BLASTX nr result
ID: Akebia25_contig00030631
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00030631
(290 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 99 1e-23
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 101 2e-23
ref|XP_006584318.1| PREDICTED: uncharacterized protein LOC102666... 96 4e-23
gb|AAU90262.1| integrase core domain containing protein [Oryza s... 100 7e-23
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 100 1e-22
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc... 99 2e-22
gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subc... 100 1e-21
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 94 2e-21
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 97 2e-21
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 96 5e-21
gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japoni... 94 5e-21
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 96 5e-21
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 96 6e-21
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 95 6e-21
gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subc... 95 6e-21
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 98 8e-21
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 100 1e-20
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 93 2e-20
ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762... 95 2e-20
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 93 2e-20
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 99.0 bits (245), Expect(2) = 1e-23
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +1
Query: 100 GISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSP 279
GI HR+SCPY H QNG ERKHRH+VE G+ALLA +SLP+ YW +AF T+V+LINRLP+P
Sbjct: 648 GIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTP 707
Query: 280 TL 285
L
Sbjct: 708 VL 709
Score = 36.6 bits (83), Expect(2) = 1e-23
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 15 SLKVFLSFKSHVETFFNTKIRSIQSDWGWHFPS 113
+ +VFL FKS VE KI+++QSDWG + S
Sbjct: 607 AFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRS 639
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 101 bits (252), Expect(2) = 2e-23
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GISH +SCPYAH QNGS ERKHRH+VE GLALLAH+S+P +W +AFL A +LINRLPS
Sbjct: 209 IGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLAHASVPLKFWDEAFLAATYLINRLPS 268
Query: 277 PTL 285
+
Sbjct: 269 KVI 271
Score = 32.7 bits (73), Expect(2) = 2e-23
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F+ VE FN KI S+Q+DWG + L
Sbjct: 173 FHEFQQRVERLFNRKIISMQTDWGGEYEKL 202
>ref|XP_006584318.1| PREDICTED: uncharacterized protein LOC102666325 [Glycine max]
Length = 651
Score = 95.9 bits (237), Expect(2) = 4e-23
Identities = 42/64 (65%), Positives = 51/64 (79%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GI HR+ CP+ H QNG VERKHRH+VE GL+LL+HSSLPY YW AF TAV++INRLP+
Sbjct: 485 LGIIHRIICPHTHHQNGVVERKHRHIVEMGLSLLSHSSLPYHYWDHAFHTAVYIINRLPA 544
Query: 277 PTLH 288
H
Sbjct: 545 SHNH 548
Score = 37.7 bits (86), Expect(2) = 4e-23
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +3
Query: 15 SLKVFLSFKSHVETFFNTKIRSIQSDWGWHFPS 113
+L +F FK+ E NTKI++IQSDWG F S
Sbjct: 445 TLTIFKQFKALAELQLNTKIKAIQSDWGGEFRS 477
>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
Group] gi|108710062|gb|ABF97857.1| retrotransposon
protein, putative, Ty1-copia subclass, expressed [Oryza
sativa Japonica Group]
Length = 1021
Score = 99.8 bits (247), Expect(2) = 7e-23
Identities = 41/63 (65%), Positives = 52/63 (82%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GI+H +SCPYAH QNGS ERKHRH+VE GL+LLAH+S+P +W +AFLTA +LINR PS
Sbjct: 513 IGITHHVSCPYAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYLINRTPS 572
Query: 277 PTL 285
+
Sbjct: 573 KVI 575
Score = 33.1 bits (74), Expect(2) = 7e-23
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 18 LKVFLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
L+ F F+ VE FN KI ++QSDWG + L
Sbjct: 474 LQKFSEFQQLVERLFNRKIIAMQSDWGGEYEKL 506
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 100 bits (248), Expect(2) = 1e-22
Identities = 43/64 (67%), Positives = 53/64 (82%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
VGI+H +SCP+ H QNGS ERKHRH+VE GLALLA+SS+P +W +AFL+AV+LINR PS
Sbjct: 596 VGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAYSSMPLKFWGEAFLSAVYLINRTPS 655
Query: 277 PTLH 288
LH
