BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00027591
         (2667 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-l...  1018   0.0  
ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW...   991   0.0  
ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   975   0.0  
ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   973   0.0  
ref|XP_006340599.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   967   0.0  
ref|NP_001275776.1| ATP-dependent DNA helicase DDM1-like [Citrus...   961   0.0  
ref|XP_002310223.1| DECREASED DNA METHYLATION 1 family protein [...   961   0.0  
ref|XP_007046963.1| Chromatin remodeling 1 isoform 1 [Theobroma ...   960   0.0  
ref|XP_004232396.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   959   0.0  
ref|XP_007204642.1| hypothetical protein PRUPE_ppa001803mg [Prun...   958   0.0  
ref|XP_004289144.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   956   0.0  
ref|XP_002325643.2| DECREASED DNA METHYLATION 1 family protein [...   954   0.0  
gb|EXC35516.1| ATP-dependent DNA helicase DDM1 [Morus notabilis]      954   0.0  
ref|XP_006346947.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   949   0.0  
ref|XP_004233969.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   938   0.0  
ref|XP_006393870.1| hypothetical protein EUTSA_v10003684mg [Eutr...   937   0.0  
dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa]        931   0.0  
ref|XP_006590686.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   930   0.0  
ref|XP_006573583.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   928   0.0  
ref|XP_004512037.1| PREDICTED: ATP-dependent DNA helicase DDM1-l...   927   0.0  

>ref|XP_002267239.2| PREDICTED: ATP-dependent DNA helicase DDM1-like [Vitis vinifera]
          Length = 759

 Score = 1018 bits (2631), Expect = 0.0
 Identities = 523/759 (68%), Positives = 585/759 (77%), Gaps = 52/759 (6%)
 Frame = +3

Query: 54   ETKIDGSADSPTSVLEDEEMCKE------------------------------------- 122
            E K D SADSPTSVLEDE +C+E                                     
Sbjct: 6    EVKDDASADSPTSVLEDEGICEEKIKVKMEDDILHPLDAKNGDSSLISGTMAKEEEMLMK 65

Query: 123  ---------------APVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNE 257
                           AP L+++QFTKLDELLTQTQLYSEFLLEKMD ITFN      + +
Sbjct: 66   ERVKEEDAEQVVTQEAPHLNDSQFTKLDELLTQTQLYSEFLLEKMDSITFNRV----EEK 121

Query: 258  ESVXXXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXL 437
            ES                +YN RKA++AVAAML+RS+EG  PED NL            L
Sbjct: 122  ESEIVEVKKRGRGSKRKAEYNNRKAKRAVAAMLTRSKEGATPEDVNLTEEERAEKEQAGL 181

Query: 438  VPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPY 617
            VPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPY
Sbjct: 182  VPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPY 241

Query: 618  LVIAPLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEI 797
            LVIAPLSTLSNW NEI RF PSIN++IYHGN+ ER +IR KYMPR IGPKFPI++TSYE+
Sbjct: 242  LVIAPLSTLSNWANEIKRFVPSINAIIYHGNRKERDQIRMKYMPRTIGPKFPIILTSYEV 301

Query: 798  AMNDARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELW 977
            A+NDARK+LRHY+WKY+VVDEGHRLKN+KCKLL+ELK LP+ENKLLLTGTPLQNNLAELW
Sbjct: 302  ALNDARKYLRHYNWKYLVVDEGHRLKNSKCKLLKELKLLPVENKLLLTGTPLQNNLAELW 361

Query: 978  SLLNFILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRL 1157
            SLLNFILPDIFSSHEEFESWFDL GK  +              VV+KLHAILRPFLLRR+
Sbjct: 362  SLLNFILPDIFSSHEEFESWFDLSGKCNNEAVVEELEERKRAQVVSKLHAILRPFLLRRM 421

Query: 1158 KIEVEQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQ 1337
            K +VEQMLPRKKEIILY  MTEHQKN++DHL+NKTLEN+L EKA++   +K +LNNLM+Q
Sbjct: 422  KSDVEQMLPRKKEIILYATMTEHQKNFKDHLVNKTLENYLKEKASTGRGVKGKLNNLMVQ 481

Query: 1338 LRKNCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKV 1517
            LRKNCNHP LLES FD + LYPPVEQ++EQCGKF+LLDRLL +LFA+KHKVLIFSQWTK+
Sbjct: 482  LRKNCNHPDLLESAFDGSYLYPPVEQIVEQCGKFRLLDRLLARLFARKHKVLIFSQWTKI 541

Query: 1518 LDILDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAA 1697
            LDI++Y+FSEKGLEVCRIDG+V+LDERKRQI EFND +SN R+FLLSTRAGGLGINL AA
Sbjct: 542  LDIMEYYFSEKGLEVCRIDGSVRLDERKRQIEEFNDMNSNCRVFLLSTRAGGLGINLTAA 601

Query: 1698 DTCILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVV 1877
            DTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQS+EGRMLKRAFSKLKLEHVV
Sbjct: 602  DTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRMLKRAFSKLKLEHVV 661

Query: 1878 IGKGQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGD 2057
            IGKGQFQQER   N +DV+                 KLIQTDIS+EDL+RILDRSDLIGD
Sbjct: 662  IGKGQFQQERIKPN-MDVLEEEDLLQLLQDQEDSEDKLIQTDISEEDLDRILDRSDLIGD 720

Query: 2058 PSYDDDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
             S DD      + A PLKGPGWEV+ P  SGGMLSTLN+
Sbjct: 721  TSNDDGRSNSAADAFPLKGPGWEVMTPTASGGMLSTLNS 759


>ref|XP_002521606.1| ISWI chromatin remodeling complex ATPase ISW1, putative [Ricinus
            communis] gi|223539284|gb|EEF40877.1| ISWI chromatin
            remodeling complex ATPase ISW1, putative [Ricinus
            communis]
          Length = 788

 Score =  991 bits (2563), Expect = 0.0
 Identities = 517/759 (68%), Positives = 580/759 (76%), Gaps = 49/759 (6%)
 Frame = +3

