BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00029798
         (1636 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   629   e-177
emb|CBI21810.3| unnamed protein product [Vitis vinifera]              624   e-176
ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phas...   624   e-176
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...   617   e-174
ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prun...   615   e-173
gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus not...   614   e-173
ref|XP_007022303.1| RecA DNA recombination family protein isofor...   612   e-172
ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1...   608   e-171
ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa...   606   e-171
ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1...   606   e-170
ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1...   605   e-170
ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1...   605   e-170
ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citr...   605   e-170
ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1...   600   e-169
ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [S...   599   e-168
ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [A...   598   e-168
ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG3...   598   e-168
ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group] g...   598   e-168
ref|XP_003562019.1| PREDICTED: DNA repair protein recA homolog 1...   595   e-167
ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1...   592   e-166

>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Vitis vinifera]
          Length = 415

 Score =  629 bits (1622), Expect = e-177
 Identities = 321/405 (79%), Positives = 349/405 (86%), Gaps = 7/405 (1%)
 Frame = +1

Query: 160  HFP-----PLRFPISRLRSWPVFNGGK--QARVHCEFEAKGNGALSGETDPRFIDRQKAL 318
            HFP     P  FP S L   P   G K  Q R+ CEFE K NGALS + DPRF+DRQKAL
Sbjct: 12   HFPLKTLLPSAFPSSSL---PPHMGAKRQQMRLRCEFEVKVNGALSSDPDPRFLDRQKAL 68

Query: 319  EAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSG 498
            EAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD+ALGGGLPKGRIVEI+GPESSG
Sbjct: 69   EAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGPESSG 128

Query: 499  KTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADR 678
            KTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPD+GEMALE ADR
Sbjct: 129  KTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALEIADR 188

Query: 679  MCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIF 858
            MCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIF
Sbjct: 189  MCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIF 248

Query: 859  LNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXX 1038
            LNQIRYKIGV+YGNPEVTSGGIALKFFASLRLEIR +GKIKS KGDEDIG          
Sbjct: 249  LNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKS 308

Query: 1039 XXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYL 1218
                PYKQAEFEIIFGEGVSKLGCILDCAE+MD++VKKGSWYSYGD RLGQGRD+ALQYL
Sbjct: 309  KVSRPYKQAEFEIIFGEGVSKLGCILDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYL 368

Query: 1219 REDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1353
            RE+PL+C +IEK+VR  MAE  GQ+G  +++ SP    ++ + +E
Sbjct: 369  RENPLVCHEIEKIVRPMMAEGIGQLGAPHVRLSPTSPEDEDILEE 413


>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  624 bits (1610), Expect = e-176
 Identities = 310/377 (82%), Positives = 339/377 (89%)
 Frame = +1

Query: 223  KQARVHCEFEAKGNGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVE 402
            +Q R+ CEFE K NGALS + DPRF+DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVE
Sbjct: 6    QQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVE 65

Query: 403  TFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 582
            TFPSGCLTLD+ALGGGLPKGRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF
Sbjct: 66   TFPSGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAF 125

Query: 583  DPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEI 762
            DPAYS+ALGVD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEI
Sbjct: 126  DPAYSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEI 185

Query: 763  GMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFA 942
            GMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFA
Sbjct: 186  GMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFA 245

Query: 943  SLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDC 1122
            SLRLEIR +GKIKS KGDEDIG              PYKQAEFEIIFGEGVSKLGCILDC
Sbjct: 246  SLRLEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDC 305

Query: 1123 AEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLS 1302
            AE+MD++VKKGSWYSYGD RLGQGRD+ALQYLRE+PL+C +IEK+VR  MAE  GQ+G  
Sbjct: 306  AELMDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAP 365

Query: 1303 YMKQSPLLENEDQVFDE 1353
            +++ SP    ++ + +E
Sbjct: 366  HVRLSPTSPEDEDILEE 382


>ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phaseolus vulgaris]
            gi|561006319|gb|ESW05313.1| hypothetical protein
            PHAVU_011G169700g [Phaseolus vulgaris]
          Length = 415

 Score =  624 bits (1608), Expect = e-176
 Identities = 323/421 (76%), Positives = 352/421 (83%), Gaps = 2/421 (0%)
 Frame = +1

Query: 97   MEAFFPLKTHHCF-HFQTHPTLHFP-PLRFPISRLRSWPVFNGGKQARVHCEFEAKGNGA 270
            M+  FPLK H          +L FP PLRF     R+   F   K A + CE E + NGA
Sbjct: 1    MDLMFPLKPHSVILKAPLFSSLLFPLPLRF-----RAVTAF---KHANIQCELEGRPNGA 52

