
Sbjct: 459 CGVVEYSRRLFDNMEQRNVISWTAMIDSFINNGHLCEALGVMRSMQLSKYRPDSVAIGRM 518
Query: 172 LPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
L V GE+ KLG+E+HG ++K +++ + F+ + LI+ Y GD+ + VF
Sbjct: 519 LSVCGELKLVKLGQEIHGQILK-RDFARVPFVSAELINTYGSFGDVNKAKLVF 570
Score = 84.0 bits (206), Expect = 1e-13
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A KL++AL ++ ++G + T +++L + ++L GRQIHA+ + N
Sbjct: 386 YAVNGKLEQALRSTIWMQQEGFRPDVVTVATVLPVCAQLRALEQGRQIHAYALKHWFLPN 445
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
+ ++L+ MY+ CG +E + ++FD +M + +V W A++ + G +
Sbjct: 446 VSITSQLMMMYSKCGVVEYSRRLFD--NMEQRNVISWTAMIDSFINNG-----HLCEALG 498
Query: 529 KMRELGIELNVYTFSSL----IKSFAGSSALTQ-GMKAHAILIKNGFADGSIIIQTSLID 365
MR + +L+ Y S+ + S G L + G + H ++K FA + LI+
Sbjct: 499 VMRSM--QLSKYRPDSVAIGRMLSVCGELKLVKLGQEIHGQILKRDFARVPFV-SAELIN 555
Query: 364 MYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVI 185
Y + A+ VF + +D + W A+I +G+N +A++ F MRS PN
Sbjct: 556 TYGSFGDVNKAKLVFNAVPVKDSITWTALIKAYGYNEFYHDAINLFDHMRS---SPNHFT 612
Query: 184 LTAILPV 164
AIL +
Sbjct: 613 FAAILSI 619
>ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
chloroplastic-like [Solanum lycopersicum]
Length = 674
Score = 435 bits (1119), Expect = e-119
Identities = 218/324 (67%), Positives = 266/324 (82%)
Frame = -3
Query: 973 RFSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSL 794
++ + + + L +H+KNPH+ YKDIQRFA Q+KLKEALTILDYLD +GIPVNPTTF+SL
Sbjct: 47 KYPKHNNLRNLLSVHTKNPHAIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASL 106
Query: 793 LASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVES 614
+A+ VR KSLT + +H H+ INGL+NN+FL+TK+V+MY +CGSIEDA+KVFD M
Sbjct: 107 IAACVRLKSLTSAKIVHTHVIINGLENNEFLQTKVVNMYAACGSIEDAKKVFD--KMPVR 164
Query: 613 SVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMK 434
SVYPWNALLRGNVV GG +Y EVL T+S MR LG+ELNVY+FS LIKSFAG+SAL QG+K
Sbjct: 165 SVYPWNALLRGNVVLGGSKYGEVLGTFSDMRGLGVELNVYSFSCLIKSFAGASALFQGLK 224
Query: 433 AHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNR 254
H +LIKNGF GS I++TSLIDMYFKC K++LA +VFEE+ +RDVV+WGA+I+GF HN+
Sbjct: 225 THGLLIKNGFL-GSDIVRTSLIDMYFKCGKVRLAHRVFEEVEERDVVMWGAIIAGFAHNK 283
Query: 253 LQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQ 74
Q+EAL+ R M EG+E NSVILT ILPVIGE A KLGKEVH YVIKTK Y KQLFIQ
Sbjct: 284 RQREALEYTRLMIREGLEVNSVILTTILPVIGEARASKLGKEVHAYVIKTKEYSKQLFIQ 343
Query: 73 SSLIDMYSKCGDMASGRRVFYESK 2
S L+DMYSKCGD+ +GR+VFY SK
Sbjct: 344 SGLVDMYSKCGDIIAGRKVFYRSK 367
Score = 154 bits (390), Expect = 5e-35
Identities = 94/288 (32%), Positives = 149/288 (51%), Gaps = 1/288 (0%)
Frame = -3
Query: 874 KLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRT 695
K E L + G+ +N +FS L+ S + +L G + H + NG +D +RT
Sbjct: 183 KYGEVLGTFSDMRGLGVELNVYSFSCLIKSFAGASALFQGLKTHGLLIKNGFLGSDIVRT 242
Query: 694 KLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL-FTYSKMRE 518
L+ MY CG + A +VF+ + E V W A++ G +R RE L +T +RE
Sbjct: 243 SLIDMYFKCGKVRLAHRVFEEVE--ERDVVMWGAIIAG--FAHNKRQREALEYTRLMIRE 298
Query: 517 LGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIK 338
G+E+N ++++ + A G + HA +IK + IQ+ L+DMY KC I
Sbjct: 299 -GLEVNSVILTTILPVIGEARASKLGKEVHAYVIKTKEYSKQLFIQSGLVDMYSKCGDII 357
Query: 337 LARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIG 158
R+VF +R+ + W A+ISG+ N ++AL WM+ EG +P+ V + +LPV G
Sbjct: 358 AGRKVFYRSKERNAISWTALISGYILNGRLEQALRSILWMQQEGFKPDLVTVATVLPVCG 417
Query: 157 EMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
++ K GKE+H Y +K + + + L+ MYSKCG + RVF
Sbjct: 418 KLKELKYGKEIHAYAVK-NGFLPNTSVSTCLMMMYSKCGLLQYSSRVF 464
Score = 135 bits (340), Expect = 3e-29
Identities = 85/296 (28%), Positives = 153/296 (51%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAH-IRING 722