Query: 45   ALTETKIDGSADSPTSVLEDEEMCKEAPV------------------------------- 131
            A +E K D SADSPTSVLEDEE CKE  V                               
Sbjct: 36   AESEMKNDASADSPTSVLEDEEKCKEKTVIDLEKDILLDAKNGDISLLSRAMAEEEEKLL 95

Query: 132  ------------------LSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNE 257
                              L++ QFTKLDELLTQTQLYSEFLLEKMD+IT NG  ++   E
Sbjct: 96   EARVKEEAEQGKEPEEAHLNDAQFTKLDELLTQTQLYSEFLLEKMDEITRNGVEHETGTE 155

Query: 258  ESVXXXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXL 437
             +                +YN+RKA +AVAAML+RSEE    EDANL            L
Sbjct: 156  TA--QKKRGRGSKRKAAAEYNSRKATRAVAAMLTRSEEVEKTEDANLTEEERLEKEQREL 213

Query: 438  VPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPY 617
            VPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTI FLAHLKG GLDGPY
Sbjct: 214  VPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTISFLAHLKGNGLDGPY 273

Query: 618  LVIAPLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEI 797
            LVIAPLSTLSNWVNEISRF PS+N++IYHG++ +R E+R+K+MPR+IG KFPI+ITSYEI
Sbjct: 274  LVIAPLSTLSNWVNEISRFAPSMNAIIYHGDKKQRDELRRKHMPRSIGSKFPIIITSYEI 333

Query: 798  AMNDARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELW 977
            A++DA+K+LRH++WKYVVVDEGHRLKN+KCKLL+ELK++PMENKLLLTGTPLQNNLAELW
Sbjct: 334  ALSDAKKYLRHFNWKYVVVDEGHRLKNSKCKLLKELKYIPMENKLLLTGTPLQNNLAELW 393

Query: 978  SLLNFILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRL 1157
            SLLNFILPDIF SHEEFESWFDL GK  S              V+AKLH ILRPFLLRRL
Sbjct: 394  SLLNFILPDIFQSHEEFESWFDLSGKASS-ESMEEVEEKRKAQVIAKLHGILRPFLLRRL 452

Query: 1158 KIEVEQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQ 1337
            K +VEQMLPRKKEIILY  +TEHQKN+QDHLINKTLE HL EK      +K +LNNLMIQ
Sbjct: 453  KADVEQMLPRKKEIILYATLTEHQKNFQDHLINKTLEKHLREKIGH--GMKGKLNNLMIQ 510

Query: 1338 LRKNCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKV 1517
            LRKNCNHP LLES FD +  YPPVEQ++EQCGKF+LL+RLL +LFA KHKVLIFSQWTK+
Sbjct: 511  LRKNCNHPDLLESAFDGSNFYPPVEQIVEQCGKFRLLERLLNRLFALKHKVLIFSQWTKI 570

Query: 1518 LDILDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAA 1697
            LDI+DY+FSEKGLEVCRIDG+VKLDERKRQI EFN+ DSN+RIFLLSTRAGGLGINL AA
Sbjct: 571  LDIMDYYFSEKGLEVCRIDGSVKLDERKRQIEEFNNVDSNYRIFLLSTRAGGLGINLTAA 630

Query: 1698 DTCILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVV 1877
            DTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQSVEGR+LKRAFSKLKLEHVV
Sbjct: 631  DTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVV 690

Query: 1878 IGKGQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGD 2057
            IGKGQF QER   NS+  +                 KLIQTDISDEDLERILDRSDL+G+
Sbjct: 691  IGKGQFHQERMKSNSIVDMEEEDILALLRNEETAEDKLIQTDISDEDLERILDRSDLVGN 750

Query: 2058 PSYDDDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
             + DD +      A+PLKGPGWEVV+P  +GGMLSTL++
Sbjct: 751  LA-DDKENDAVMDAIPLKGPGWEVVIPTATGGMLSTLSS 788


>ref|XP_004165151.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 828

 Score =  975 bits (2521), Expect = 0.0
 Identities = 502/756 (66%), Positives = 578/756 (76%), Gaps = 51/756 (6%)
 Frame = +3

Query: 60   KIDGSADSPTSVLEDEEMCK---------------------------------------- 119
            + D SA+SPTSVLEDE++C                                         
Sbjct: 79   RADNSAESPTSVLEDEDLCNGEKEIKLEEEIILEAKNGDSSLISKEMAEEEQKLLEARVK 138

Query: 120  -----------EAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESV 266
                       E+  LS+ QFTKLDELLTQTQLYSEFLLEKMDDITFN      ++++SV
Sbjct: 139  EEEAKRLEDSTESEKLSDNQFTKLDELLTQTQLYSEFLLEKMDDITFN---EMEEDKKSV 195

Query: 267  XXXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPL 446
                           +YN +KA++AVAAML+RS+EG   ED NL            LVPL
Sbjct: 196  EKSSGRGSKRKAAA-RYNNKKAKRAVAAMLTRSKEGEQDEDVNLTGEERIEKEQSELVPL 254

Query: 447  LTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVI 626
            LTGGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVI
Sbjct: 255  LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVI 314

Query: 627  APLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMN 806
            APLSTLSNW+NEISRF P++N++IYHG++ +R EIR+K MPR IGPKFPIV+TSYEIAM+
Sbjct: 315  APLSTLSNWINEISRFVPTVNAIIYHGDKKQRDEIRRKSMPRKIGPKFPIVVTSYEIAMS 374

Query: 807  DARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLL 986
            DARK LRHY+WKY+VVDEGHRLKN+KCKLL+ELK++ +ENKLLLTGTPLQNNLAELWSLL
Sbjct: 375  DARKVLRHYNWKYLVVDEGHRLKNSKCKLLKELKYITVENKLLLTGTPLQNNLAELWSLL 434

Query: 987  NFILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIE 1166
            NFILPD+FSS EEFESWFDL GK  +              VVAKLH ILRPFLLRR+K +
Sbjct: 435  NFILPDVFSSSEEFESWFDLSGKSHA-EEKEETQENRKAQVVAKLHGILRPFLLRRMKSD 493

Query: 1167 VEQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRK 1346
            VE MLPRKKEII+Y NMTE+QKN+Q+HL+NKTLENHL EK + RG  K +LNNLM+QLRK
Sbjct: 494  VELMLPRKKEIIMYANMTEYQKNFQEHLVNKTLENHLCEKGSGRG-FKGKLNNLMVQLRK 552

