BLASTX nr result
ID: Akebia25_contig00027680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00027680
(489 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera] 57 2e-08
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera] 54 9e-08
emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera] 54 9e-08
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr... 57 3e-07
emb|CAN69714.1| hypothetical protein VITISV_011262 [Vitis vinifera] 55 5e-07
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera] 52 7e-07
emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group] 55 1e-06
gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subc... 55 1e-06
dbj|BAA02266.1| reverse transcriptase [Asparagus officinalis] 57 2e-06
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group] 54 2e-06
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group] 54 2e-06
dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ... 54 2e-06
gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group... 54 2e-06
emb|CAE01741.2| OSJNBb0056F09.4 [Oryza sativa Japonica Group] 54 2e-06
gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subc... 54 3e-06
gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subc... 54 3e-06
gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subc... 54 3e-06
gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc... 54 3e-06
emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group] 54 3e-06
gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subc... 54 3e-06
>emb|CAN63736.1| hypothetical protein VITISV_037249 [Vitis vinifera]
Length = 839
Score = 57.0 bits (136), Expect(3) = 2e-08
Identities = 27/49 (55%), Positives = 39/49 (79%), Gaps = 5/49 (10%)
Frame = +3
Query: 252 SL*QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIY-----SQYII 383
+L +SLY LKQAPKQ HEKFD+V+LS+ F++NE+ +C+Y S+Y+I
Sbjct: 623 NLIKSLYGLKQAPKQWHEKFDKVMLSNDFKINESDKCVYIKNTQSEYVI 671
Score = 25.4 bits (54), Expect(3) = 2e-08
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 145 ILVRSSLEVH*MDVKTALLN 204
I+ +LE+H MDVKT LN
Sbjct: 578 IVALHNLEIHQMDVKTTFLN 597
Score = 21.2 bits (43), Expect(3) = 2e-08
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 203 IYLEQREGYFQQCQEK 250
IY+EQ EG+ QEK
Sbjct: 604 IYMEQPEGFVALGQEK 619
>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
Length = 1277
Score = 53.5 bits (127), Expect(3) = 9e-08
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIY 368
+SLY LKQAPKQ HEKFD V+LS F++NE +C+Y
Sbjct: 912 KSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVY 947
Score = 26.2 bits (56), Expect(3) = 9e-08
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 160 SLEVH*MDVKTALLN 204
+LE+H MDVKTA LN
Sbjct: 869 NLEIHQMDVKTAFLN 883
Score = 21.2 bits (43), Expect(3) = 9e-08
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 203 IYLEQREGYFQQCQEK 250
IY+EQ EG+ QEK
Sbjct: 890 IYMEQPEGFSAPGQEK 905
>emb|CAN76029.1| hypothetical protein VITISV_016069 [Vitis vinifera]
Length = 1096
Score = 53.5 bits (127), Expect(3) = 9e-08
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIY 368
+SLY LKQAPKQ HEKFD V+LS F++NE +C+Y
Sbjct: 744 KSLYGLKQAPKQWHEKFDNVMLSHGFKINECDKCVY 779
Score = 26.2 bits (56), Expect(3) = 9e-08
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 160 SLEVH*MDVKTALLN 204
+LE+H MDVKTA LN
Sbjct: 701 NLEIHQMDVKTAFLN 715
Score = 21.2 bits (43), Expect(3) = 9e-08
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 203 IYLEQREGYFQQCQEK 250
IY+EQ EG+ QEK
Sbjct: 722 IYMEQPEGFSAPGQEK 737
>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
Length = 1034
Score = 56.6 bits (135), Expect(2) = 3e-07
Identities = 25/48 (52%), Positives = 37/48 (77%)
Frame = +3
Query: 234 NNAKKNSL*QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
N K L +SLY LKQAPKQ H++FD+ VLS+ FE+N++ +C+YS++
Sbjct: 896 NEHKVCKLVKSLYGLKQAPKQWHQRFDEAVLSNGFELNQSDKCLYSKF 943
Score = 23.5 bits (49), Expect(2) = 3e-07
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 160 SLEVH*MDVKTALLN 204
+L +H MDVKTA LN
Sbjct: 862 NLVIHQMDVKTAFLN 876
>emb|CAN69714.1| hypothetical protein VITISV_011262 [Vitis vinifera]
Length = 233
Score = 55.1 bits (131), Expect(2) = 5e-07
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 5/52 (9%)
Frame = +3
Query: 243 KKNSL*QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIY-----SQYII 383
K L +SLY LKQAPKQ HEKFD+V+LS+ F++NE +C++ S+Y+I
Sbjct: 88 KVYKLIKSLYGLKQAPKQWHEKFDKVMLSNDFKINECDKCVFTKNTQSEYVI 139
Score = 24.3 bits (51), Expect(2) = 5e-07
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 160 SLEVH*MDVKTALLN 204
+LE+H MDVKT LN
Sbjct: 51 NLEIHQMDVKTIFLN 65
>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
Length = 839
Score = 52.0 bits (123), Expect(3) = 7e-07
Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 5/46 (10%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIY-----SQYII 383
+SLY LKQAPKQ HEKFD+V+LS+ F++NE + +Y S+Y+I
Sbjct: 575 KSLYGLKQAPKQWHEKFDKVMLSNDFKINECDKYVYTRNTQSEYVI 620
Score = 23.9 bits (50), Expect(3) = 7e-07
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 145 ILVRSSLEVH*MDVKTALLN 204
I+ + E+H MDVKT LN
Sbjct: 528 IVALHNFEIHQMDVKTTFLN 547
Score = 21.9 bits (45), Expect(3) = 7e-07
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 203 IYLEQREGYFQQCQEK 250