I FA + +EAL + ++G+ VN +++L + +++ G+++HA+ I+
Sbjct: 276 IAGFAHNKRQREALEYTRLMIREGLEVNSVILTTILPVIGEARASKLGKEVHAYVIKTKE 335
Query: 721 LDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
F+++ LV MY+ CG I KVF E + W AL+ G ++ G R + L
Sbjct: 336 YSKQLFIQSGLVDMYSKCGDIIAGRKVF--YRSKERNAISWTALISGYILNG--RLEQAL 391
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ M++ G + ++ T ++++ L G + HA +KNGF + + T L+ M
Sbjct: 392 RSILWMQQEGFKPDLVTVATVLPVCGKLKELKYGKEIHAYAVKNGFLPNTSV-STCLMMM 450
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC ++ + +VF+ + R+V+ W AM+ + + +EAL FR M+ +SV +
Sbjct: 451 YSKCGLLQYSSRVFDSMAKRNVISWTAMMDSYIDSGCLEEALGVFRSMQLSKHRADSVAM 510
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
IL V G++ KLG+E+HG ++K K+ F+ + L+ MY CG + R F
Sbjct: 511 GRILGVCGKLRLLKLGREIHGQILK-KDIASVPFVSAELVKMYGSCGAIDKSRLSF 565
Score = 83.2 bits (204), Expect = 2e-13
Identities = 59/245 (24%), Positives = 112/245 (45%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGL 719
I + +L++AL + ++ ++G + T +++L + K L +G++IHA+ NG
Sbjct: 378 ISGYILNGRLEQALRSILWMQQEGFKPDLVTVATVLPVCGKLKELKYGKEIHAYAVKNGF 437
Query: 718 DNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLF 539
N + T L+ MY+ CG ++ + +VFD SM + +V W A++ + G E L
Sbjct: 438 LPNTSVSTCLMMMYSKCGLLQYSSRVFD--SMAKRNVISWTAMMDSYIDSGC--LEEALG 493
Query: 538 TYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMY 359
+ M+ + ++ L G + H ++K A + L+ MY
Sbjct: 494 VFRSMQLSKHRADSVAMGRILGVCGKLRLLKLGREIHGQILKKDIASVPFV-SAELVKMY 552
Query: 358 FKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILT 179
C I +R F+ I + + W A+I +G + A++ F+ M S+G PN
Sbjct: 553 GSCGAIDKSRLSFDIIPIKGSMTWTAIIEAYGLSGQYGAAINEFKQMISKGFNPNHFTFK 612
Query: 178 AILPV 164
+L +
Sbjct: 613 VVLSI 617
>ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutrema salsugineum]
gi|557087203|gb|ESQ28055.1| hypothetical protein
EUTSA_v10019712mg [Eutrema salsugineum]
Length = 688
Score = 431 bits (1107), Expect = e-118
Identities = 215/324 (66%), Positives = 267/324 (82%), Gaps = 1/324 (0%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F E+DAFP SLPLHSKNP+ ++DIQ FARQ+KL++ALTILDYL+++GIPVN TTFS+LL
Sbjct: 58 FRERDAFPSSLPLHSKNPYIIHRDIQNFARQNKLEDALTILDYLEQRGIPVNATTFSALL 117
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ VR KSL+ G+Q+H HIRINGL+NN+FL TKLVHMYT+CGSI+DA+KVFD S+
Sbjct: 118 AACVRRKSLSLGKQVHVHIRINGLENNEFLGTKLVHMYTACGSIKDAQKVFD--ESTSSN 175
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VY WNALLRG V+ G RRY++VL T+++MRE GI+LNVY+FS++ KSFAG+SAL QG+K
Sbjct: 176 VYSWNALLRGTVISGKRRYQDVLSTFAEMREQGIDLNVYSFSNVFKSFAGASALRQGLKT 235
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+ IKNG S+ ++TSL+DMYFKC KI LAR+VF+EI +RD+VVWGAMI+G HN+
Sbjct: 236 HALAIKNGLL-SSVFLKTSLVDMYFKCGKIGLARRVFDEIEERDIVVWGAMIAGLAHNKR 294
Query: 250 QKEALDCFRWMRS-EGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQ 74
Q EAL FR M S EGI PNSVILT ILPV+G++ A KLGKEVH +V+K+KNY +Q F+
Sbjct: 295 QWEALGLFRTMISQEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYLEQPFVH 354
Query: 73 SSLIDMYSKCGDMASGRRVFYESK 2
S LID Y KCGDM SGRRVFY SK
Sbjct: 355 SGLIDFYCKCGDMVSGRRVFYGSK 378
Score = 139 bits (350), Expect = 2e-30
Identities = 86/278 (30%), Positives = 144/278 (51%)
Frame = -3
Query: 874 KLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRT 695
+ ++ L+ + +QGI +N +FS++ S + +L G + HA NGL ++ FL+T
Sbjct: 193 RYQDVLSTFAEMREQGIDLNVYSFSNVFKSFAGASALRQGLKTHALAIKNGLLSSVFLKT 252
Query: 694 KLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMREL 515
LV MY CG I A +VFD I E + W A++ G + R++ + + + +
Sbjct: 253 SLVDMYFKCGKIGLARRVFDEIE--ERDIVVWGAMIAG-LAHNKRQWEALGLFRTMISQE 309
Query: 514 GIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKL 335
