BLASTX nr result

ID: Akebia25_contig00029530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00029530
         (494 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71828.1| hypothetical protein VITISV_020654 [Vitis vinifera]    50   2e-12
gb|AFB73912.1| polyprotein [Citrus sinensis]                           49   7e-12
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               50   7e-12
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...    50   8e-12
emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera]    49   2e-11
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               50   2e-11
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               50   2e-11
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               50   2e-11
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   49   4e-11
gb|AFB73911.1| polyprotein [Citrus sinensis]                           49   8e-11
emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]    49   1e-10
gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]      47   4e-10
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]    51   4e-10
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                 47   5e-10
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]                47   5e-10
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    47   7e-10
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...    47   7e-10
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    47   7e-10
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      47   7e-10
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         47   7e-10

>emb|CAN71828.1| hypothetical protein VITISV_020654 [Vitis vinifera]
          Length = 281

 Score = 50.1 bits (118), Expect(2) = 2e-12
 Identities = 25/59 (42%), Positives = 36/59 (61%)
 Frame = +3

Query: 204 QNWILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           ++WIL+S    HM L    F +Y+    G+V MGNN+S K+     VR++MFDG +K L
Sbjct: 105 EDWILDSSCMFHMCLNRDWFSTYETVFKGVVLMGNNASCKIASNGTVRIKMFDGVVKTL 163



 Score = 47.4 bits (111), Expect(2) = 2e-12
 Identities = 24/41 (58%), Positives = 29/41 (70%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISR 490
           +K L +VRHV DLK+ LI L  LD  GYK+T +SGV K SR
Sbjct: 160 VKTLGNVRHVPDLKRNLILLSTLDSKGYKYTGESGVLKGSR 200


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 48.9 bits (115), Expect(3) = 7e-12
 Identities = 20/58 (34%), Positives = 38/58 (65%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDLK 383
           W+++SGAT HM      F +Y+P   G V MGN+ + ++ G+  ++++MFDG ++ ++
Sbjct: 292 WLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTIE 349



 Score = 42.7 bits (99), Expect(3) = 7e-12
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 365 TIKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           TI+ +E+VRHV+ LKK L+SL  +D +G K   ++G+ KI +G
Sbjct: 344 TIRTIEEVRHVNGLKKNLLSLGQMDSHGCKTHVENGIMKIVKG 386



 Score = 23.5 bits (49), Expect(3) = 7e-12
 Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 3/23 (13%)
 Frame = +2

Query: 35  GRVKKNCW---KRRELGSSKDSS 94
           G VKK CW   KRRE G   +SS
Sbjct: 237 GHVKKECWSNQKRRE-GKEPESS 258


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 50.1 bits (118), Expect(3) = 7e-12
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDLK 383
           WI++SGAT HM  +   F SY+P   G V MGN+ + ++ G+  +RL+M DG ++ ++
Sbjct: 291 WIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348



 Score = 40.4 bits (93), Expect(3) = 7e-12
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = +2

Query: 365 TIKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           T+++++ VRHV  LKK L+S+  LD  G K   +SG+ K+ +G
Sbjct: 343 TVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHSESGILKVVKG 385



 Score = 24.6 bits (52), Expect(3) = 7e-12
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 29  LSGRVKKNCWKRRELGSSKDSSLGSE 106
           + G VKK CW  ++ G     +  S+
Sbjct: 235 MKGHVKKECWNNKKNGEKNSEATTSQ 260


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score = 50.1 bits (118), Expect(2) = 8e-12
 Identities = 22/57 (38%), Positives = 38/57 (66%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           W+L++G T+HM      F +Y+P + G V MG+N+  KV G+  ++++MFDG ++ L
Sbjct: 242 WLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIKMFDGCIRTL 298



 Score = 45.4 bits (106), Expect(2) = 8e-12
 Identities = 19/42 (45%), Positives = 29/42 (69%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           I+ L DVRH+  LK+ LISL  LD  GY+++   G+ K+++G
Sbjct: 295 IRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKG 336


>emb|CAN79451.1| hypothetical protein VITISV_001677 [Vitis vinifera]
          Length = 805

 Score = 48.5 bits (114), Expect(2) = 2e-11
 Identities = 23/42 (54%), Positives = 29/42 (69%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           ++ L DVRHVSDL K LISL  LD NG+ +    GV K+S+G
Sbjct: 198 VRTLCDVRHVSDLXKNLISLGTLDCNGFSYKSTXGVMKVSKG 239



 Score = 45.4 bits (106), Expect(2) = 2e-11
 Identities = 22/57 (38%), Positives = 36/57 (63%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           WIL+S  ++HM      F++Y+    G V MGN++S KV G+  + ++MFDG ++ L
Sbjct: 145 WILDSACSYHMTPNKDWFNTYRSVNSGSVLMGNDASCKVAGIGNIIIKMFDGVVRTL 201


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 50.1 bits (118), Expect(3) = 2e-11
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDLK 383
           WI++SGAT HM  +   F SY+P   G V MGN+ + ++ G+  +RL+M DG ++ ++
Sbjct: 291 WIMDSGATWHMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348