Query: 271  LSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGG 450
            LSG+ DPRFIDRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGG
Sbjct: 53   LSGDFDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGG 112

Query: 451  LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLI 630
            LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLI
Sbjct: 113  LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLI 172

Query: 631  VCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 810
            VCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL
Sbjct: 173  VCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 232

Query: 811  RKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVK 990
            RKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASLRLE+R  GKIKS K
Sbjct: 233  RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPAGKIKSAK 292

Query: 991  GDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSY 1170
            GDE+IG              PYK AEFEIIFGEG+SKLGCILDCAEM DI++KKGSWYSY
Sbjct: 293  GDEEIGLKVRLRVQKSKVSRPYKLAEFEIIFGEGISKLGCILDCAEMTDIVLKKGSWYSY 352

Query: 1171 GDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFD 1350
            GD RLGQGRDKA+QYL+E+  L  +IEKVVRS + + + Q  L++MK SP+L  +D +F+
Sbjct: 353  GDHRLGQGRDKAIQYLKENTNLLEEIEKVVRSSLVDGSNQASLAHMKNSPVLHEDDDIFE 412

Query: 1351 E 1353
            E
Sbjct: 413  E 413


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Glycine max]
          Length = 414

 Score =  617 bits (1590), Expect = e-174
 Identities = 321/422 (76%), Positives = 351/422 (83%), Gaps = 2/422 (0%)
 Frame = +1

Query: 97   MEAFFPLKTHHCFHFQT--HPTLHFPPLRFPISRLRSWPVFNGGKQARVHCEFEAKGNGA 270
            M+  FPLK H C   +     +L FP   FP+ R R+   F   K A + CE E + NGA
Sbjct: 1    MDLMFPLKPH-CVILKAPLSSSLLFP---FPL-RFRAVTAF---KHANIQCELEGRPNGA 52

Query: 271  LSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGG 450
            LSG+ DPRFIDRQKALEAAMNDINN+FGKGSVTRLGSAGGALVETFPSGCLTLD ALGGG
Sbjct: 53   LSGDFDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGG 112

Query: 451  LPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLI 630
            LPKGRI+EI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLI
Sbjct: 113  LPKGRIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLI 172

Query: 631  VCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 810
            VCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL
Sbjct: 173  VCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQAL 232

Query: 811  RKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVK 990
            RKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASLRLE+R  GKIKS K
Sbjct: 233  RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIKSAK 292

Query: 991  GDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSY 1170
            GDE+IG              PYK AEFEIIFGEG+SKLGCILDCAEM DI+ KKGSWYSY
Sbjct: 293  GDEEIGLKVRLRVQKSKVSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYSY 352

Query: 1171 GDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFD 1350
            GD RLGQGRDKA+QYL+E+  L  +IEKVVRS + + T Q    +MK S +L  +D +F+
Sbjct: 353  GDHRLGQGRDKAIQYLKENTHLLEEIEKVVRSSLIDGTNQTSPVHMKNSSVLHQDDDMFE 412

Query: 1351 ER 1356
            ER
Sbjct: 413  ER 414


>ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prunus persica]
            gi|462411678|gb|EMJ16727.1| hypothetical protein
            PRUPE_ppa007080mg [Prunus persica]
          Length = 383

 Score =  615 bits (1585), Expect = e-173
 Identities = 308/374 (82%), Positives = 334/374 (89%)
 Frame = +1

Query: 232  RVHCEFEAKGNGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFP 411
            RV CE +AK NGALS ++DPRFIDRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFP
Sbjct: 8    RVRCELQAKVNGALSADSDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP 67

Query: 412  SGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 591
            SGCLTLD ALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA
Sbjct: 68   SGCLTLDLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 127

Query: 592  YSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 771
            YS+ALGVD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 128  YSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 187

Query: 772  QIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLR 951
            Q+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+R
Sbjct: 188  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 247

Query: 952  LEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEM 1131
            LEIRS GKIKSVKGDE+IG              PYKQAEFEI+FGEGV KLGCILDCAE 
Sbjct: 248  LEIRSTGKIKSVKGDEEIGVRVRVRVQKSKVSRPYKQAEFEIVFGEGVGKLGCILDCAET 307

Query: 1132 MDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMK 1311
            MD++VKKGSWYSYGD RLGQGRDKALQYLRE+PLL  +IEK+VRS + + TGQVG  +  
Sbjct: 308  MDVVVKKGSWYSYGDHRLGQGRDKALQYLRENPLLLDEIEKIVRSMITDGTGQVGTLHTS 367

Query: 1312 QSPLLENEDQVFDE 1353
               + + ++  F++
Sbjct: 368  NLQIPQQDEDDFED 381


>gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus notabilis]
          Length = 438

 Score =  614 bits (1583), Expect = e-173
 Identities = 324/437 (74%), Positives = 353/437 (80%), Gaps = 18/437 (4%)
 Frame = +1

Query: 97   MEAFFPLK--THHCFHFQTHPTLHFPPLRF-------PISRLRSWPVFNGGKQARVHCEF 249
            ME  FP    T H F   T  T   PP  +         S LR   V +     R+ CEF
Sbjct: 1    MELLFPPSKLTPH-FRSSTSTTRFLPPSLYLPSSSSSSASSLRRRSVSSPSAIRRIRCEF 59

Query: 250  EAKGNGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTL 429
            +AK NGAL GE DPRF+DRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTL
Sbjct: 60   DAKINGALPGEFDPRFLDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTL 119

Query: 430  DYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALG 609
            D ALGGGLP+GRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALG
Sbjct: 120  DLALGGGLPRGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALG 179

Query: 610  VDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQA 789
            VD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQA
Sbjct: 180  VDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQA 239

Query: 790  RLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSM 969
            RLMSQALRKMSGNASKA CTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS 
Sbjct: 240  RLMSQALRKMSGNASKACCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRST 299

Query: 970  GKIKSVKGDEDIG---------XXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDC 1122
            GKIKSVKGDE+IG                       PYKQAEFEIIFGEGVSKLGC+LDC
Sbjct: 300  GKIKSVKGDEEIGLRVRVRIQKSKKGINKFPSQVSRPYKQAEFEIIFGEGVSKLGCVLDC 359

Query: 1123 AEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLS 1302
            AE+MD+I KKGSWYSYGD RLGQGRD++LQYLRE+PLL  +IEK+VRSK+AE TGQ G  
Sbjct: 360  AEIMDVIAKKGSWYSYGDHRLGQGRDRSLQYLRENPLLLDEIEKIVRSKLAEGTGQTGFL 419

Query: 1303 YMKQSPLLENEDQVFDE 1353
              +   L + ++ V++E
Sbjct: 420  QPRSLSLPQEDEDVYEE 436


>ref|XP_007022303.1| RecA DNA recombination family protein isoform 1 [Theobroma cacao]
            gi|508721931|gb|EOY13828.1| RecA DNA recombination family
            protein isoform 1 [Theobroma cacao]
          Length = 485

 Score =  612 bits (1578), Expect = e-172
 Identities = 318/423 (75%), Positives = 353/423 (83%), Gaps = 7/423 (1%)
 Frame = +1

Query: 106  FFP--LKTHHCF-----HFQTHPTLHFPPLRFPISRLRSWPVFNGGKQARVHCEFEAKGN 264
            FFP  LK HH +     HF+  P L    L  P++ ++        +  +VHCEFE + N
Sbjct: 71   FFPFKLKLHHRYLPLQNHFRQRPPLTSSHL--PLAAVKK-------RLRKVHCEFEPRVN 121

Query: 265  GALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALG 444
            GALS  +D RF+DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALG
Sbjct: 122  GALSPNSDSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALG 181

Query: 445  GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIEN 624
            GGLPKGRIVE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+EN
Sbjct: 182  GGLPKGRIVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVEN 241

Query: 625  LIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQ 804
            LIVCQPDNGEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQ
Sbjct: 242  LIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQ 301

Query: 805  ALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKS 984
            ALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIR  GKIKS
Sbjct: 302  ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPSGKIKS 361

Query: 985  VKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWY 1164
            VKGDEDIG              PYKQAEFEIIFGEGVSKLGCILDCAEMMD++VKKGSWY
Sbjct: 362  VKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEMMDVVVKKGSWY 421

Query: 1165 SYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQV 1344
            SYG+ RLGQGRDKALQYLR++P+L  +IEK+VRS MA+ T  +  + +K   L   ++  
Sbjct: 422  SYGEHRLGQGRDKALQYLRDNPVLHGEIEKIVRSMMADGTLHMSSAPVKSLSLPPQDENN 481

Query: 1345 FDE 1353
            ++E
Sbjct: 482  YEE 484


>ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Setaria italica]
          Length = 417

 Score =  608 bits (1568), Expect = e-171
 Identities = 310/402 (77%), Positives = 343/402 (85%), Gaps = 5/402 (1%)
 Frame = +1

Query: 166  PPLRFPISRLRSWPVFNGG----KQARVHCEFEAKG-NGALSGETDPRFIDRQKALEAAM 330
            P +   I R R  P  + G    +  R+ CEF A G NGALSGE DPR +DRQKAL+AAM
Sbjct: 17   PSISTRIRRRRPAPRASAGGVTARARRLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAM 76