GI N ++++ AL G + HA ++K+ + + LID Y KC +
Sbjct: 310 GIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYLEQPFVHSGLIDFYCKCGDMVS 369
Query: 334 ARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGE 155
R+VF R+ + W A++SG+ N +AL WM+ EG P+ V + +LPV E
Sbjct: 370 GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAE 429
Query: 154 MWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCG 41
+ A K GKE+H Y +K + + + +SL+ +YSKCG
Sbjct: 430 LRAVKQGKEIHCYALKNL-FLPNVSLVTSLMVLYSKCG 466
Score = 125 bits (313), Expect = 5e-26
Identities = 80/277 (28%), Positives = 141/277 (50%), Gaps = 1/277 (0%)
Frame = -3
Query: 841 LDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RINGLDNNDFLRTKLVHMYTSCG 665
+ ++GI N +++L + K+L G+++HAH+ + F+ + L+ Y CG
Sbjct: 306 ISQEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYLEQPFVHSGLIDFYCKCG 365
Query: 664 SIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFS 485
+ +VF G + + W AL+ G G R+ + L + M++ G +V T +
Sbjct: 366 DMVSGRRVFYGSK--QRNAISWTALMSGYAANG--RFDQALRSIVWMQQEGFRPDVVTIA 421
Query: 484 SLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILD 305
+++ A A+ QG + H +KN F ++ + TSL+ +Y KC + ++F+++
Sbjct: 422 TVLPVCAELRAVKQGKEIHCYALKNLFLP-NVSLVTSLMVLYSKCGVPEYPVRLFDKLEH 480
Query: 304 RDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEV 125
R+V W AMI + N + + FR M P+SV + IL V E+ A KLGKE+
Sbjct: 481 RNVKAWTAMIDCYVENGDLRAGIKVFRSMLLSKHRPDSVTMGRILTVCSELKALKLGKEI 540
Query: 124 HGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
HG+++K K + F+ + +I MY CGD+ S F
Sbjct: 541 HGHILK-KEFESIPFVSARIIKMYGGCGDLRSANFSF 576
Score = 85.1 bits (209), Expect = 5e-14
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 6/251 (2%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A + +AL + ++ ++G + T +++L +++ G++IH + N N
Sbjct: 392 YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAVKQGKEIHCYALKNLFLPN 451
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALL-----RGNVVQGGRRYREV 545
L T L+ +Y+ CG E ++FD + +V W A++ G++ G + +R +
Sbjct: 452 VSLVTSLMVLYSKCGVPEYPVRLFDKLE--HRNVKAWTAMIDCYVENGDLRAGIKVFRSM 509
Query: 544 LFTYSKMRELGIELN-VYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLI 368
L SK R + + + T S +K AL G + H ++K F + + +I
Sbjct: 510 LL--SKHRPDSVTMGRILTVCSELK------ALKLGKEIHGHILKKEF-ESIPFVSARII 560
Query: 367 DMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSV 188
MY C ++ A F+ ++ + + W A+I +G N ++A++CF M S+G PN+
Sbjct: 561 KMYGGCGDLRSANFSFDAVVVKGSLTWTAIIEAYGCNGRLRDAINCFEQMISKGFTPNAF 620
Query: 187 ILTAILPVIGE 155
TA+L + +
Sbjct: 621 TFTAVLSICSQ 631
>ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Capsella rubella]
gi|482569787|gb|EOA33975.1| hypothetical protein
CARUB_v10021470mg [Capsella rubella]
Length = 688
Score = 430 bits (1105), Expect = e-118
Identities = 211/324 (65%), Positives = 268/324 (82%), Gaps = 1/324 (0%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F E+DAFP SLPLHSKNP S ++DIQ FAR++ L++ALTILDYL+++GIPVN TTFS+LL
Sbjct: 58 FRERDAFPSSLPLHSKNPCSIHRDIQSFARKNNLEDALTILDYLEQRGIPVNATTFSALL 117
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ VR KSL HG+Q+H HIRINGL++N+FLRTKLVHMYT+CGS++DA+KVFD S+
Sbjct: 118 AACVRRKSLIHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFD--ESTSSN 175
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VY WNALLRG V+ G +RY++VL T+++MRE G++LNVY+ S++ KSFAG+SAL QG+K
Sbjct: 176 VYSWNALLRGTVISGKKRYQDVLSTFTEMREQGVDLNVYSLSNVFKSFAGASALRQGLKT 235
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+ IKNG S+ ++TSL+DMYFKC K+ LAR+VF+EI++RD+VVWGAMI+G HN+
Sbjct: 236 HALAIKNGLF-SSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKR 294
Query: 250 QKEALDCFRWMRS-EGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQ 74