Query: 1347 NCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDI 1526
            NCNHP LLES FD +  YPPVEQL+EQCGKF+LLDRLLT+LF +KHKVLIFSQWTK+LDI
Sbjct: 553  NCNHPDLLESVFDDSYAYPPVEQLVEQCGKFRLLDRLLTRLFERKHKVLIFSQWTKILDI 612

Query: 1527 LDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTC 1706
            +DY+FSEKG EVCRIDG+VKLDERKRQI EFND +SN+RIF+LSTRAGGLGINL AADTC
Sbjct: 613  MDYYFSEKGFEVCRIDGSVKLDERKRQIQEFNDVNSNYRIFILSTRAGGLGINLTAADTC 672

Query: 1707 ILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGK 1886
            ILYDSDWNPQMDLQAMDRCHRIGQ++PVHVYRL TAQS+EGR+LKRAFSKLKLEHVVI K
Sbjct: 673  ILYDSDWNPQMDLQAMDRCHRIGQSKPVHVYRLATAQSIEGRILKRAFSKLKLEHVVIEK 732

Query: 1887 GQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSY 2066
            GQF QERT   + D++                 K+IQT+ISD DLERILDRSDLI     
Sbjct: 733  GQFHQERTKPTAADIVEEEDILALLREEDSAEDKMIQTEISDADLERILDRSDLIVPTGS 792

Query: 2067 DDDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
            D++    +    PLKGPGWEVV+PA++GG+LSTLN+
Sbjct: 793  DNEKSKVSGNLYPLKGPGWEVVIPASTGGVLSTLNS 828


>ref|XP_004149166.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Cucumis sativus]
          Length = 822

 Score =  973 bits (2516), Expect = 0.0
 Identities = 501/756 (66%), Positives = 578/756 (76%), Gaps = 51/756 (6%)
 Frame = +3

Query: 60   KIDGSADSPTSVLEDEEMCK---------------------------------------- 119
            + D SA+SPTSVLEDE++C                                         
Sbjct: 73   RADNSAESPTSVLEDEDLCNGEKEIKLEEEIILEAKNGDSSLISKEMAEEEQKLLEARVK 132

Query: 120  -----------EAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESV 266
                       E+  LS+ QFTKLDELLTQTQLYSEFLLEKMDDITF+      ++++SV
Sbjct: 133  EEEAKRLEDSTESEKLSDNQFTKLDELLTQTQLYSEFLLEKMDDITFS---EMEEDKKSV 189

Query: 267  XXXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPL 446
                           +YN +KA++AVAAML+RS+EG   ED NL            LVPL
Sbjct: 190  EKSSGRGSKRKAAA-RYNNKKAKRAVAAMLTRSKEGEQDEDVNLTGEERIEKEQSELVPL 248

Query: 447  LTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVI 626
            LTGGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVI
Sbjct: 249  LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVI 308

Query: 627  APLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMN 806
            APLSTLSNW+NEISRF P++N++IYHG++ +R EIR+K MPR IGPKFPIV+TSYEIAM+
Sbjct: 309  APLSTLSNWINEISRFVPTVNAIIYHGDKKQRDEIRRKSMPRKIGPKFPIVVTSYEIAMS 368

Query: 807  DARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLL 986
            DARK LRHY+WKY+VVDEGHRLKN+KCKLL+ELK++ +ENKLLLTGTPLQNNLAELWSLL
Sbjct: 369  DARKVLRHYNWKYLVVDEGHRLKNSKCKLLKELKYITVENKLLLTGTPLQNNLAELWSLL 428

Query: 987  NFILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIE 1166
            NFILPD+FSS EEFESWFDL GK  +              VVAKLH ILRPFLLRR+K +
Sbjct: 429  NFILPDVFSSSEEFESWFDLSGKSHA-EEKEETQENRKAQVVAKLHGILRPFLLRRMKSD 487

Query: 1167 VEQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRK 1346
            VE MLPRKKEII+Y NMTE+QKN+Q+HL+NKTLENHL EK + RG  K +LNNLM+QLRK
Sbjct: 488  VELMLPRKKEIIMYANMTEYQKNFQEHLVNKTLENHLCEKGSGRG-FKGKLNNLMVQLRK 546

Query: 1347 NCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDI 1526
            NCNHP LLES FD +  YPPVEQL+EQCGKF+LLDRLLT+LF +KHKVLIFSQWTK+LDI
Sbjct: 547  NCNHPDLLESVFDDSYAYPPVEQLVEQCGKFRLLDRLLTRLFERKHKVLIFSQWTKILDI 606

Query: 1527 LDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTC 1706
            +DY+FSEKG EVCRIDG+VKLDERKRQI EFND +SN+RIF+LSTRAGGLGINL AADTC
Sbjct: 607  MDYYFSEKGFEVCRIDGSVKLDERKRQIQEFNDVNSNYRIFILSTRAGGLGINLTAADTC 666

Query: 1707 ILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGK 1886
            ILYDSDWNPQMDLQAMDRCHRIGQ++PVHVYRL TAQS+EGR+LKRAFSKLKLEHVVI K
Sbjct: 667  ILYDSDWNPQMDLQAMDRCHRIGQSKPVHVYRLATAQSIEGRILKRAFSKLKLEHVVIEK 726

Query: 1887 GQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSY 2066
            GQF QERT   + D++                 K+IQT+ISD DLERILDRSDLI     
Sbjct: 727  GQFHQERTKPTAADIVEEEDILALLREEDSAEDKMIQTEISDADLERILDRSDLIVPTGS 786

Query: 2067 DDDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
            D++    +    PLKGPGWEVV+PA++GG+LSTLN+
Sbjct: 787  DNEKSKVSGNLYPLKGPGWEVVIPASTGGVLSTLNS 822


>ref|XP_006340599.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Solanum
            tuberosum] gi|565347157|ref|XP_006340600.1| PREDICTED:
            ATP-dependent DNA helicase DDM1-like isoform X2 [Solanum
            tuberosum]
          Length = 760