Sbjct: 656 RVLH 659
Score = 32.0 bits (71), Expect(2) = 1e-22
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F+S VE FN KI ++Q+DWG + L
Sbjct: 560 FHEFQSLVERLFNRKIVAMQTDWGGEYQKL 589
>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2074
Score = 98.6 bits (244), Expect(2) = 2e-22
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GISH +SCPYAH QNGS ERKHRH+VE GLALL+H+S+P +W +AFL A +LINR PS
Sbjct: 1556 IGISHHVSCPYAHQQNGSAERKHRHIVEVGLALLSHASMPLKFWDEAFLAAAYLINRTPS 1615
Score = 33.1 bits (74), Expect(2) = 2e-22
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F+ VE FN KI S+Q+DWG + L
Sbjct: 1520 FQEFQQRVERLFNRKIISMQTDWGGEYEKL 1549
>gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1001
Score = 100 bits (248), Expect(2) = 1e-21
Identities = 41/64 (64%), Positives = 54/64 (84%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GISHR+SCP+AH QNG+ ERKHRH+VE GLALLAH+S+P +W +AF TA +LINR P+
Sbjct: 337 IGISHRVSCPHAHQQNGAAERKHRHIVEVGLALLAHASMPLKFWDEAFCTATYLINRTPA 396
Query: 277 PTLH 288
T++
Sbjct: 397 KTIN 400
Score = 28.9 bits (63), Expect(2) = 1e-21
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 18 LKVFLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
L+ F F S VE + KI ++Q+DWG + L
Sbjct: 298 LQKFQEFLSFVERLLDRKIIAMQTDWGGEYEKL 330
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 94.0 bits (232), Expect(2) = 2e-21
Identities = 43/62 (69%), Positives = 48/62 (77%)
Frame = +1
Query: 100 GISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPSP 279
GI HRLSCP+ QNG +ERKHRH+VE GL LLA +SLP YW DAF TAVFLINRLP+
Sbjct: 460 GIIHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKYWPDAFSTAVFLINRLPTE 519
Query: 280 TL 285
L
Sbjct: 520 VL 521
Score = 34.3 bits (77), Expect(2) = 2e-21
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 21 KVFLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
+ FL FK+ E F K+++ Q+DWG F SL
Sbjct: 421 EAFLMFKAQAELQFGCKLKTFQTDWGGEFRSL 452
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 96.7 bits (239), Expect(2) = 2e-21
Identities = 46/66 (69%), Positives = 50/66 (75%)
Frame = +1
Query: 88 LIGVGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINR 267
L VGI+HR SCPY QNG VERKHRHVVETGLALL+H+SLP YW AF T FLINR
Sbjct: 627 LQAVGIAHRFSCPYNSXQNGRVERKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINR 686
Query: 268 LPSPTL 285
+PS L
Sbjct: 687 MPSKVL 692
Score = 31.2 bits (69), Expect(2) = 2e-21
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +3
Query: 15 SLKVFLSFKSHVETFFNTKIRSIQSDWGWHFPS 113
+L +F FK +E F+TKI+ +QSD G F S
Sbjct: 590 ALPIFKXFKLQMENQFDTKIKCLQSDNGGEFRS 622
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 95.9 bits (237), Expect(2) = 5e-21
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GISH +SCP+AH QNGS ERKHRH+VE GL+LLAH+S+P +W +AFL A +LINR P+
Sbjct: 445 IGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPT 504
Query: 277 PTLH 288
L+
Sbjct: 505 KILN 508
Score = 30.8 bits (68), Expect(2) = 5e-21
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F+S VE F+ KI ++Q+DWG + L
Sbjct: 409 FHEFQSLVERLFDRKILAVQTDWGGEYQRL 438
>gb|AAN06870.1| Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108706314|gb|ABF94109.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1247
Score = 94.0 bits (232), Expect(2) = 5e-21
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GI+H +SCP+ H QNGS ERKHRH+VE GLALLA+SS+P +W +AF +AV+LINR PS
Sbjct: 396 IGITHHVSCPHTHQQNGSAERKHRHIVEMGLALLAYSSMPLKFWDEAFTSAVYLINRTPS 455
Query: 277 PTL 285
L
Sbjct: 456 RLL 458
Score = 32.7 bits (73), Expect(2) = 5e-21
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 18 LKVFLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
++ F F++ VE FN KI ++QSDWG + L
Sbjct: 357 IQKFHEFQALVERLFNRKILAMQSDWGGEYEKL 389
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 95.9 bits (237), Expect(2) = 5e-21
Identities = 40/64 (62%), Positives = 52/64 (81%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GISH +SCP+AH QNGS ERKHRH+VE GL+LLAH+S+P +W +AFL A +LINR P+
Sbjct: 445 IGISHLVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPT 504
Query: 277 PTLH 288
L+
Sbjct: 505 KILN 508
Score = 30.8 bits (68), Expect(2) = 5e-21
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F+S VE F+ KI ++Q+DWG + L
Sbjct: 409 FHEFQSLVERLFDRKILAVQTDWGGEYQRL 438
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 95.9 bits (237), Expect(2) = 6e-21
