BLASTX nr result
ID: Akebia25_contig00028328
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00028328
(653 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF82809.1|AF283277_1 polyadenylation cleavage/specificity fa... 74 5e-11
ref|NP_197776.1| cleavage and polyadenylation specificity factor... 74 5e-11
ref|XP_002872080.1| CPSF100 [Arabidopsis lyrata subsp. lyrata] g... 74 5e-11
ref|XP_006394646.1| hypothetical protein EUTSA_v10003707mg [Eutr... 72 2e-10
ref|XP_006287134.1| hypothetical protein CARUB_v10000306mg [Caps... 70 4e-10
ref|XP_002872078.1| hypothetical protein ARALYDRAFT_910398 [Arab... 70 4e-10
ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec... 70 6e-10
ref|XP_007038719.1| Cleavage and polyadenylation specificity fac... 69 1e-09
ref|XP_007038718.1| Cleavage and polyadenylation specificity fac... 69 1e-09
ref|XP_007220238.1| hypothetical protein PRUPE_ppa001928mg [Prun... 69 1e-09
ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation spec... 69 1e-09
ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citr... 69 1e-09
ref|XP_006421947.1| hypothetical protein CICLE_v10004414mg [Citr... 69 1e-09
ref|XP_003590295.1| Cleavage and polyadenylation specificity fac... 68 2e-09
ref|XP_006827641.1| hypothetical protein AMTR_s00009p00247750 [A... 68 3e-09
gb|EXC19142.1| Cleavage and polyadenylation specificity factor s... 67 4e-09
ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation spec... 66 1e-08
ref|XP_007152251.1| hypothetical protein PHAVU_004G114000g [Phas... 66 1e-08
ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation spec... 66 1e-08
ref|XP_006587303.1| PREDICTED: cleavage and polyadenylation spec... 65 1e-08
>gb|AAF82809.1|AF283277_1 polyadenylation cleavage/specificity factor 100 kDa subunit
[Arabidopsis thaliana]
Length = 739
Score = 73.6 bits (179), Expect = 5e-11
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVSDFDLFTLDDIDSAFQNV+RLTYSQNYHLS KGE
Sbjct: 103 LSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNYHLSGKGE 142
>ref|NP_197776.1| cleavage and polyadenylation specificity factor 100 [Arabidopsis
thaliana] gi|18203240|sp|Q9LKF9.2|CPSF2_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 2; AltName: Full=Cleavage and polyadenylation
specificity factor 100 kDa subunit; Short=AtCPSF100;
Short=CPSF 100 kDa subunit; AltName: Full=Protein EMBRYO
DEFECTIVE 1265; AltName: Full=Protein ENHANCED SILENCING
PHENOTYPE 5 gi|10176855|dbj|BAB10061.1| cleavage and
polyadenylation specificity factor [Arabidopsis
thaliana] gi|14334618|gb|AAK59487.1| putative cleavage
and polyadenylation specificity factor [Arabidopsis
thaliana] gi|28393921|gb|AAO42368.1| putative cleavage
and polyadenylation specificity factor [Arabidopsis
thaliana] gi|332005845|gb|AED93228.1| cleavage and
polyadenylation specificity factor 100 [Arabidopsis
thaliana]
Length = 739
Score = 73.6 bits (179), Expect = 5e-11
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVSDFDLFTLDDIDSAFQNV+RLTYSQNYHLS KGE
Sbjct: 103 LSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNYHLSGKGE 142
>ref|XP_002872080.1| CPSF100 [Arabidopsis lyrata subsp. lyrata]
gi|297317917|gb|EFH48339.1| CPSF100 [Arabidopsis lyrata
subsp. lyrata]
Length = 739
Score = 73.6 bits (179), Expect = 5e-11
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVSDFDLFTLDDIDSAFQNV+RLTYSQNYHLS KGE
Sbjct: 103 LSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNYHLSGKGE 142
>ref|XP_006394646.1| hypothetical protein EUTSA_v10003707mg [Eutrema salsugineum]
gi|557091285|gb|ESQ31932.1| hypothetical protein
EUTSA_v10003707mg [Eutrema salsugineum]
Length = 739
Score = 71.6 bits (174), Expect = 2e-10
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVSDFDLFTLDDIDSAFQNV+RLTYSQNYHL KGE
Sbjct: 103 LSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNYHLPGKGE 142
>ref|XP_006287134.1| hypothetical protein CARUB_v10000306mg [Capsella rubella]
gi|482555840|gb|EOA20032.1| hypothetical protein
CARUB_v10000306mg [Capsella rubella]
Length = 739
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVSDFDLFTLDDID+AFQNV+RLTYSQNYHL KGE
Sbjct: 103 LSRKQVSDFDLFTLDDIDNAFQNVIRLTYSQNYHLPGKGE 142
>ref|XP_002872078.1| hypothetical protein ARALYDRAFT_910398 [Arabidopsis lyrata subsp.