 Score =  967 bits (2500), Expect = 0.0
 Identities = 489/695 (70%), Positives = 563/695 (81%), Gaps = 3/695 (0%)
 Frame = +3

Query: 99   EDEEM--CKEAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESVXX 272
            E+E++   KEAP+L++TQFTKLDELLTQTQLYSEFLLEKMD+IT      +   E+SV  
Sbjct: 69   EEEQLNNLKEAPILNDTQFTKLDELLTQTQLYSEFLLEKMDNITTTNV--KEDEEKSVKE 126

Query: 273  XXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLLT 452
                       T  YN  KA++AVAAML+RS+E +  EDA L            LVPLLT
Sbjct: 127  NKKGRGAKRKATTSYNNNKAKRAVAAMLTRSKEDVPIEDATLTEEERFEKEQAELVPLLT 186

Query: 453  GGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIAP 632
            GGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTI FLAHLKG GLDGPYLVIAP
Sbjct: 187  GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLDGPYLVIAP 246

Query: 633  LSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMNDA 812
            LSTLSNW+NE+ RF PSIN++IYHG++ +R EIR K+MPR  GP FPIVITSYEIAM+DA
Sbjct: 247  LSTLSNWLNEMERFVPSINAIIYHGDKKQRDEIRMKHMPRTTGPNFPIVITSYEIAMSDA 306

Query: 813  RKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLNF 992
            RK LRHYSWKY+VVDEGHRLKN+KCKL++ELK LP+ENKLLLTGTPLQNNLAELWSLLNF
Sbjct: 307  RKFLRHYSWKYLVVDEGHRLKNSKCKLIKELKLLPIENKLLLTGTPLQNNLAELWSLLNF 366

Query: 993  ILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEVE 1172
            ILPDIFSSH+EFESWFDL GK  +              VVAKLHAILRPFLLRRLK++VE
Sbjct: 367  ILPDIFSSHDEFESWFDLSGKFSNESEKEEMEERRKAQVVAKLHAILRPFLLRRLKVDVE 426

Query: 1173 QMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRKNC 1352
            QMLPRKKEIILY  +T++QK +Q+HLIN+TLE +L+E  ++    K RLNNLMIQLRKNC
Sbjct: 427  QMLPRKKEIILYATLTDYQKKFQEHLINRTLEGYLIENVSTGNGFKGRLNNLMIQLRKNC 486

Query: 1353 NHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDILD 1532
            NHP LLES F+ +  YPPVEQ++EQCGKF+LLD+LL+KLFA+KHKVLIFSQWT+VLD++D
Sbjct: 487  NHPDLLESIFNGSNFYPPVEQIVEQCGKFRLLDQLLSKLFARKHKVLIFSQWTRVLDLMD 546

Query: 1533 YFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTCIL 1712
            Y+FSE+G +VCRIDG+VKLDERKRQI EFND  S FRIFLLSTRAGGLGINL AADTCIL
Sbjct: 547  YYFSERGFDVCRIDGSVKLDERKRQIKEFNDVSSKFRIFLLSTRAGGLGINLTAADTCIL 606

Query: 1713 YDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGKGQ 1892
            YDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TA SVEGR+LKRAFSKLKLEHVVIGKGQ
Sbjct: 607  YDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTALSVEGRILKRAFSKLKLEHVVIGKGQ 666

Query: 1893 FQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSYDD 2072
            F+QE +   S+DV                  KL+QTD+SDEDL+RILDRSDL+  P   +
Sbjct: 667  FKQEMSK-PSMDVTEEEDLLSLLRDRDSEEDKLVQTDVSDEDLQRILDRSDLLIRPPSGE 725

Query: 2073 DDEIKTSVAV-PLKGPGWEVVLPATSGGMLSTLNN 2174
            D + ++ V V PLKGPGWEVV+P  +GGMLSTLN+
Sbjct: 726  DGDAESCVNVLPLKGPGWEVVIPTATGGMLSTLNS 760


>ref|NP_001275776.1| ATP-dependent DNA helicase DDM1-like [Citrus sinensis]
            gi|567866139|ref|XP_006425692.1| hypothetical protein
            CICLE_v10024956mg [Citrus clementina]
            gi|568824798|ref|XP_006466781.1| PREDICTED: ATP-dependent
            DNA helicase DDM1-like [Citrus sinensis]
            gi|534305852|gb|AGU16985.1| chromatin-remodeling factor
            [Citrus sinensis] gi|557527682|gb|ESR38932.1|
            hypothetical protein CICLE_v10024956mg [Citrus
            clementina]
          Length = 759

 Score =  961 bits (2485), Expect = 0.0
 Identities = 496/755 (65%), Positives = 571/755 (75%), Gaps = 52/755 (6%)
 Frame = +3

Query: 66   DGSADSPTSVLEDEEMCK---EAPV----------------------------------- 131
            D SA+SPTSVLEDE++CK   EA +                                   
Sbjct: 11   DASAESPTSVLEDEDICKANIEAKMEEVVTLDAESNGTLLISKDMEEEEKKLLEARADEE 70

Query: 132  -------------LSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESVXX 272
                         L++ QF KLDELLTQTQ+Y+EFLLEKM+DIT NG     + E     
Sbjct: 71   NVEQENVSKNEAHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGV----EQESEPVG 126

Query: 273  XXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLLT 452
                         Q NTRKA++AVAAML+RS+EG   E+ NL            LVPLLT
Sbjct: 127  KKKGRGSKRKAAPQCNTRKAKRAVAAMLTRSKEGEKTENENLNEEERVDKEQRELVPLLT 186

Query: 453  GGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIAP 632
            GGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTI FLAHLKG GL GPYLVIAP
Sbjct: 187  GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 246

Query: 633  LSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMNDA 812
            LSTLSNWVNEISRF PS++++IYHG++ ER EIR+K+MPRAIGPKFPIV+TSYE+A++DA
Sbjct: 247  LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 306

Query: 813  RKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLNF 992
            RK+LRHY+WKY+VVDEGHRLKN KCKLL+ELK++P+ NKLLLTGTPLQNNLAELWSLL+F
Sbjct: 307  RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 366

Query: 993  ILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEVE 1172
            ILPDIFSS EEF+SWFDL GK  S              +VAKLHAILRPFLLRR+K +VE
Sbjct: 367  ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 426