IY+EQ EG+ QEK
Sbjct: 553 IYMEQSEGFVAPGQEK 568
>emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group]
Length = 1099
Score = 55.1 bits (131), Expect(2) = 1e-06
Identities = 24/39 (61%), Positives = 32/39 (82%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD + S+ F VNEA++C+Y++Y
Sbjct: 860 KSLYGLKQAPKQWHEKFDTTLTSAGFVVNEANKCVYNRY 898
Score = 23.1 bits (48), Expect(2) = 1e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 818 LLVHQMDVKTAFLN 831
>gb|ABA91250.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1320
Score = 54.7 bits (130), Expect(2) = 1e-06
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD+ + S+ F VNEA +C+Y +Y
Sbjct: 938 KSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRY 976
Score = 23.1 bits (48), Expect(2) = 1e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 896 LLVHQMDVKTAFLN 909
>dbj|BAA02266.1| reverse transcriptase [Asparagus officinalis]
Length = 81
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = +3
Query: 234 NNAKKNSL*QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
N K L +SLY LKQAPKQ HEKFD V+LS F+ N A +CIYS++
Sbjct: 24 NERKVCKLIKSLYGLKQAPKQWHEKFDSVILSYGFKYNSADKCIYSKF 71
>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
Length = 1320
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD+ ++S+ F VNEA +C+Y ++
Sbjct: 938 KSLYGLKQAPKQWHEKFDKTLISAGFAVNEADKCVYYRH 976
Score = 23.1 bits (48), Expect(2) = 2e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 896 LLVHQMDVKTAFLN 909
>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
Length = 1302
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD+ ++S+ F VNEA +C+Y ++
Sbjct: 938 KSLYGLKQAPKQWHEKFDKTLISAGFAVNEADKCVYYRH 976
Score = 23.1 bits (48), Expect(2) = 2e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 896 LLVHQMDVKTAFLN 909
>dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group]
Length = 1268
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD + S+ F VNEA +C+Y +Y
Sbjct: 903 KSLYGLKQAPKQWHEKFDNTLTSAGFVVNEADKCVYYRY 941
Score = 23.1 bits (48), Expect(2) = 2e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 861 LLVHQMDVKTAFLN 874
>gb|AAO60021.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711758|gb|ABF99553.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1224
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD+++ S+ F VNEA +C+Y ++
Sbjct: 860 KSLYGLKQAPKQWHEKFDKILTSAGFAVNEADKCVYYRH 898
Score = 23.1 bits (48), Expect(2) = 2e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 818 LLVHQMDVKTAFLN 831
>emb|CAE01741.2| OSJNBb0056F09.4 [Oryza sativa Japonica Group]
Length = 612
Score = 53.9 bits (128), Expect(2) = 2e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD + S+ F VNEA +C+Y +Y
Sbjct: 335 KSLYGLKQAPKQWHEKFDNTLTSAGFVVNEADKCVYYRY 373
Score = 23.1 bits (48), Expect(2) = 2e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 293 LLVHQMDVKTAFLN 306
>gb|AAP54390.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1479
Score = 53.5 bits (127), Expect(2) = 3e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD + S+ F VNEA +C+Y +Y
Sbjct: 1114 KSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRY 1152
Score = 23.1 bits (48), Expect(2) = 3e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 1072 LLVHQMDVKTAFLN 1085
>gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1457
Score = 53.5 bits (127), Expect(2) = 3e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD + S+ F VNEA +C+Y +Y
Sbjct: 1092 KSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRY 1130
Score = 23.1 bits (48), Expect(2) = 3e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 1050 LLVHQMDVKTAFLN 1063
>gb|ABA98885.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1452
Score = 53.5 bits (127), Expect(2) = 3e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD + S+ F VNEA +C+Y +Y
Sbjct: 1091 KSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRY 1129
Score = 23.1 bits (48), Expect(2) = 3e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 1049 LLVHQMDVKTAFLN 1062
>gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1448
Score = 53.5 bits (127), Expect(2) = 3e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD + S+ F VNEA +C+Y +Y
Sbjct: 1083 KSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRY 1121
Score = 23.1 bits (48), Expect(2) = 3e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 1041 LLVHQMDVKTAFLN 1054
>emb|CAH66912.1| OSIGBa0126B18.5 [Oryza sativa Indica Group]
Length = 1413
Score = 53.5 bits (127), Expect(2) = 3e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD + S+ F VNEA +C+Y +Y
Sbjct: 1048 KSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRY 1086
Score = 23.1 bits (48), Expect(2) = 3e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 1006 LLVHQMDVKTAFLN 1019
>gb|ABF99156.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1413
Score = 53.5 bits (127), Expect(2) = 3e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +3
Query: 261 QSLYRLKQAPKQQHEKFDQVVLSS*FEVNEASRCIYSQY 377
+SLY LKQAPKQ HEKFD + S+ F VNEA +C+Y +Y
Sbjct: 1048 KSLYGLKQAPKQWHEKFDTTLTSAGFVVNEADKCVYYRY 1086
Score = 23.1 bits (48), Expect(2) = 3e-06
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1
Query: 163 LEVH*MDVKTALLN 204
L VH MDVKTA LN
Sbjct: 1006 LLVHQMDVKTAFLN 1019