Query: 331  NDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTL 510
            +DINNSFGKGSVTRLGSAGGA VETFPSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTL
Sbjct: 77   SDINNSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTL 136

Query: 511  ALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRS 690
            ALHAIAE+QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRS
Sbjct: 137  ALHAIAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRS 196

Query: 691  GAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQI 870
            GAIDLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQI
Sbjct: 197  GAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQI 256

Query: 871  RYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXX 1050
            RYKIGVFYGNPEVTSGGIALKFFAS+RLEIRS GKIKS KGDED+G              
Sbjct: 257  RYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSAKGDEDVGVKVRVRVQKSKVSR 316

Query: 1051 PYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDP 1230
            PYKQAEFEIIFGEGVSKLGC+LDCAE+M+++ KKGSWYSY D RLGQGR+KALQYLRE+P
Sbjct: 317  PYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKDMRLGQGREKALQYLRENP 376

Query: 1231 LLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDER 1356
             +C +IEKVVR+ + E T  + L    QS L E +DQV+DE+
Sbjct: 377  TICDEIEKVVRAMIPEGTRHMSLLAFGQSSLTE-DDQVYDEQ 417


>ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa]
            gi|550349661|gb|ERP67037.1| DNA repair protein recA
            [Populus trichocarpa]
          Length = 427

 Score =  606 bits (1563), Expect = e-171
 Identities = 314/418 (75%), Positives = 347/418 (83%), Gaps = 4/418 (0%)
 Frame = +1

Query: 112  PLKTHHCFHFQTHPTLHFPPLRFPISRL---RSWPVFNGGKQARVHCEFEAKGNGA-LSG 279
            P+ T H F  ++ P     PL F  SR+    S       K   + CEF++K NG+ LS 
Sbjct: 9    PITTIHHFPSKSTPFHPSLPLYFQFSRVCFKTSHFAAVKKKPKEIRCEFDSKVNGSPLSS 68

Query: 280  ETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPK 459
            + D RF+D+QKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLD+ALGGGLPK
Sbjct: 69   DLDARFLDKQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPK 128

Query: 460  GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQ 639
            GRIVEIFGPESSGKTTLALHAIAEVQK GG+AMLVDAEHAFDPAYS+ALGVD+ENLIVCQ
Sbjct: 129  GRIVEIFGPESSGKTTLALHAIAEVQKFGGHAMLVDAEHAFDPAYSKALGVDVENLIVCQ 188

Query: 640  PDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 819
            PDNGEMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM
Sbjct: 189  PDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKM 248

Query: 820  SGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDE 999
            SGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS GKIKSVKGDE
Sbjct: 249  SGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDE 308

Query: 1000 DIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQ 1179
            D+G              PYKQAEFEIIFGEGVS+LGCILDCAEMMD++VKKGSWYSYGD 
Sbjct: 309  DVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSQLGCILDCAEMMDVVVKKGSWYSYGDH 368

Query: 1180 RLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1353
            RLGQGRDKALQYLR++P L  +IEK VRS M + T  +G    +  P+   ++ V+D+
Sbjct: 369  RLGQGRDKALQYLRDNPHLQEEIEKKVRSTMTDGTVNMGTPQARNMPVPLQDENVYDD 426


>ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Fragaria vesca subsp. vesca]
          Length = 418

 Score =  606 bits (1562), Expect = e-170
 Identities = 314/420 (74%), Positives = 345/420 (82%), Gaps = 1/420 (0%)
 Frame = +1

Query: 97   MEAFFPLKTHHCFHFQTHPTLHFPPLRFPISRLRSWPVFNGGKQARVHCEFEAKGNGALS 276
            M   F   +    H+ + PT    PL F    L            RV  E + K NGALS
Sbjct: 1    MGLLFRTSSSSMTHYMSTPT----PLLFHSCSLPQRFNLQSMAAKRVRSELQVKVNGALS 56

Query: 277  -GETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGL 453
              ++D  F+DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGL
Sbjct: 57   TADSDSLFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGL 116

Query: 454  PKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIV 633
            PKGRIVEIFGPESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYS+ALGVD+ENLIV
Sbjct: 117  PKGRIVEIFGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKALGVDVENLIV 176

Query: 634  CQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALR 813
            CQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALR
Sbjct: 177  CQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALR 236

Query: 814  KMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKG 993
            KMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS GKIKSVKG
Sbjct: 237  KMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKG 296