Q EAL FR M S EGI PNSVILT ILPV+G++ A KLGKEVH +V+KTKNY +Q F+
Sbjct: 295 QWEALGLFRTMISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKTKNYVEQPFVH 354
Query: 73 SSLIDMYSKCGDMASGRRVFYESK 2
S LID+Y KCGDM SGRRVFY SK
Sbjct: 355 SGLIDLYCKCGDMVSGRRVFYGSK 378
Score = 141 bits (356), Expect = 5e-31
Identities = 86/278 (30%), Positives = 144/278 (51%)
Frame = -3
Query: 874 KLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRT 695
+ ++ L+ + +QG+ +N + S++ S + +L G + HA NGL ++ FL+T
Sbjct: 193 RYQDVLSTFTEMREQGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFSSVFLKT 252
Query: 694 KLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMREL 515
LV MY CG + A +VFD I VE + W A++ G + R++ + + + E
Sbjct: 253 SLVDMYFKCGKVGLARRVFDEI--VERDIVVWGAMIAG-LAHNKRQWEALGLFRTMISEE 309
Query: 514 GIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKL 335
GI N ++++ AL G + HA ++K + + LID+Y KC +
Sbjct: 310 GIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKTKNYVEQPFVHSGLIDLYCKCGDMVS 369
Query: 334 ARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGE 155
R+VF R+ + W A++SG+ N +AL WM+ EG P+ V + +LPV E
Sbjct: 370 GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAE 429
Query: 154 MWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCG 41
+ A K GKE+H Y +K + + + +SL+ MYSKCG
Sbjct: 430 LRAIKQGKEIHCYALKNL-FLPNVSLVTSLMVMYSKCG 466
Score = 126 bits (316), Expect = 2e-26
Identities = 79/277 (28%), Positives = 141/277 (50%), Gaps = 1/277 (0%)
Frame = -3
Query: 841 LDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RINGLDNNDFLRTKLVHMYTSCG 665
+ ++GI N +++L + K+L G+++HAH+ + F+ + L+ +Y CG
Sbjct: 306 ISEEGIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKTKNYVEQPFVHSGLIDLYCKCG 365
Query: 664 SIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFS 485
+ +VF G + + W AL+ G G R+ + L + M++ G +V T +
Sbjct: 366 DMVSGRRVFYGSK--QRNAISWTALMSGYAANG--RFDQALRSIVWMQQEGFRPDVVTIA 421
Query: 484 SLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILD 305
+++ A A+ QG + H +KN F ++ + TSL+ MY KC + ++F+ +
Sbjct: 422 TVLPVCAELRAIKQGKEIHCYALKNLFLP-NVSLVTSLMVMYSKCGVPEYPVRLFDRLEQ 480
Query: 304 RDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEV 125
R+V W AMI + + + FR M P+SV + +L V E+ A KLGKE+
Sbjct: 481 RNVKAWTAMIDCYVETGDLRAGFEVFRSMLLSKHRPDSVTMGRVLTVCSELKALKLGKEL 540
Query: 124 HGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
HG+++K K + F+ + +I MY +CGD+ S F
Sbjct: 541 HGHILK-KEFESIPFVSARIIKMYGQCGDLRSANFSF 576
Score = 88.6 bits (218), Expect = 5e-15
Identities = 69/297 (23%), Positives = 137/297 (46%), Gaps = 6/297 (2%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A + +AL + ++ ++G + T +++L +++ G++IH + N N
Sbjct: 392 YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPN 451
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALL-----RGNVVQGGRRYREV 545
L T L+ MY+ CG E ++FD + + +V W A++ G++ G +R +
Sbjct: 452 VSLVTSLMVMYSKCGVPEYPVRLFDRLE--QRNVKAWTAMIDCYVETGDLRAGFEVFRSM 509
Query: 544 LFTYSKMRELGIELN-VYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLI 368
L SK R + + V T S +K AL G + H ++K F + + +I
Sbjct: 510 LL--SKHRPDSVTMGRVLTVCSELK------ALKLGKELHGHILKKEF-ESIPFVSARII 560
Query: 367 DMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSV 188
MY +C ++ A F+ ++ + + W A+I +G N K+A++CF M S G PN
Sbjct: 561 KMYGQCGDLRSANFSFDTVVVKGSLTWTAIIEAYGCNGRFKDAINCFEKMISRGFTPNPF 620
Query: 187 ILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRV 17
TA+L + + +++ N + S +I++ ++ G + +R+
Sbjct: 621 TFTAVLSICSQAGFVDEAYRFFNLMLRVYNLQPSKDHYSLVIEILNRFGRVKEAQRL 677
>ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g71460, chloroplastic; Flags: Precursor
gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein;
45757-47826 [Arabidopsis thaliana]
