BLASTX nr result

ID: Akebia25_contig00028120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00028120
         (300 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thal...    41   3e-06
ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis t...    41   3e-06
gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arab...    41   3e-06

>gb|AAF63113.1|AC006423_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 668

 Score = 40.8 bits (94), Expect(2) = 3e-06
 Identities = 15/41 (36%), Positives = 28/41 (68%)
 Frame = -2

Query: 293 LHDLSECLQLTGLMDMKAKGCHYTWSNQQNNRRILSKIAKS 171
           L +   CL+ + L+D+ ++G HYTWSN Q++  I+ K+ ++
Sbjct: 185 LEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRA 225



 Score = 35.8 bits (81), Expect(2) = 3e-06
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -3

Query: 175 RVLTNIRWLESLNEVKANFQTCGISYHSPTVVNKGVEEQSKKRPFRFFNFLIEDESF 5
           R + N  W  S     A F+  G+S HSP ++      +  K+ FR+F+FL    +F
Sbjct: 224 RAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPTF 280


>ref|NP_175044.1| DNAse I-like superfamily protein [Arabidopsis thaliana]
           gi|332193872|gb|AEE31993.1| DNAse I-like superfamily
           protein [Arabidopsis thaliana]
          Length = 626

 Score = 40.8 bits (94), Expect(2) = 3e-06
 Identities = 15/41 (36%), Positives = 28/41 (68%)
 Frame = -2

Query: 293 LHDLSECLQLTGLMDMKAKGCHYTWSNQQNNRRILSKIAKS 171
           L +   CL+ + L+D+ ++G HYTWSN Q++  I+ K+ ++
Sbjct: 249 LEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRA 289



 Score = 35.8 bits (81), Expect(2) = 3e-06
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -3

Query: 175 RVLTNIRWLESLNEVKANFQTCGISYHSPTVVNKGVEEQSKKRPFRFFNFLIEDESF 5
           R + N  W  S     A F+  G+S HSP ++      +  K+ FR+F+FL    +F
Sbjct: 288 RAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPTF 344


>gb|AAF63129.1|AC009526_14 Similar to reverse transcriptase [Arabidopsis thaliana]
          Length = 602

 Score = 40.8 bits (94), Expect(2) = 3e-06
 Identities = 15/41 (36%), Positives = 28/41 (68%)
 Frame = -2

Query: 293 LHDLSECLQLTGLMDMKAKGCHYTWSNQQNNRRILSKIAKS 171
           L +   CL+ + L+D+ ++G HYTWSN Q++  I+ K+ ++
Sbjct: 185 LEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPIIRKLDRA 225



 Score = 35.8 bits (81), Expect(2) = 3e-06
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -3

Query: 175 RVLTNIRWLESLNEVKANFQTCGISYHSPTVVNKGVEEQSKKRPFRFFNFLIEDESF 5
           R + N  W  S     A F+  G+S HSP ++      +  K+ FR+F+FL    +F
Sbjct: 224 RAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLPKRSKKCFRYFSFLSTHPTF 280


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