lyrata] gi|297317915|gb|EFH48337.1| hypothetical protein
ARALYDRAFT_910398 [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKG 648
L +QVSDFDLFTLDDIDSAFQNV+RLTYSQNYHLS +G
Sbjct: 29 LSRKQVSDFDLFTLDDIDSAFQNVIRLTYSQNYHLSGRG 67
>ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2 [Vitis vinifera] gi|302143847|emb|CBI22708.3| unnamed
protein product [Vitis vinifera]
Length = 740
Score = 70.1 bits (170), Expect = 6e-10
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVSDFDLFTLDDIDSAFQNV RLTYSQNYHL KGE
Sbjct: 103 LSRKQVSDFDLFTLDDIDSAFQNVTRLTYSQNYHLFGKGE 142
>ref|XP_007038719.1| Cleavage and polyadenylation specificity factor 100 isoform 2
[Theobroma cacao] gi|508775964|gb|EOY23220.1| Cleavage
and polyadenylation specificity factor 100 isoform 2
[Theobroma cacao]
Length = 542
Score = 69.3 bits (168), Expect = 1e-09
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVS+F+LFTLDDIDSAFQNV RLTYSQNYHLS KGE
Sbjct: 103 LSRKQVSEFELFTLDDIDSAFQNVTRLTYSQNYHLSGKGE 142
>ref|XP_007038718.1| Cleavage and polyadenylation specificity factor 100 isoform 1
[Theobroma cacao] gi|508775963|gb|EOY23219.1| Cleavage
and polyadenylation specificity factor 100 isoform 1
[Theobroma cacao]
Length = 742
Score = 69.3 bits (168), Expect = 1e-09
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVS+F+LFTLDDIDSAFQNV RLTYSQNYHLS KGE
Sbjct: 103 LSRKQVSEFELFTLDDIDSAFQNVTRLTYSQNYHLSGKGE 142
>ref|XP_007220238.1| hypothetical protein PRUPE_ppa001928mg [Prunus persica]
gi|462416700|gb|EMJ21437.1| hypothetical protein
PRUPE_ppa001928mg [Prunus persica]
Length = 740
Score = 69.3 bits (168), Expect = 1e-09
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVSDFDLFTLDDIDSAFQNV RLTY+QN+HLS KGE
Sbjct: 103 LSRKQVSDFDLFTLDDIDSAFQNVTRLTYAQNHHLSGKGE 142
>ref|XP_006490412.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform X2 [Citrus sinensis]
Length = 738
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVS+FDLFTLDDIDSAFQ+V RLTYSQNYHLS KGE
Sbjct: 103 LSRRQVSEFDLFTLDDIDSAFQSVTRLTYSQNYHLSGKGE 142
>ref|XP_006421948.1| hypothetical protein CICLE_v10004414mg [Citrus clementina]
gi|568874619|ref|XP_006490411.1| PREDICTED: cleavage and
polyadenylation specificity factor subunit 2-like
isoform X1 [Citrus sinensis] gi|557523821|gb|ESR35188.1|
hypothetical protein CICLE_v10004414mg [Citrus
clementina]
Length = 739
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVS+FDLFTLDDIDSAFQ+V RLTYSQNYHLS KGE
Sbjct: 103 LSRRQVSEFDLFTLDDIDSAFQSVTRLTYSQNYHLSGKGE 142
>ref|XP_006421947.1| hypothetical protein CICLE_v10004414mg [Citrus clementina]
gi|557523820|gb|ESR35187.1| hypothetical protein
CICLE_v10004414mg [Citrus clementina]