Query: 994  DEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYG 1173
            DE+IG              PYKQAEFEI+FGEGVSKLGCILDCAEMMD+IVKKGSWYSYG
Sbjct: 297  DEEIGVRVRVRVQKSKVSRPYKQAEFEIVFGEGVSKLGCILDCAEMMDVIVKKGSWYSYG 356

Query: 1174 DQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1353
            D RLGQGRDK+LQYLRE+P+L  +IEK+VRS M + TGQVG  + +  P+   ++  F++
Sbjct: 357  DHRLGQGRDKSLQYLRENPVLLDEIEKIVRSTMTDATGQVGSFHTRHLPVTHQDEDDFED 416


>ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Citrus sinensis]
          Length = 440

 Score =  605 bits (1561), Expect = e-170
 Identities = 312/415 (75%), Positives = 344/415 (82%)
 Frame = +1

Query: 109  FPLKTHHCFHFQTHPTLHFPPLRFPISRLRSWPVFNGGKQARVHCEFEAKGNGALSGETD 288
            F +KTH C    +   LH    R       S       +  ++ CEF+ K NG  S   D
Sbjct: 26   FNMKTHSCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGD 85

Query: 289  PRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRI 468
             RF+DRQ+AL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRI
Sbjct: 86   SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRI 145

Query: 469  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDN 648
            VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPDN
Sbjct: 146  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDN 205

Query: 649  GEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 828
            GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN
Sbjct: 206  GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265

Query: 829  ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIG 1008
            ASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS GKIKSVKGDED+G
Sbjct: 266  ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325

Query: 1009 XXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLG 1188
                          PYKQAEFEIIFGEGVSKLGC+LDCAEMMDI+V+KG+WYSYGDQRLG
Sbjct: 326  VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385

Query: 1189 QGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1353
            QGRDKALQYLR++PLL  +IEKVVRS M++ +   G S+++   L   ++ + +E
Sbjct: 386  QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQG-SFLRNVSLPNQDENILEE 439


>ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            isoform 1 [Brachypodium distachyon]
          Length = 412

 Score =  605 bits (1561), Expect = e-170
 Identities = 307/397 (77%), Positives = 338/397 (85%), Gaps = 1/397 (0%)
 Frame = +1

Query: 166  PPLRFPISRLRSWPVFNGGKQARVHCEFEAK-GNGALSGETDPRFIDRQKALEAAMNDIN 342
            P  R  +S  R+      G+  R+ CEF A  GNGALSGE DPR IDRQKAL+AAMNDIN
Sbjct: 16   PRPRRRVSATRASASGTTGRGRRLRCEFVASVGNGALSGEDDPRLIDRQKALDAAMNDIN 75

Query: 343  NSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHA 522
            NSFGKGSVTRLGSAGGA VETFPSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHA
Sbjct: 76   NSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHA 135

Query: 523  IAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAID 702
            IAE+QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAID
Sbjct: 136  IAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAID 195

Query: 703  LICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKI 882
            LIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKI
Sbjct: 196  LICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKI 255

Query: 883  GVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQ 1062
            GVFYGNPEVTSGGIALKFFAS+RLEIR +GKIKS KGDED+G              PYKQ
Sbjct: 256  GVFYGNPEVTSGGIALKFFASVRLEIRHIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQ 315

Query: 1063 AEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCS 1242
            AEFEI+FGEGVSKLGCILDCAE+M+++ KKGSWYSY D RLGQGR+KALQYLRE P +C 
Sbjct: 316  AEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICD 375

Query: 1243 DIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1353
            +IEKVVR+ + E T  + L    QS     E++V+DE
Sbjct: 376  EIEKVVRAMIPEGTRHMTLLAFGQSSSPTEEEEVYDE 412


>ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citrus clementina]
            gi|557543284|gb|ESR54262.1| hypothetical protein
            CICLE_v10020181mg [Citrus clementina]
          Length = 440

 Score =  605 bits (1559), Expect = e-170
 Identities = 312/415 (75%), Positives = 344/415 (82%)
 Frame = +1

Query: 109  FPLKTHHCFHFQTHPTLHFPPLRFPISRLRSWPVFNGGKQARVHCEFEAKGNGALSGETD 288
            F +KTH C    +   LH    R       S       +  ++ CEF+ K NG  S   D
Sbjct: 26   FNMKTHLCLLSISSSPLHCQSSRSRFFTASSKLSAARKRDKKISCEFDGKVNGFSSDSGD 85

Query: 289  PRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRI 468
             RF+DRQ+AL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLPKGRI
Sbjct: 86   SRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRI 145

Query: 469  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDN 648
            VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YS+ALGVD+ENLIVCQPDN
Sbjct: 146  VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPDN 205