gi|332197082|gb|AEE35203.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 426 bits (1096), Expect = e-117
Identities = 210/324 (64%), Positives = 268/324 (82%), Gaps = 1/324 (0%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F E+DAFP SLPLHSKNP+ ++DIQ FARQ+ L+ ALTILDYL+++GIPVN TTFS+LL
Sbjct: 59 FRERDAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALL 118
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
+ VR KSL HG+Q+H HIRINGL++N+FLRTKLVHMYT+CGS++DA+KVFD S+
Sbjct: 119 EACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFD--ESTSSN 176
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
VY WNALLRG V+ G +RY++VL T+++MRELG++LNVY+ S++ KSFAG+SAL QG+K
Sbjct: 177 VYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT 236
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+ IKNG + S+ ++TSL+DMYFKC K+ LAR+VF+EI++RD+VVWGAMI+G HN+
Sbjct: 237 HALAIKNGLFN-SVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKR 295
Query: 250 QKEALDCFRWMRS-EGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQ 74
Q EAL FR M S E I PNSVILT ILPV+G++ A KLGKEVH +V+K+KNY +Q F+
Sbjct: 296 QWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVH 355
Query: 73 SSLIDMYSKCGDMASGRRVFYESK 2
S LID+Y KCGDMASGRRVFY SK
Sbjct: 356 SGLIDLYCKCGDMASGRRVFYGSK 379
Score = 138 bits (348), Expect = 4e-30
Identities = 85/278 (30%), Positives = 143/278 (51%)
Frame = -3
Query: 874 KLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRT 695
+ ++ L+ + + G+ +N + S++ S + +L G + HA NGL N+ FL+T
Sbjct: 194 RYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKT 253
Query: 694 KLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMREL 515
LV MY CG + A +VFD I VE + W A++ G + R++ + + + E
Sbjct: 254 SLVDMYFKCGKVGLARRVFDEI--VERDIVVWGAMIAG-LAHNKRQWEALGLFRTMISEE 310
Query: 514 GIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKL 335
I N ++++ AL G + HA ++K+ + + LID+Y KC +
Sbjct: 311 KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMAS 370
Query: 334 ARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGE 155
R+VF R+ + W A++SG+ N +AL WM+ EG P+ V + +LPV E
Sbjct: 371 GRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAE 430
Query: 154 MWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCG 41
+ A K GKE+H Y +K + + + +SL+ MYSKCG
Sbjct: 431 LRAIKQGKEIHCYALKNL-FLPNVSLVTSLMVMYSKCG 467
Score = 126 bits (317), Expect = 2e-26
Identities = 79/277 (28%), Positives = 142/277 (51%), Gaps = 1/277 (0%)
Frame = -3
Query: 841 LDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RINGLDNNDFLRTKLVHMYTSCG 665
+ ++ I N +++L + K+L G+++HAH+ + F+ + L+ +Y CG
Sbjct: 307 ISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCG 366
Query: 664 SIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFS 485
+ +VF G + + W AL+ G G R+ + L + M++ G +V T +
Sbjct: 367 DMASGRRVFYGSK--QRNAISWTALMSGYAANG--RFDQALRSIVWMQQEGFRPDVVTIA 422
Query: 484 SLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILD 305
+++ A A+ QG + H +KN F ++ + TSL+ MY KC + ++F+ +
Sbjct: 423 TVLPVCAELRAIKQGKEIHCYALKNLFLP-NVSLVTSLMVMYSKCGVPEYPIRLFDRLEQ 481
Query: 304 RDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEV 125
R+V W AMI + N + ++ FR M P+SV + +L V ++ A KLGKE+
Sbjct: 482 RNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKEL 541
Query: 124 HGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
HG+++K K + F+ + +I MY KCGD+ S F
Sbjct: 542 HGHILK-KEFESIPFVSARIIKMYGKCGDLRSANFSF 577
Score = 91.3 bits (225), Expect = 7e-16
Identities = 70/295 (23%), Positives = 135/295 (45%), Gaps = 4/295 (1%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A + +AL + ++ ++G + T +++L +++ G++IH + N N
Sbjct: 393 YAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPN 452