Query: 1173 QMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRG-SIKVRLNNLMIQLRKN 1349
            QMLPRKKEIILY  MTEHQ+N+QDHLINKTLENHL EK  S G  +K +LNNLM+QLRKN
Sbjct: 427  QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 486

Query: 1350 CNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDIL 1529
            CNHP LLES F  +  YPPVEQ++EQCGKF+LLDRLL +LFA+ HKVL+FSQWTK+LDI+
Sbjct: 487  CNHPDLLESAFSDSCFYPPVEQIVEQCGKFRLLDRLLARLFARNHKVLVFSQWTKILDIM 546

Query: 1530 DYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTCI 1709
            +Y+FSEKG EVCRIDG+V+LDERK QI +FND +S++RIFLLSTRAGGLGINL AADTCI
Sbjct: 547  EYYFSEKGYEVCRIDGSVRLDERKIQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCI 606

Query: 1710 LYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGKG 1889
            LYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQSVEGR+LKRAFSKLKLEHVVIGKG
Sbjct: 607  LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKG 666

Query: 1890 QFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSYD 2069
            QF QERT  N +D +                 K+IQTDI +EDLER+LDR+DLI      
Sbjct: 667  QFHQERTKSNCIDALEEEDLLALLQDEETAEDKMIQTDIGEEDLERVLDRADLIA--GCL 724

Query: 2070 DDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
            DD+E   +   PLKGPGWEVV+P  +GGMLSTLN+
Sbjct: 725  DDEEKPNAAVYPLKGPGWEVVIPTATGGMLSTLNS 759


>ref|XP_002310223.1| DECREASED DNA METHYLATION 1 family protein [Populus trichocarpa]
            gi|222853126|gb|EEE90673.1| DECREASED DNA METHYLATION 1
            family protein [Populus trichocarpa]
          Length = 754

 Score =  961 bits (2483), Expect = 0.0
 Identities = 494/754 (65%), Positives = 567/754 (75%), Gaps = 48/754 (6%)
 Frame = +3

Query: 51   TETKIDGSADSPTSVLEDEEMCK------------------------------------- 119
            +E + +  ADSPTSVLEDEE CK                                     
Sbjct: 3    SEVENEAPADSPTSVLEDEEKCKIKEEVKLEEVIFVEAKNGDSSLISKSMAEEEEKLLNS 62

Query: 120  -----------EAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESV 266
                       EA  L+E+Q+T+LD+LLTQTQLYSEFLLE+MD IT NG     + E+  
Sbjct: 63   RIKEVQETVPEEAARLNESQYTRLDDLLTQTQLYSEFLLEQMDQITTNGV----EQEDEP 118

Query: 267  XXXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPL 446
                            YN+RKA++AV AML+RS+E    EDANL            LVPL
Sbjct: 119  AKQSRGRGSKRKAAALYNSRKAKRAVTAMLTRSKEVENAEDANLTEEERVEKEQRELVPL 178

Query: 447  LTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVI 626
            LTGG+LKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHL G GL+GPYLVI
Sbjct: 179  LTGGRLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLIGNGLNGPYLVI 238

Query: 627  APLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMN 806
            APLSTLSNWVNEISRF PS++++IYHGN+ +R EIR+K+MPR+IGPKFPI++TSYEIA++
Sbjct: 239  APLSTLSNWVNEISRFVPSMDAIIYHGNKKQRDEIRRKHMPRSIGPKFPIIVTSYEIALS 298

Query: 807  DARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLL 986
            DA+KHLRHY WKY+VVDEGHRLKN+KCKLL+ELK+L ++NKL+LTGTPLQNNLAELWSLL
Sbjct: 299  DAKKHLRHYPWKYLVVDEGHRLKNSKCKLLKELKYLCVDNKLILTGTPLQNNLAELWSLL 358

Query: 987  NFILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIE 1166
            NFILPDIF SHEEFESWFDL GK  +              VV KLHAILRPFLLRRLK +
Sbjct: 359  NFILPDIFQSHEEFESWFDLSGKCSNEAMKEEVEERRRAQVVVKLHAILRPFLLRRLKND 418

Query: 1167 VEQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRK 1346
            VEQMLPRKKEIILY  +TEHQK +QDHLINKTLE +L EK ++   +K RL NLM+QLRK
Sbjct: 419  VEQMLPRKKEIILYATLTEHQKKFQDHLINKTLEGYLREKMDTGRGMKGRLTNLMVQLRK 478

Query: 1347 NCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDI 1526
            NC HP LLES FD +  YPPVEQ++EQCGKF+LLD+LL +LFA KHKVLIFSQWTKVLDI
Sbjct: 479  NCYHPDLLESAFDGSYFYPPVEQIVEQCGKFRLLDKLLNRLFALKHKVLIFSQWTKVLDI 538

Query: 1527 LDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTC 1706
            +DY+FSEKG EVCRIDG+V LDERKRQI EFND +S +R+FLLSTRAGGLGINL +ADTC
Sbjct: 539  MDYYFSEKGFEVCRIDGSVNLDERKRQIEEFNDENSQYRVFLLSTRAGGLGINLTSADTC 598

Query: 1707 ILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGK 1886
            ILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQS+EGR+LKRAFSKLKLEHVVIGK
Sbjct: 599  ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRILKRAFSKLKLEHVVIGK 658

Query: 1887 GQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSY 2066
            GQF  E+T     +V+                 KLIQTDISDEDLERILDRSDL+   S 
Sbjct: 659  GQFHLEQTKSKGTEVMEEDDILALLRDEETAEDKLIQTDISDEDLERILDRSDLVVGSSD 718

Query: 2067 DDDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTL 2168
            DD + I  + + PLKGPGWEVV+P  +GGMLSTL
Sbjct: 719  DDTESIAATGSFPLKGPGWEVVIPNANGGMLSTL 752


>ref|XP_007046963.1| Chromatin remodeling 1 isoform 1 [Theobroma cacao]
            gi|508699224|gb|EOX91120.1| Chromatin remodeling 1
            isoform 1 [Theobroma cacao]
          Length = 754

 Score =  960 bits (2482), Expect = 0.0
 Identities = 495/751 (65%), Positives = 565/751 (75%), Gaps = 48/751 (6%)
 Frame = +3