Length = 634
Score = 68.9 bits (167), Expect = 1e-09
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVS+FDLFTLDDIDSAFQ+V RLTYSQNYHLS KGE
Sbjct: 103 LSRRQVSEFDLFTLDDIDSAFQSVTRLTYSQNYHLSGKGE 142
>ref|XP_003590295.1| Cleavage and polyadenylation specificity factor subunit [Medicago
truncatula] gi|355479343|gb|AES60546.1| Cleavage and
polyadenylation specificity factor subunit [Medicago
truncatula]
Length = 630
Score = 68.2 bits (165), Expect = 2e-09
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVSDFDLFTLDDIDSAFQ V RLTYSQN+HLS KGE
Sbjct: 103 LSRKQVSDFDLFTLDDIDSAFQTVTRLTYSQNHHLSGKGE 142
>ref|XP_006827641.1| hypothetical protein AMTR_s00009p00247750 [Amborella trichopoda]
gi|548832261|gb|ERM95057.1| hypothetical protein
AMTR_s00009p00247750 [Amborella trichopoda]
Length = 737
Score = 67.8 bits (164), Expect = 3e-09
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVSDFDLF+LDDID+AFQNV RLTYSQ+YHLS KGE
Sbjct: 103 LSRRQVSDFDLFSLDDIDAAFQNVTRLTYSQDYHLSGKGE 142
>gb|EXC19142.1| Cleavage and polyadenylation specificity factor subunit 2 [Morus
notabilis]
Length = 741
Score = 67.4 bits (163), Expect = 4e-09
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 541 QQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
+QVS+FDLFTLDDIDSAFQNV RLTY+QN+HLS KGE
Sbjct: 106 KQVSEFDLFTLDDIDSAFQNVTRLTYAQNHHLSGKGE 142
>ref|XP_006353867.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like [Solanum tuberosum]
Length = 739
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVS+FDLFTLDDIDSAFQNV RLTYSQN+++S KGE
Sbjct: 103 LSRKQVSEFDLFTLDDIDSAFQNVTRLTYSQNHYMSGKGE 142
>ref|XP_007152251.1| hypothetical protein PHAVU_004G114000g [Phaseolus vulgaris]
gi|561025560|gb|ESW24245.1| hypothetical protein
PHAVU_004G114000g [Phaseolus vulgaris]
Length = 739
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVS+FDLFTLDDIDSAFQ+V RLTYSQN+HL+ KGE
Sbjct: 103 LSRKQVSEFDLFTLDDIDSAFQSVTRLTYSQNHHLTGKGE 142
>ref|XP_004234405.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like [Solanum lycopersicum]
Length = 739
Score = 65.9 bits (159), Expect = 1e-08
Identities = 31/40 (77%), Positives = 36/40 (90%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVS+FDLFTLDDIDSAFQNV RLTYSQN+++S KGE
Sbjct: 103 LSRKQVSEFDLFTLDDIDSAFQNVTRLTYSQNHYMSGKGE 142
>ref|XP_006587303.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
2-like isoform X2 [Glycine max]
Length = 727
Score = 65.5 bits (158), Expect = 1e-08
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +1
Query: 532 LPLQQVSDFDLFTLDDIDSAFQNVVRLTYSQNYHLSEKGE 651
L +QVS+FDLFTLDDIDSAFQ+V RLTYSQN+H S KGE
Sbjct: 91 LSRKQVSEFDLFTLDDIDSAFQSVTRLTYSQNHHFSGKGE 130