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTY- 533
L T L+ MY+ CG E ++FD + + +V W A++ V R +F
Sbjct: 453 VSLVTSLMVMYSKCGVPEYPIRLFDRLE--QRNVKAWTAMIDCYVENCDLRAGIEVFRLM 510
Query: 532 --SKMRELGIELN-VYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
SK R + + V T S +K AL G + H ++K F + + +I M
Sbjct: 511 LLSKHRPDSVTMGRVLTVCSDLK------ALKLGKELHGHILKKEF-ESIPFVSARIIKM 563
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC ++ A F+ + + + W A+I +G N L ++A++CF M S G PN+
Sbjct: 564 YGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTF 623
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRV 17
TA+L + + +++ N + S +I++ ++CG + +R+
Sbjct: 624 TAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
>ref|XP_003604235.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505290|gb|AES86432.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 688
Score = 426 bits (1095), Expect = e-116
Identities = 216/326 (66%), Positives = 266/326 (81%), Gaps = 4/326 (1%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
FSE+DAFP SLPLH+KNP S YKDI+ FARQ+KL EAL ILDY+D+ GIPVN TTFSSL+
Sbjct: 59 FSEEDAFPCSLPLHNKNPISIYKDIKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLI 118
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ +R+ SL+ G+QIH HIRINGL+ N FL TKLV MYTSCGS+EDA K+FD + ESS
Sbjct: 119 AACIRTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELP-DESS 177
Query: 610 VYPWNALLRGNVVQGGRR--YREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGM 437
VYPWNALLRG VV GGR+ Y +V+ TYSKMRELG+ELNVY+FSS+IKSFA + A QG+
Sbjct: 178 VYPWNALLRGTVVFGGRKKQYIDVVKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGL 237
Query: 436 KAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEI--LDRDVVVWGAMISGFG 263
K HA+LIKNG D S I++T LID+YFKC K+KLAR+VFEEI +RDVVVWG M+SGF
Sbjct: 238 KTHALLIKNGLVD-SDILRTCLIDLYFKCGKVKLARRVFEEIPERERDVVVWGTMLSGFS 296
Query: 262 HNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQL 83
HNRLQ+E L+ +WM EGI PNSVI+T +LPVIGE+ +LG+EVH +V+KTK+Y +++
Sbjct: 297 HNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAEKV 356
Query: 82 FIQSSLIDMYSKCGDMASGRRVFYES 5
+QS+LIDMY KCGD++S R VFY S
Sbjct: 357 PVQSALIDMYCKCGDLSSARAVFYSS 382
Score = 149 bits (376), Expect = 2e-33
Identities = 89/272 (32%), Positives = 142/272 (52%)
Frame = -3
Query: 829 GIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDA 650
G+ +N +FSS++ S + + G + HA + NGL ++D LRT L+ +Y CG ++ A
Sbjct: 212 GVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGKVKLA 271
Query: 649 EKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKS 470
+VF+ I E V W +L G R REVL M E GI N + ++
Sbjct: 272 RRVFEEIPERERDVVVWGTMLSG--FSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPV 329
Query: 469 FAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVV 290
G + HA ++K + +Q++LIDMY KC + AR VF +R+VV
Sbjct: 330 IGEVCKRRLGQEVHAFVLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSPERNVVC 389
Query: 289 WGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVI 110
W A++SG+ ++AL WM+ EG P+ V + +LP+ ++ A + GK++H Y +
Sbjct: 390 WTALMSGYASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYAL 449
Query: 109 KTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
K + + + SSL+ MYSKCG + R+F
Sbjct: 450 K-HWFLPNVSLSSSLVVMYSKCGVVEYSTRLF 480
Score = 122 bits (306), Expect = 3e-25
Identities = 83/293 (28%), Positives = 147/293 (50%), Gaps = 1/293 (0%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RINGLDN 713
F+ +E L + ++ ++GI N + +L + G+++HA + +
Sbjct: 295 FSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAE 354
Query: 712 NDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTY 533
+++ L+ MY CG + A VF S E +V W AL+ G G R + L
Sbjct: 355 KVPVQSALIDMYCKCGDLSSARAVF--YSSPERNVVCWTALMSGYASVG--RLEQALRAV 410