Query: 66   DGSADSPTSVLEDEEMCKEAPV-------------------------------------- 131
            D SA+SPTSVLEDEE C+E  +                                      
Sbjct: 10   DASAESPTSVLEDEEKCEEEIIKLEEETILDAKNGDSSLLSGSMVKEEEKLMEARLKEET 69

Query: 132  ----------LSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESVXXXXX 281
                      L++TQFT+LDELLTQTQ+YSEFLLEKM+DITF GA    + E        
Sbjct: 70   KQEEPAEAVHLNDTQFTRLDELLTQTQMYSEFLLEKMEDITFIGA----EPEAEAPQKKR 125

Query: 282  XXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLLTGGK 461
                     NQYN RKA++AVAAML+RS+E    ED NL            LVPLLTGGK
Sbjct: 126  GRGSKRRAANQYNNRKAKRAVAAMLTRSKENEKTEDVNLTEEEKIEKEQRELVPLLTGGK 185

Query: 462  LKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIAPLST 641
            LKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTI FLAHLKG G+DGPYL+IAPLST
Sbjct: 186  LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGMDGPYLIIAPLST 245

Query: 642  LSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMNDARKH 821
            LSNW+NEI+RF PS+N++IYHGN+ ER EIR+K +P+ IGPKFPIV+TSYE+AM+DA+K 
Sbjct: 246  LSNWMNEIARFAPSMNAIIYHGNRKERDEIRRKLLPKVIGPKFPIVVTSYEMAMSDAKKC 305

Query: 822  LRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLNFILP 1001
            LRHY WKYVVVDEGHRLKN  CKL++ELKHL + NKLLLTGTPLQNNLAELWSLLNFILP
Sbjct: 306  LRHYEWKYVVVDEGHRLKNFNCKLVKELKHLHVGNKLLLTGTPLQNNLAELWSLLNFILP 365

Query: 1002 DIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEVEQML 1181
            DIF SHEEFESWFD  GK                 VVAKLHAILRPFLLRR+K +VEQML
Sbjct: 366  DIFQSHEEFESWFDFSGKINGEVSKEEMEEKRRNQVVAKLHAILRPFLLRRMKSDVEQML 425

Query: 1182 PRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRKNCNHP 1361
            PRKKEIILY ++TEHQKN+QDHL+N+TLE +L E+ +S   +K +LNNLMIQLRKNCNHP
Sbjct: 426  PRKKEIILYASLTEHQKNFQDHLLNQTLETYLRERIDSGRGVKGKLNNLMIQLRKNCNHP 485

Query: 1362 YLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDILDYFF 1541
             LLES FD + LYPPVEQ++EQCGKF LLDRLL +LF ++HKVLIFSQWTK+LDI+DY+F
Sbjct: 486  DLLESAFDGSYLYPPVEQIVEQCGKFCLLDRLLARLFERRHKVLIFSQWTKILDIMDYYF 545

Query: 1542 SEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTCILYDS 1721
            SEKG +VCRIDG+VKLDER+RQI EFND +SN RIF+LSTRAGGLGINL AADTCILYDS
Sbjct: 546  SEKGFKVCRIDGSVKLDERRRQIQEFNDENSNCRIFILSTRAGGLGINLTAADTCILYDS 605

Query: 1722 DWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGKGQFQQ 1901
            DWNPQMDLQAMDRCHRIGQT+PVHVYRL TA SVE R+LKRA+SKLKLEHVVIGKGQF Q
Sbjct: 606  DWNPQMDLQAMDRCHRIGQTKPVHVYRLATAHSVECRILKRAYSKLKLEHVVIGKGQFHQ 665

Query: 1902 ERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSYDDDDE 2081
            ER   N+L                    K+IQTDISDEDLER+LDRSDL+ +    +  +
Sbjct: 666  ERKPDNNL--WEEEDLLALLRDEETAEDKMIQTDISDEDLERLLDRSDLVTESDNGEKAK 723

Query: 2082 IKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
              T+ AVPLKGPGWEVVLP  SGGMLSTLN+
Sbjct: 724  AATADAVPLKGPGWEVVLPTGSGGMLSTLNS 754


>ref|XP_004232396.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Solanum
            lycopersicum]
          Length = 759

 Score =  959 bits (2478), Expect = 0.0
 Identities = 487/700 (69%), Positives = 560/700 (80%), Gaps = 4/700 (0%)
 Frame = +3

Query: 87   TSVLEDEEMC---KEAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNE 257
            T   E+EE     KE P+L++TQFTKLDELLTQTQLYSEFLLEKMD+IT    +   ++E
Sbjct: 64   TRAKEEEEQLNNLKEVPILNDTQFTKLDELLTQTQLYSEFLLEKMDNITTTKVM---EDE 120

Query: 258  ESVXXXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXL 437
            E                  YN  KA++AVAAML+RS+E +  EDA L            L
Sbjct: 121  EKSVKENKKGRGSKRKATSYNNNKAKRAVAAMLTRSKEDVPIEDATLTEEERFEKEQAEL 180

Query: 438  VPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPY 617
            VPLLTGGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTI FLAHLKG GL+GPY
Sbjct: 181  VPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLNGPY 240

Query: 618  LVIAPLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEI 797
            LVIAPLSTLSNW+NE+ RF PSI ++IYHG++ +R EIR K+MPR IGP FPIVITSYEI
Sbjct: 241  LVIAPLSTLSNWLNEMERFVPSIKAIIYHGDKKQRDEIRMKHMPRTIGPNFPIVITSYEI 300

Query: 798  AMNDARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELW 977
            AM+D+RK LRHYSWKY+VVDEGHRLKN+KCKLL+ELK LP+ENKLLLTGTPLQNNLAELW
Sbjct: 301  AMSDSRKFLRHYSWKYLVVDEGHRLKNSKCKLLKELKLLPIENKLLLTGTPLQNNLAELW 360

Query: 978  SLLNFILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRL 1157
            SLLNFILPDIFSSH+EFESWFDL GK  +              VVAKLHAILRPFLLRRL
Sbjct: 361  SLLNFILPDIFSSHDEFESWFDLSGKFSTESEKEEMEERRRAQVVAKLHAILRPFLLRRL 420