Query: 649  GEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 828
            GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN
Sbjct: 206  GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 265

Query: 829  ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIG 1008
            ASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIRS GKIKSVKGDED+G
Sbjct: 266  ASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSVKGDEDVG 325

Query: 1009 XXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLG 1188
                          PYKQAEFEIIFGEGVSKLGC+LDCAEMMDI+V+KG+WYSYGDQRLG
Sbjct: 326  VRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLG 385

Query: 1189 QGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1353
            QGRDKALQYLR++PLL  +IEKVVRS M++ +   G S+++   L   E+ + +E
Sbjct: 386  QGRDKALQYLRDNPLLQEEIEKVVRSMMSDGSVHQG-SFLRNVSLPNQEENILEE 439


>ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like,
            partial [Oryza brachyantha]
          Length = 371

 Score =  600 bits (1547), Expect = e-169
 Identities = 303/372 (81%), Positives = 328/372 (88%), Gaps = 1/372 (0%)
 Frame = +1

Query: 241  CEFEAKG-NGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSG 417
            CEF A G NGALSGE DPR IDRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETFPSG
Sbjct: 1    CEFVAGGGNGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETFPSG 60

Query: 418  CLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 597
            CLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS
Sbjct: 61   CLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS 120

Query: 598  RALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQI 777
            +ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQ+
Sbjct: 121  KALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQM 180

Query: 778  GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLE 957
            GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFFAS+RLE
Sbjct: 181  GLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLE 240

Query: 958  IRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMD 1137
            IR +GKIKS KGDED+G              PYKQAEFEIIFGEGVSKLGC+LDCAE+M+
Sbjct: 241  IRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELME 300

Query: 1138 IIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQS 1317
            ++ KKGSWYSY D RLGQGR+KALQYLRE P +C +IEK VR+ + E T    L    QS
Sbjct: 301  VVAKKGSWYSYKDMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGTRHESLLAFGQS 360

Query: 1318 PLLENEDQVFDE 1353
             L E E+QV+DE
Sbjct: 361  SLTE-EEQVYDE 371


>ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
            gi|241920620|gb|EER93764.1| hypothetical protein
            SORBIDRAFT_01g013810 [Sorghum bicolor]
          Length = 415

 Score =  599 bits (1545), Expect = e-168
 Identities = 302/376 (80%), Positives = 332/376 (88%), Gaps = 1/376 (0%)
 Frame = +1

Query: 232  RVHCEFEAKG-NGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF 408
            R+ CEF A G NGALSGE DPR +DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETF
Sbjct: 41   RLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETF 100

Query: 409  PSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 588
            PSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP
Sbjct: 101  PSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 160

Query: 589  AYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGM 768
            AYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGM
Sbjct: 161  AYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGM 220

Query: 769  QQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASL 948
            QQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFFAS+
Sbjct: 221  QQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASV 280

Query: 949  RLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAE 1128
            RLEIR +GKIKS KGDED+G              PYKQAEFEIIFGEGVSKLGC+LDCAE
Sbjct: 281  RLEIRPIGKIKSPKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAE 340

Query: 1129 MMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYM 1308
            +MD++ KKGSWYSY D RLGQGR+KALQYLRE P +C +IEKVVR+ + E +  + L   
Sbjct: 341  LMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICDEIEKVVRAMIPEGSRHMSLLAF 400

Query: 1309 KQSPLLENEDQVFDER 1356
             Q+   E+E QV+DE+
Sbjct: 401  GQTSSTEDE-QVYDEQ 415


>ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [Amborella trichopoda]
            gi|548838911|gb|ERM99246.1| hypothetical protein
            AMTR_s00092p00136000 [Amborella trichopoda]
          Length = 406

 Score =  598 bits (1542), Expect = e-168
 Identities = 310/399 (77%), Positives = 338/399 (84%), Gaps = 2/399 (0%)
 Frame = +1

Query: 163  FPPLRFPI--SRLRSWPVFNGGKQARVHCEFEAKGNGALSGETDPRFIDRQKALEAAMND 336
            FP  +FP+  S LR    F    + R  C+ EAKGNGAL  + D R +DRQKALEAAMND
Sbjct: 12   FPVNKFPLVCSNLR----FERILRVRFRCDAEAKGNGALFSDADSRSVDRQKALEAAMND 67

Query: 337  INNSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLAL 516
            INNSFGKGSVTRLGSAGGALVETF SGCLTLD ALGGGLPKGRIVEI+GPESSGKTTLAL
Sbjct: 68   INNSFGKGSVTRLGSAGGALVETFSSGCLTLDLALGGGLPKGRIVEIYGPESSGKTTLAL 127