Query: 532 SKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFK 353
M++ G +V T ++++ A AL QG + HA +K+ F ++ + +SL+ MY K
Sbjct: 411 IWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLP-NVSLSSSLVVMYSK 469
Query: 352 CCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAI 173
C ++ + ++F ++ R+V+ W AMI + N EAL R M+ P+SV ++ +
Sbjct: 470 CGVVEYSTRLFGDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSKHRPDSVAMSRM 529
Query: 172 LPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
L V GE+ K GKE+HG ++K +++ F+ + LI+MY GD+ VF
Sbjct: 530 LSVCGELKLLKHGKEIHGQILK-RDFTSVHFVSAELINMYGALGDVDKANLVF 581
Score = 85.5 bits (210), Expect = 4e-14
Identities = 61/242 (25%), Positives = 112/242 (46%)
Frame = -3
Query: 889 FARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNN 710
+A +L++AL + ++ ++G + T +++L + ++L G+QIHA+ + N
Sbjct: 397 YASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPN 456
Query: 709 DFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYS 530
L + LV MY+ CG +E + ++F M + +V W A++ + ++ G Y E L
Sbjct: 457 VSLSSSLVVMYSKCGVVEYSTRLFG--DMEQRNVISWTAMI-DSYIENGHLY-EALGVIR 512
Query: 529 KMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKC 350
M+ + S ++ L G + H ++K F + LI+MY
Sbjct: 513 SMQLSKHRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFTSVHFV-SAELINMYGAL 571
Query: 349 CKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAIL 170
+ A VF + + + W A+I + +N L + A+D F MRS+ PN IL
Sbjct: 572 GDVDKANLVFSAVPVKGSMTWTALIRAYEYNELYQGAIDLFDQMRSDRFSPNPFTFEVIL 631
Query: 169 PV 164
V
Sbjct: 632 SV 633
>ref|XP_007220563.1| hypothetical protein PRUPE_ppa003304mg [Prunus persica]
gi|462417025|gb|EMJ21762.1| hypothetical protein
PRUPE_ppa003304mg [Prunus persica]
Length = 586
Score = 388 bits (996), Expect = e-105
Identities = 192/283 (67%), Positives = 237/283 (83%)
Frame = -3
Query: 850 LDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTS 671
+D ++QGIPVN TTFSSL+A+ VR++S HG+QIH HIRINGL++NDF+RTKLVHMYTS
Sbjct: 1 MDPSNQQGIPVNATTFSSLIAACVRTRSEDHGKQIHTHIRINGLESNDFIRTKLVHMYTS 60
Query: 670 CGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYT 491
GS+E A+++FD S SVY WNALLRG V+ GGRRYR+VL TY++MR LG+ELNVY+
Sbjct: 61 FGSVEHAQQLFDESS--SKSVYSWNALLRGTVISGGRRYRDVLRTYTEMRALGLELNVYS 118
Query: 490 FSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEI 311
FSS++KSFAG+SAL+QG+K HA+L+KNGF D SI+ +TSL+D+YFKC KIKLA +VFEE
Sbjct: 119 FSSVMKSFAGASALSQGLKTHALLVKNGFIDSSIV-RTSLVDLYFKCGKIKLAYRVFEEF 177
Query: 310 LDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGK 131
+RDVVVWG MI+GF HNR Q+EAL+ R M EGI PNSVILT+ILPVIG++ A KLG+
Sbjct: 178 GERDVVVWGTMIAGFAHNRRQREALEYARMMVDEGIRPNSVILTSILPVIGDVGARKLGQ 237
Query: 130 EVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVFYESK 2
EVH +V+KTK+Y KQ+FIQS LIDMY KCGDM GRRVFY SK
Sbjct: 238 EVHAFVLKTKSYSKQIFIQSGLIDMYCKCGDMDMGRRVFYHSK 280
Score = 155 bits (392), Expect = 3e-35
Identities = 93/272 (34%), Positives = 143/272 (52%)
Frame = -3
Query: 829 GIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDA 650
G+ +N +FSS++ S + +L+ G + HA + NG ++ +RT LV +Y CG I+ A
Sbjct: 111 GLELNVYSFSSVMKSFAGASALSQGLKTHALLVKNGFIDSSIVRTSLVDLYFKCGKIKLA 170
Query: 649 EKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKS 470
+VF+ E V W ++ G RR RE L M + GI N +S++
Sbjct: 171 YRVFEEFG--ERDVVVWGTMIAG--FAHNRRQREALEYARMMVDEGIRPNSVILTSILPV 226
Query: 469 FAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVV 290
A G + HA ++K I IQ+ LIDMY KC + + R+VF +R+ +
Sbjct: 227 IGDVGARKLGQEVHAFVLKTKSYSKQIFIQSGLIDMYCKCGDMDMGRRVFYHSKERNAIC 286
Query: 289 WGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVI 110
W A++SG+ N ++AL WM+ EG +P+ V + +LPV E+ K GKE+H Y +