 Score = 40.0 bits (92), Expect(3) = 2e-11
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = +2

Query: 365 TIKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           T+++++ VRHV  LKK L+S+  LD  G K   +SG+ K+ +G
Sbjct: 343 TVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKG 385



 Score = 23.1 bits (48), Expect(3) = 2e-11
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 29  LSGRVKKNCWKRRELGSSKDSSLGSE 106
           + G VKK CW  ++ G     +  S+
Sbjct: 235 MKGHVKKECWNIKKNGEKNSEASTSQ 260


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 50.1 bits (118), Expect(3) = 2e-11
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDLK 383
           WI++SGAT HM  +   F SY+P   G V MGN+ + ++ G+  +RL+M DG ++ ++
Sbjct: 291 WIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348



 Score = 40.0 bits (92), Expect(3) = 2e-11
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = +2

Query: 365 TIKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           T+++++ VRHV  LKK L+S+  LD  G K   +SG+ K+ +G
Sbjct: 343 TVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKG 385



 Score = 23.1 bits (48), Expect(3) = 2e-11
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 29  LSGRVKKNCWKRRELGSSKDSSLGSE 106
           + G VKK CW  ++ G     +  S+
Sbjct: 235 MKGHVKKECWNIKKNGEKNSEASTSQ 260


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 50.1 bits (118), Expect(3) = 2e-11
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDLK 383
           WI++SGAT HM  +   F SY+P   G V MGN+ + ++ G+  +RL+M DG ++ ++
Sbjct: 291 WIMDSGATWHMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQ 348



 Score = 40.0 bits (92), Expect(3) = 2e-11
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = +2

Query: 365 TIKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           T+++++ VRHV  LKK L+S+  LD  G K   +SG+ K+ +G
Sbjct: 343 TVRKIQGVRHVKGLKKNLLSVGQLDDLGCKIHTESGILKVVKG 385



 Score = 23.1 bits (48), Expect(3) = 2e-11
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +2

Query: 29  LSGRVKKNCWKRRELGSSKDSSLGSE 106
           + G VKK CW  ++ G     +  S+
Sbjct: 235 MKGHVKKECWNIKKNGEKNSEASTSQ 260


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 49.3 bits (116), Expect(2) = 4e-11
 Identities = 22/58 (37%), Positives = 39/58 (67%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDLK 383
           WI++SGAT HM      F +Y+P   G V MGN+ + +++G+  V+++M+DG ++ L+
Sbjct: 291 WIVDSGATWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVGIGTVKIKMYDGTIRTLQ 348



 Score = 43.9 bits (102), Expect(2) = 4e-11
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = +2

Query: 365 TIKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           TI+ L++VRHV +L K L+S+  LD  GYK+  Q G+ K+ +G
Sbjct: 343 TIRTLQEVRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKG 385


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score = 48.5 bits (114), Expect(2) = 8e-11
 Identities = 20/57 (35%), Positives = 37/57 (64%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           W+++SGAT HM      F +Y+P   G V MGN+ + ++ G+  ++++MFDG ++ +
Sbjct: 292 WLIDSGATWHMTSRREWFHTYEPISGGSVYMGNDHALEIAGIGTIKIKMFDGTIRTI 348



 Score = 43.5 bits (101), Expect(2) = 8e-11
 Identities = 20/43 (46%), Positives = 31/43 (72%)
 Frame = +2

Query: 365 TIKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           TI+ + +VRHV+ LKK L+SL  +D +GYK   ++G+ KI +G
Sbjct: 344 TIRTIGEVRHVNGLKKNLLSLGQMDSHGYKTHVENGIMKIVKG 386


>emb|CAN80490.1| hypothetical protein VITISV_004703 [Vitis vinifera]
          Length = 777

 Score = 49.3 bits (116), Expect(2) = 1e-10
 Identities = 26/72 (36%), Positives = 41/72 (56%)
 Frame = +3

Query: 168 EVLMVVNKPMFQQNWILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVR 347
           EVL +   P  ++ W+L+SG T+HM      F SY+    G + +GNN S  V+G+  + 
Sbjct: 165 EVLTIRLNPNHEE-WVLDSGCTYHMCPRRDWFSSYQEVNGGKLLLGNNMSCNVVGIGTMA 223

Query: 348 LRMFDGQLKDLK 383
           + M DG+ + LK
Sbjct: 224 INMHDGKTRTLK 235



 Score = 42.0 bits (97), Expect(2) = 1e-10
 Identities = 20/40 (50%), Positives = 28/40 (70%)
 Frame = +2

Query: 371 KRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISR 490
           + L++VRHV DLK+ LISL  LD +GY F  ++G   IS+
Sbjct: 232 RTLKEVRHVPDLKRNLISLGTLDKSGYNFKAKNGKLTISK 271