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GI H++SCP+ H QNG+ ERKHRH+VE GLALLA SS+P YW AFL AV+LINR PS
Sbjct: 598 IGIHHQVSCPHTHQQNGAAERKHRHIVEVGLALLAQSSMPLKYWDHAFLAAVYLINRTPS 657
Query: 277 PTL 285
T+
Sbjct: 658 KTI 660
Score = 30.4 bits (67), Expect(2) = 6e-21
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 21 KVFLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
K F F+ VE F KI + QSDWG + L
Sbjct: 560 KSFCEFQHLVERMFGRKIIAFQSDWGGEYEKL 591
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 94.7 bits (234), Expect(2) = 6e-21
Identities = 38/59 (64%), Positives = 51/59 (86%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLP 273
+GI+H++SCP+ H QNG+VERKHRH+VE GL+LLAH+S+P +W +AFL A +LINRLP
Sbjct: 586 IGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLP 644
Score = 31.6 bits (70), Expect(2) = 6e-21
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F+S VE FN KI +Q+DWG + L
Sbjct: 550 FKEFQSMVERQFNRKILGMQTDWGGEYQKL 579
>gb|ABF99203.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1177
Score = 94.7 bits (234), Expect(2) = 6e-21
Identities = 38/59 (64%), Positives = 51/59 (86%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLP 273
+GI+H++SCP+ H QNG+VERKHRH+VE GL+LLAH+S+P +W +AFL A +LINRLP
Sbjct: 475 IGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASMPLKFWDEAFLAATYLINRLP 533
Score = 31.6 bits (70), Expect(2) = 6e-21
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F+S VE FN KI +Q+DWG + L
Sbjct: 439 FKEFQSMVERQFNRKILGMQTDWGGEYQKL 468
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 97.8 bits (242), Expect(2) = 8e-21
Identities = 40/63 (63%), Positives = 52/63 (82%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GISH +SCP+ H QNG+VERKHRH+VE GL+LLAH+S+P +W +AFL A +LINRLPS
Sbjct: 585 IGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASMPLKFWDEAFLAATYLINRLPS 644
Query: 277 PTL 285
+
Sbjct: 645 KVI 647
Score = 28.1 bits (61), Expect(2) = 8e-21
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F+ VE F+ KI S+Q+DWG + L
Sbjct: 549 FHEFQKLVERQFDRKILSMQTDWGGEYLKL 578
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 99.8 bits (247), Expect(2) = 1e-20
Identities = 41/64 (64%), Positives = 52/64 (81%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GISH +SCP+AH QNGS ERKHRH+VE GL+LLAH+S+P +W +AFLTA +LINR P
Sbjct: 31 IGISHHVSCPHAHQQNGSAERKHRHIVEVGLSLLAHASMPLKFWDEAFLTATYLINRTPM 90
Query: 277 PTLH 288
+H
Sbjct: 91 KIIH 94
Score = 25.4 bits (54), Expect(2) = 1e-20
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 51 ETFFNTKIRSIQSDWGWHFPSL 116
E + KI+S+Q+DWG + L
Sbjct: 3 ERLLDRKIKSVQTDWGGEYQRL 24
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 92.8 bits (229), Expect(2) = 2e-20
Identities = 38/64 (59%), Positives = 49/64 (76%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GISH +SCPYAH QNGS ERKHRH++E L LLAH+S+P +W +A L A +LINR PS
Sbjct: 560 IGISHHVSCPYAHQQNGSAERKHRHLIEVALTLLAHASMPIKFWDEAVLAAAYLINRTPS 619
Query: 277 PTLH 288
++
Sbjct: 620 KVIN 623
Score = 32.0 bits (71), Expect(2) = 2e-20
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F++ VE FF KI ++Q+DWG + L
Sbjct: 524 FQEFQTLVERFFGHKILAVQTDWGGEYQKL 553
>ref|XP_004967136.1| PREDICTED: uncharacterized protein LOC101762311 [Setaria italica]
Length = 866
Score = 95.1 bits (235), Expect(2) = 2e-20
Identities = 39/64 (60%), Positives = 52/64 (81%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GISHR+SCP+ H QNG+ ERKHRH++E GLALLA++S+P +W AFLTA +LIN LPS
Sbjct: 510 IGISHRVSCPHTHQQNGAAERKHRHIIEVGLALLANASMPLKFWDQAFLTATYLINLLPS 569
Query: 277 PTLH 288
++
Sbjct: 570 KVIN 573
Score = 29.6 bits (65), Expect(2) = 2e-20
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 21 KVFLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
+VF F+ VE + KI IQSDWG + L
Sbjct: 472 RVFQEFQQLVERKLSKKILCIQSDWGGEYEKL 503
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 92.8 bits (229), Expect(2) = 2e-20
Identities = 37/63 (58%), Positives = 51/63 (80%)
Frame = +1
Query: 97 VGISHRLSCPYAHSQNGSVERKHRHVVETGLALLAHSSLPYSYWSDAFLTAVFLINRLPS 276
+GI+H +SCP+ H QNGS ERKHRH+VE GL+LLAH+SLP +W +A+ + V+LINR+P+
Sbjct: 427 IGITHHVSCPHTHQQNGSAERKHRHIVEVGLSLLAHASLPLKFWDEAYQSGVYLINRMPT 486
Query: 277 PTL 285
L
Sbjct: 487 KVL 489
Score = 31.6 bits (70), Expect(2) = 2e-20
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +3
Query: 27 FLSFKSHVETFFNTKIRSIQSDWGWHFPSL 116
F F+ VE FN KI S+Q+DWG + L
Sbjct: 391 FQEFQCLVERMFNRKIISMQTDWGGEYQKL 420