Sbjct: 287 WTALMSGYVANGRPEQALRSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAV 346
Query: 109 KTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
K + + I SSL+ MYSKCG RR+F
Sbjct: 347 K-NCFLPNVSIISSLMVMYSKCGIFKYSRRLF 377
Score = 126 bits (316), Expect = 2e-26
Identities = 87/296 (29%), Positives = 146/296 (49%), Gaps = 1/296 (0%)
Frame = -3
Query: 898 IQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHI-RING 722
I FA + +EAL + +GI N +S+L + + G+++HA + +
Sbjct: 189 IAGFAHNRRQREALEYARMMVDEGIRPNSVILTSILPVIGDVGARKLGQEVHAFVLKTKS 248
Query: 721 LDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVL 542
F+++ L+ MY CG ++ +VF E + W AL+ G V G R + L
Sbjct: 249 YSKQIFIQSGLIDMYCKCGDMDMGRRVF--YHSKERNAICWTALMSGYVANG--RPEQAL 304
Query: 541 FTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDM 362
+ M++ G + ++ T ++++ A L +G + HA +KN F II +SL+ M
Sbjct: 305 RSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAVKNCFLPNVSII-SSLMVM 363
Query: 361 YFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVIL 182
Y KC K +R++F+ + R+V++W AMI + N EAL R M P+SV
Sbjct: 364 YSKCGIFKYSRRLFDGMEQRNVILWTAMIDSYIDNGCLYEALGVIRSMLLSKHRPDSVAT 423
Query: 181 TAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQSSLIDMYSKCGDMASGRRVF 14
IL + + KLGKE+HG V+K K++ F+ S ++ MY CG + + F
Sbjct: 424 ARILTICNGLKNLKLGKEIHGQVLK-KDFESIPFVASEIVKMYGHCGAVDHAKSAF 478
Score = 78.2 bits (191), Expect = 7e-12
Identities = 55/235 (23%), Positives = 111/235 (47%)
Frame = -3
Query: 868 KEALTILDYLDKQGIPVNPTTFSSLLASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKL 689
++AL + ++ ++G + T +++L K L G++IHA+ N N + + L
Sbjct: 301 EQALRSVIWMQQEGFKPDLVTVATVLPVCAELKDLKRGKEIHAYAVKNCFLPNVSIISSL 360
Query: 688 VHMYTSCGSIEDAEKVFDGISMVESSVYPWNALLRGNVVQGGRRYREVLFTYSKMRELGI 509
+ MY+ CG + + ++FDG M + +V W A++ + + G Y + S +
Sbjct: 361 MVMYSKCGIFKYSRRLFDG--MEQRNVILWTAMI-DSYIDNGCLYEALGVIRSMLLSKHR 417
Query: 508 ELNVYTFSSLIKSFAGSSALTQGMKAHAILIKNGFADGSIIIQTSLIDMYFKCCKIKLAR 329
+V T + ++ G L G + H ++K F + + + ++ MY C + A+
Sbjct: 418 PDSVAT-ARILTICNGLKNLKLGKEIHGQVLKKDF-ESIPFVASEIVKMYGHCGAVDHAK 475
Query: 328 QVFEEILDRDVVVWGAMISGFGHNRLQKEALDCFRWMRSEGIEPNSVILTAILPV 164
F I + + W A+I + +N + ++A+D F MRS+ PN +L +
Sbjct: 476 SAFNIIPVKGSMTWTAIIEAYAYNGMYRDAIDLFDEMRSKDFTPNHFTFQVVLSI 530
>ref|XP_007019860.1| Pentatricopeptide repeat (PPR-like) superfamily protein, putative
[Theobroma cacao] gi|508725188|gb|EOY17085.1|
Pentatricopeptide repeat (PPR-like) superfamily protein,
putative [Theobroma cacao]
Length = 431
Score = 365 bits (938), Expect = 2e-98
Identities = 193/314 (61%), Positives = 230/314 (73%)
Frame = -3
Query: 970 FSEQDAFPHSLPLHSKNPHSTYKDIQRFARQDKLKEALTILDYLDKQGIPVNPTTFSSLL 791
F E+ AFP LPLH+KNPH+ YKDIQRFARQ+KLKEAL ILDY+++QGIPVNPTTFSSLL
Sbjct: 57 FFEKYAFPSPLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVNQQGIPVNPTTFSSLL 116
Query: 790 ASVVRSKSLTHGRQIHAHIRINGLDNNDFLRTKLVHMYTSCGSIEDAEKVFDGISMVESS 611
A+ VRSKSL G+QIH HIR NGL NN+FLRTK H Y
Sbjct: 117 AACVRSKSLADGKQIHVHIRTNGLKNNEFLRTK--HAYI--------------------- 153
Query: 610 VYPWNALLRGNVVQGGRRYREVLFTYSKMRELGIELNVYTFSSLIKSFAGSSALTQGMKA 431
G V+ G +RY +VL TYS+MR L ++LNVYTFS+++KSFAG+SA QG+K
Sbjct: 154 ---------GTVISGKKRYLDVLSTYSEMRLLAVKLNVYTFSTVLKSFAGASAFRQGLKT 204
Query: 430 HAILIKNGFADGSIIIQTSLIDMYFKCCKIKLARQVFEEILDRDVVVWGAMISGFGHNRL 251
HA+LIKNGF + S+++ T LID YFKC KIKLA +VFEEI +RD+V+WGAMI+GF HNR+
Sbjct: 205 HALLIKNGFINSSMLM-TGLIDFYFKCGKIKLACRVFEEIPERDIVLWGAMIAGFAHNRI 263
Query: 250 QKEALDCFRWMRSEGIEPNSVILTAILPVIGEMWAWKLGKEVHGYVIKTKNYRKQLFIQS 71
QKEAL RWM S GI PNSVI+T ILPVIGE+WA K G EVH YV+K+ KQL IQS
Sbjct: 264 QKEALSYVRWMISAGIYPNSVIITTILPVIGEVWARKPGWEVHAYVVKS----KQLVIQS 319
Query: 70 SLIDMYSKCGDMAS 29
L+DMY KCGDM S
Sbjct: 320 GLVDMYCKCGDMDS 333