>gb|AAT44257.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1211

 Score = 46.6 bits (109), Expect(2) = 4e-10
 Identities = 21/57 (36%), Positives = 38/57 (66%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           WIL++  T+HM L    F +Y+  + G V MG+++  +V G++ V+++MFDG ++ L
Sbjct: 300 WILDTACTYHMCLNRDWFATYEAVQGGTVLMGDDTPCEVAGVETVQIKMFDGCIRTL 356



 Score = 43.1 bits (100), Expect(2) = 4e-10
 Identities = 19/42 (45%), Positives = 29/42 (69%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           I+ L DVRH+ +LK+ LISL  LD   YK++   G+ K+++G
Sbjct: 353 IRTLSDVRHIPNLKRSLISLCTLDRKVYKYSGGDGILKVTKG 394


>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
          Length = 817

 Score = 50.8 bits (120), Expect(2) = 4e-10
 Identities = 25/60 (41%), Positives = 34/60 (56%)
 Frame = +3

Query: 204 QNWILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDLK 383
           + W+L+SG T+HM      F SY+    G V +GNN S  V+G+  V + MFDG    LK
Sbjct: 46  EEWVLDSGCTYHMCPRIDWFSSYQEFNGGNVLLGNNMSCSVVGIGTVAINMFDGMKSTLK 105



 Score = 38.9 bits (89), Expect(2) = 4e-10
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = +2

Query: 377 LEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           L++VRHV DLK  LISL  LD +GY F  ++    IS+G
Sbjct: 104 LKEVRHVPDLKINLISLGTLDESGYNFKAENRKLTISKG 142


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score = 47.0 bits (110), Expect(2) = 5e-10
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           I+ L DVRH+ +LK+ LISL  LD  GYK++   G+ K+++G
Sbjct: 338 IRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKG 379



 Score = 42.4 bits (98), Expect(2) = 5e-10
 Identities = 20/57 (35%), Positives = 36/57 (63%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           WIL++  T+HM      F +Y+  + G V MG+++  +V G+  V+++MFDG ++ L
Sbjct: 285 WILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 341


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score = 47.0 bits (110), Expect(2) = 5e-10
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           I+ L DVRH+ +LK+ LISL  LD  GYK++   G+ K+++G
Sbjct: 170 IRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKG 211



 Score = 42.4 bits (98), Expect(2) = 5e-10
 Identities = 20/57 (35%), Positives = 36/57 (63%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           WIL++  T+HM      F +Y+  + G V MG+++  +V G+  V+++MFDG ++ L
Sbjct: 117 WILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 173


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score = 46.6 bits (109), Expect(2) = 7e-10
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           I+ L DVRH+ +LK+ LISL  LD  GYK++   G+ K+++G
Sbjct: 560 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 601



 Score = 42.4 bits (98), Expect(2) = 7e-10
 Identities = 20/57 (35%), Positives = 35/57 (61%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           WILN+   +HM      F +Y+  + G V MG+++  +V G+  V+++MFDG ++ L
Sbjct: 507 WILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 563


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score = 46.6 bits (109), Expect(2) = 7e-10
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           I+ L DVRH+ +LK+ LISL  LD  GYK++   G+ K+++G
Sbjct: 353 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 394



 Score = 42.4 bits (98), Expect(2) = 7e-10
 Identities = 20/57 (35%), Positives = 35/57 (61%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           WILN+   +HM      F +Y+  + G V MG+++  +V G+  V+++MFDG ++ L
Sbjct: 300 WILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 356


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 46.6 bits (109), Expect(2) = 7e-10
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           I+ L DVRH+ +LK+ LISL  LD  GYK++   G+ K+++G
Sbjct: 388 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 429



 Score = 42.4 bits (98), Expect(2) = 7e-10
 Identities = 20/57 (35%), Positives = 36/57 (63%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           WIL++  T+HM      F +Y+  + G V MG+++  +V G+  V+++MFDG ++ L
Sbjct: 335 WILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTL 391


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 46.6 bits (109), Expect(2) = 7e-10
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           I+ L DVRH+ +LK+ LISL  LD  GYK++   G+ K+++G
Sbjct: 388 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 429



 Score = 42.4 bits (98), Expect(2) = 7e-10
 Identities = 20/57 (35%), Positives = 36/57 (63%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           WIL++  T+HM      F +Y+  + G V MG+++  +V G+  V+++MFDG ++ L
Sbjct: 335 WILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTL 391


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 46.6 bits (109), Expect(2) = 7e-10
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +2

Query: 368 IKRLEDVRHVSDLKKMLISLPALDLNGYKFTEQSGVTKISRG 493
           I+ L DVRH+ +LK+ LISL  LD  GYK++   G+ K+++G
Sbjct: 353 IRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKG 394



 Score = 42.4 bits (98), Expect(2) = 7e-10
 Identities = 20/57 (35%), Positives = 36/57 (63%)
 Frame = +3

Query: 210 WILNSGATHHMYLY*S*FDSYKPCE*GLVSMGNNSSSKVIGMDLVRLRMFDGQLKDL 380
           WIL++  T+HM      F +Y+  + G V MG+++  +V G+  V+++MFDG ++ L
Sbjct: 300 WILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTL 356


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