Query: 517  HAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGA 696
            HA+AEVQKLGGNAMLVDAEHAFDPAYSR+LGVD+ENLIVCQPDNGEMALETADRMCRSGA
Sbjct: 128  HAMAEVQKLGGNAMLVDAEHAFDPAYSRSLGVDVENLIVCQPDNGEMALETADRMCRSGA 187

Query: 697  IDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY 876
            +DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRY
Sbjct: 188  VDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRY 247

Query: 877  KIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPY 1056
            KIGVFYGNPEVTSGGIALKFFAS+RLEIR +GKIKS KGDEDIG              PY
Sbjct: 248  KIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKSPKGDEDIGVKVRVRVQKSKVSRPY 307

Query: 1057 KQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLL 1236
            KQAEF+IIFGEGV  LGCILDCAEMMDI+ +KGSWYSY D RLGQGRDKALQYLRE+PLL
Sbjct: 308  KQAEFDIIFGEGVGNLGCILDCAEMMDIVSRKGSWYSYSDLRLGQGRDKALQYLRENPLL 367

Query: 1237 CSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1353
            C+++EK VRS M++  GQ G +         +ED +++E
Sbjct: 368  CTELEKGVRSAMSDGLGQ-GFAAPLGHLAPRDEDPIYEE 405


>ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG32971.1| protein recA [Zea
            mays] gi|238008650|gb|ACR35360.1| unknown [Zea mays]
            gi|414871794|tpg|DAA50351.1| TPA: putative recA DNA
            recombination family protein isoform 1 [Zea mays]
            gi|414871795|tpg|DAA50352.1| TPA: putative recA DNA
            recombination family protein isoform 2 [Zea mays]
          Length = 415

 Score =  598 bits (1542), Expect = e-168
 Identities = 301/376 (80%), Positives = 329/376 (87%), Gaps = 1/376 (0%)
 Frame = +1

Query: 232  RVHCEFEAKG-NGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF 408
            R+ CEF A G NGALSGE DPR +DRQK L+AAMNDINNSFGKGSVTRLGSAGGA VETF
Sbjct: 41   RLRCEFVAGGGNGALSGEDDPRLVDRQKVLDAAMNDINNSFGKGSVTRLGSAGGAFVETF 100

Query: 409  PSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 588
            PSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHAIAE+QKLGGNAMLVDAEHAFDP
Sbjct: 101  PSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHAFDP 160

Query: 589  AYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGM 768
            AYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGM
Sbjct: 161  AYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGM 220

Query: 769  QQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASL 948
            QQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFFAS+
Sbjct: 221  QQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASV 280

Query: 949  RLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAE 1128
            RLEIR +GKIKS KGDED+G              PYKQAEFEIIFGEGVSKLGC+LDCAE
Sbjct: 281  RLEIRLIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAE 340

Query: 1129 MMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYM 1308
            +MD++ KKGSWYSY D RLGQGR+KALQYLRE P  C +IEKVVR+ + E +  + L   
Sbjct: 341  LMDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTTCDEIEKVVRAMIPEGSRHMSLLAF 400

Query: 1309 KQSPLLENEDQVFDER 1356
             QS   E+E Q +DE+
Sbjct: 401  GQSSSTEDE-QAYDEQ 415


>ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
            gi|108710024|gb|ABF97819.1| DNA repair protein recA,
            chloroplast precursor, putative, expressed [Oryza sativa
            Japonica Group] gi|113549209|dbj|BAF12652.1| Os03g0639700
            [Oryza sativa Japonica Group]
            gi|215704578|dbj|BAG94211.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 418

 Score =  598 bits (1542), Expect = e-168
 Identities = 302/379 (79%), Positives = 331/379 (87%), Gaps = 1/379 (0%)
 Frame = +1

Query: 220  GKQARVHCEFEAKG-NGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGAL 396
            G+  R+ CEF A G NGALSGE DPR IDRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA 
Sbjct: 41   GRGRRLRCEFVAGGGNGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAF 100

Query: 397  VETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEH 576
            VETFPSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEH
Sbjct: 101  VETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEH 160

Query: 577  AFDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEG 756
            AFDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEG
Sbjct: 161  AFDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEG 220

Query: 757  EIGMQQIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKF 936
            EIGMQQ+GLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKF
Sbjct: 221  EIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKF 280

Query: 937  FASLRLEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCIL 1116
            FAS+RLEIR +GKIKS KGDED+G              PYKQAEFEIIFGEGVSKLGC+L
Sbjct: 281  FASVRLEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVL 340