Query: 1158 KIEVEQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQ 1337
            K++VEQMLPRKKEIILY  +T++QK +Q+HLIN+TLE +L+E  ++    K RLNNLM+Q
Sbjct: 421  KVDVEQMLPRKKEIILYATLTDYQKKFQEHLINRTLEGYLIENVSTGNGFKGRLNNLMVQ 480

Query: 1338 LRKNCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKV 1517
            LRKNCNHP LLES F+ +  YPPVEQ++EQCGKF+LLDRLL+KLFA+KHKVLIFSQWT+V
Sbjct: 481  LRKNCNHPDLLESIFNSSNFYPPVEQIVEQCGKFRLLDRLLSKLFARKHKVLIFSQWTRV 540

Query: 1518 LDILDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAA 1697
            LD++DY+FSE+G +VCRIDG+VKLDERKRQI EFND  S +RIFLLSTRAGGLGINL AA
Sbjct: 541  LDLMDYYFSERGFDVCRIDGSVKLDERKRQIKEFNDVSSKYRIFLLSTRAGGLGINLTAA 600

Query: 1698 DTCILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVV 1877
            DTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TA SVEGR+LKRAFSKLKLEHVV
Sbjct: 601  DTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTALSVEGRILKRAFSKLKLEHVV 660

Query: 1878 IGKGQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGD 2057
            IGKGQF+QE +   S+DV                  KL+QTDISDEDL+RILDRSDL+  
Sbjct: 661  IGKGQFKQESSK-PSMDVTEEEDLLSLLRDQDSEEDKLVQTDISDEDLQRILDRSDLLIR 719

Query: 2058 PSYDDDDEIKTSVAV-PLKGPGWEVVLPATSGGMLSTLNN 2174
            P   +D   ++ V V PLKGPGWEVV+P  +GGMLSTLN+
Sbjct: 720  PPSGEDGNTESCVNVLPLKGPGWEVVIPTATGGMLSTLNS 759


>ref|XP_007204642.1| hypothetical protein PRUPE_ppa001803mg [Prunus persica]
            gi|462400173|gb|EMJ05841.1| hypothetical protein
            PRUPE_ppa001803mg [Prunus persica]
          Length = 763

 Score =  958 bits (2476), Expect = 0.0
 Identities = 484/695 (69%), Positives = 553/695 (79%), Gaps = 3/695 (0%)
 Frame = +3

Query: 99   EDEEMCKEAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESVXXXX 278
            E E   ++ P L+ TQ TKLDELLTQTQLYS+FLLEKMD+IT  GA  Q +  E      
Sbjct: 75   EKERAAEQLPNLNNTQITKLDELLTQTQLYSQFLLEKMDNITLIGAEQQTETVEE----K 130

Query: 279  XXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLLTGG 458
                     T  YN +KA++AV AML+RS+EG   ED +L            LVPLLTGG
Sbjct: 131  KGRGRKRKATATYNNKKAKRAVQAMLTRSKEGEKTEDVDLTEEERVEKEQKELVPLLTGG 190

Query: 459  KLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIAPLS 638
            +LKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKG GLDGPYLVIAPLS
Sbjct: 191  QLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGNGLDGPYLVIAPLS 250

Query: 639  TLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMNDARK 818
            TLSNWVNE SRFTPSI +++YHG++ +R EIR+K+MPRAIGP FPI++TSYE+AM DAR+
Sbjct: 251  TLSNWVNEFSRFTPSIKAIVYHGDKKQRDEIRRKHMPRAIGPNFPIIVTSYEVAMADARR 310

Query: 819  HLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLNFIL 998
             LRHY WKY+VVDEGHRLKN+KCKLL++LK LP+ENK+LLTGTPLQNNLAELWSLLNFIL
Sbjct: 311  FLRHYKWKYLVVDEGHRLKNSKCKLLQQLKFLPIENKILLTGTPLQNNLAELWSLLNFIL 370

Query: 999  PDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEVEQM 1178
            PDIFSSHEEFESWFDL GK                 +VAKLHAILRPFLLRR+K +VEQM
Sbjct: 371  PDIFSSHEEFESWFDLAGKCNGEAMMEELEEKRKAQMVAKLHAILRPFLLRRMKTDVEQM 430

Query: 1179 LPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRKNCNH 1358
            LPRKKEIILY +MTEHQK+ Q+HLINKTLEN+LLEK +    +K +LNNLM+QLRKNC H
Sbjct: 431  LPRKKEIILYASMTEHQKHLQEHLINKTLENYLLEKGDRVRGMKGKLNNLMVQLRKNCCH 490

Query: 1359 PYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDILDYF 1538
            P LLE+ FD +  YPPVEQ++EQCGKF LLDRLL +LFA+KHKV+IFSQWTK+LDI+DY+
Sbjct: 491  PDLLEAAFDGSYFYPPVEQMVEQCGKFSLLDRLLKRLFARKHKVIIFSQWTKILDIMDYY 550

Query: 1539 FSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTCILYD 1718
            F E G +VCRIDG+VKL+ERKRQIA FND DSN+RIFLLSTRAGGLGINL AADTCILYD
Sbjct: 551  FGEIGFQVCRIDGSVKLEERKRQIAVFNDVDSNYRIFLLSTRAGGLGINLTAADTCILYD 610

Query: 1719 SDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGKGQFQ 1898
            SDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQSVEGR+LKRAFSKLKLEHVVIGKGQF 
Sbjct: 611  SDWNPQMDLQAMDRCHRIGQTKPVHVYRLTTAQSVEGRILKRAFSKLKLEHVVIGKGQFH 670

Query: 1899 QERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSYDDDD 2078
            Q++      DV+                 K+IQT I+DEDLER+LDRSDL+  P  DD  
Sbjct: 671  QDKAKPGCTDVLEEDDLIALLREEESAEDKMIQTMITDEDLERVLDRSDLVVTP--DDHK 728

Query: 2079 EIK---TSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
            E K    + A+PLKGPGWEVVLP   GGML+TLN+
Sbjct: 729  EEKGDGIAGALPLKGPGWEVVLPTAGGGMLATLNS 763