Query: 1117 DCAEMMDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVG 1296
            DCAE+M+++ KKGSWYSY + RLGQGR+KALQYLRE P +C +IEK VR+ + E    + 
Sbjct: 341  DCAELMEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHMS 400

Query: 1297 LSYMKQSPLLENEDQVFDE 1353
            L    +S L E E+QV DE
Sbjct: 401  LLAFGRSSLTE-EEQVDDE 418


>ref|XP_003562019.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            isoform 2 [Brachypodium distachyon]
          Length = 430

 Score =  595 bits (1533), Expect = e-167
 Identities = 307/415 (73%), Positives = 338/415 (81%), Gaps = 19/415 (4%)
 Frame = +1

Query: 166  PPLRFPISRLRSWPVFNGGKQARVHCEFEAK-GNGALSGETDPRFIDRQKALEAAMNDIN 342
            P  R  +S  R+      G+  R+ CEF A  GNGALSGE DPR IDRQKAL+AAMNDIN
Sbjct: 16   PRPRRRVSATRASASGTTGRGRRLRCEFVASVGNGALSGEDDPRLIDRQKALDAAMNDIN 75

Query: 343  NSFGKGSVTRLGSAGGALVETFPSGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHA 522
            NSFGKGSVTRLGSAGGA VETFPSGCLTLD+ALGGGLPKGR+VE++GPESSGKTTLALHA
Sbjct: 76   NSFGKGSVTRLGSAGGAFVETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHA 135

Query: 523  IAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALE------------ 666
            IAE+QKLGGNAMLVDAEHAFDPAYS+ALGVDIENLIVCQPDNGEMALE            
Sbjct: 136  IAEIQKLGGNAMLVDAEHAFDPAYSKALGVDIENLIVCQPDNGEMALEISRTFVFVNLTC 195

Query: 667  ------TADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGN 828
                   ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQ+GLQARLMSQALRKMSGN
Sbjct: 196  MSLSLSVADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 255

Query: 829  ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSMGKIKSVKGDEDIG 1008
            ASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFFAS+RLEIR +GKIKS KGDED+G
Sbjct: 256  ASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRHIGKIKSAKGDEDVG 315

Query: 1009 XXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEMMDIIVKKGSWYSYGDQRLG 1188
                          PYKQAEFEI+FGEGVSKLGCILDCAE+M+++ KKGSWYSY D RLG
Sbjct: 316  VKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYKDIRLG 375

Query: 1189 QGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMKQSPLLENEDQVFDE 1353
            QGR+KALQYLRE P +C +IEKVVR+ + E T  + L    QS     E++V+DE
Sbjct: 376  QGREKALQYLRESPTICDEIEKVVRAMIPEGTRHMTLLAFGQSSSPTEEEEVYDE 430


>ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
            [Solanum tuberosum]
          Length = 419

 Score =  592 bits (1526), Expect = e-166
 Identities = 295/370 (79%), Positives = 329/370 (88%), Gaps = 1/370 (0%)
 Frame = +1

Query: 232  RVHCEFEAKGNGALSGETDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFP 411
            RV  EF+ K NG  S ++D RF+DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGALVETFP
Sbjct: 44   RVRSEFDHKINGTFSPDSDARFLDRQKALDAAMNDINSSFGKGSVTRLGSAGGALVETFP 103

Query: 412  SGCLTLDYALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 591
            SGCLTLD+ALGGG+PKGRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA
Sbjct: 104  SGCLTLDFALGGGIPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 163

Query: 592  YSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 771
            YS+ALGVD+ENLIVCQPDNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQ
Sbjct: 164  YSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQ 223

Query: 772  QIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLR 951
            Q+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+R
Sbjct: 224  QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 283

Query: 952  LEIRSMGKIKSVKGDEDIGXXXXXXXXXXXXXXPYKQAEFEIIFGEGVSKLGCILDCAEM 1131
            LEIRS GKIKS KGDE++G              PYKQAEFEI+FGEGVSKLGC+LDCAE+
Sbjct: 284  LEIRSTGKIKSAKGDEEVGIKVRVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEL 343

Query: 1132 MDIIVKKGSWYSYGDQRLGQGRDKALQYLREDPLLCSDIEKVVRSKMAEVTGQVGLSYMK 1311
            ++++ KKGSWY+YG+ RLGQGR+KALQYLRE+PLL  +IEK+VRS + E TG +G S +K
Sbjct: 344  IEVVAKKGSWYNYGEHRLGQGREKALQYLRENPLLSEEIEKMVRSSVLETTGFLGSSSLK 403

Query: 1312 QS-PLLENED 1338
               P L  ED
Sbjct: 404  HPLPQLLEED 413