>ref|XP_004289144.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Fragaria vesca
            subsp. vesca]
          Length = 725

 Score =  956 bits (2471), Expect = 0.0
 Identities = 495/735 (67%), Positives = 570/735 (77%), Gaps = 29/735 (3%)
 Frame = +3

Query: 57   TKIDGSADSPTSVLEDEEMC---------------------------KEAPVLSETQFTK 155
            TK + +ADSPTSVLE+E++C                           KE PVLSETQF+K
Sbjct: 3    TKTEPAADSPTSVLEEEDLCGEIDVKLVKAEEELLEVRVKEEETEREKETPVLSETQFSK 62

Query: 156  LDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNE-ESVXXXXXXXXXXXXXTNQYNTRKA 332
            LDELLT+TQL+++FLLEKMDDI+F+  V +  NE E V             T  YN  KA
Sbjct: 63   LDELLTKTQLFTDFLLEKMDDISFD--VPEQLNEPEPVQKKRGRGTKRKAPT--YNNTKA 118

Query: 333  QKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLLTGGKLKSYQIKGVKWLISLWQ 512
            ++AVAAML+RS+EG   ED NL            LVPLLTGGKLKSYQ+KGVKWLISLWQ
Sbjct: 119  KRAVAAMLTRSKEGEKIEDVNLTEEERLEKQQKELVPLLTGGKLKSYQLKGVKWLISLWQ 178

Query: 513  NGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIAPLSTLSNWVNEISRFTPSINS 692
            NGLNGILADQMGLGKTIQTIGFL+HLK  GLDGPYLVIAPLSTLSNW+NEISRFTPSI +
Sbjct: 179  NGLNGILADQMGLGKTIQTIGFLSHLKSMGLDGPYLVIAPLSTLSNWINEISRFTPSIKA 238

Query: 693  VIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMNDARKHLRHYSWKYVVVDEGHRL 872
            +IYHGN+ ER EI +K+MP+++GP FPI++TSYE+A+ DAR+ LRHY+WKY+VVDEGHRL
Sbjct: 239  IIYHGNKKERDEIIRKHMPKSVGPNFPIIVTSYEVALADARRCLRHYNWKYLVVDEGHRL 298

Query: 873  KNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLNFILPDIFSSHEEFESWFDLFG 1052
            KN+KCKL+++LK++P+ENK+LLTGTPLQNNLAELWSLLNFILPDIFSSHEEFESWFDL G
Sbjct: 299  KNSKCKLVQQLKYIPVENKILLTGTPLQNNLAELWSLLNFILPDIFSSHEEFESWFDLEG 358

Query: 1053 KGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEVEQMLPRKKEIILYVNMTEHQK 1232
            K  +              V+ KLHAILRPFLLRR+KI+VE MLPRKKEIILY  MTEHQK
Sbjct: 359  KCHNEAMKEELEEKRRAQVLPKLHAILRPFLLRRMKIDVELMLPRKKEIILYATMTEHQK 418

Query: 1233 NYQDHLINKTLENHL-LEKANSRGSIKVRLNNLMIQLRKNCNHPYLLESNFDWTTLYPPV 1409
             +Q+HLINKTLE HL LEK +    +K +LNNLMIQLRKNCNHP LLES FD +  YPPV
Sbjct: 419  KFQEHLINKTLEKHLILEKGSHVNGLKGKLNNLMIQLRKNCNHPDLLESAFDGSYFYPPV 478

Query: 1410 EQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDILDYFFSEKGLEVCRIDGTVKL 1589
            +Q++EQCGKF LL+RLL  L A KHKVLIFSQWTK+LDI+DY+FSEKG EVCRIDG VKL
Sbjct: 479  DQIVEQCGKFSLLERLLKLLLAGKHKVLIFSQWTKILDIMDYYFSEKGYEVCRIDGHVKL 538

Query: 1590 DERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTCILYDSDWNPQMDLQAMDRCHR 1769
            D+R+RQIA FND DS  RIFLLSTRAGGLGINL AADTCILYDSDWNPQMDLQAMDRCHR
Sbjct: 539  DDRRRQIASFNDLDSTCRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHR 598

Query: 1770 IGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGKGQFQQERTNINSLDVIXXXXX 1949
            IGQT+PVHVYRL TAQSVEGRMLKRAFSKLKLEHVVIGKG+F QER    + D +     
Sbjct: 599  IGQTKPVHVYRLATAQSVEGRMLKRAFSKLKLEHVVIGKGKFHQERAKPEA-DFLEEEDL 657

Query: 1950 XXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSYDDDDEIKTSVAVPLKGPGWEV 2129
                        K+IQTDI+DE+LE++LDRSDLIG P    D       A+PLKGPGWEV
Sbjct: 658  IALLRDEESAEDKMIQTDITDEELEKVLDRSDLIGTPPDAAD-------ALPLKGPGWEV 710

Query: 2130 VLPATSGGMLSTLNN 2174
            V+P  SGGMLS+LN+
Sbjct: 711  VVPTASGGMLSSLNS 725


>ref|XP_002325643.2| DECREASED DNA METHYLATION 1 family protein [Populus trichocarpa]
            gi|550317598|gb|EEF00025.2| DECREASED DNA METHYLATION 1
            family protein [Populus trichocarpa]
          Length = 749

 Score =  954 bits (2467), Expect = 0.0
 Identities = 496/753 (65%), Positives = 568/753 (75%), Gaps = 45/753 (5%)
 Frame = +3

Query: 51   TETKIDGSADSPTSVLEDEEMCK------------------------------------- 119
            +E K + SADSPTSVLEDEE C                                      
Sbjct: 3    SEVKSEASADSPTSVLEDEEQCNLKVEEEVFVEAKNGDASLISISMAEEEEKLLKSRMKE 62

Query: 120  --------EAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESVXXX 275
                    E   L E+QF +LD+LLTQTQLYSEFLLEK+D IT NGA    Q  E V   
Sbjct: 63   EEIEKAAAEEAQLDESQFNRLDQLLTQTQLYSEFLLEKIDQITANGA---EQESEPVEQK 119

Query: 276  XXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLLTG 455
                        QYN+RKA++AV AML+RS+E    EDANL            LVPLLTG
Sbjct: 120  KRGRGSKRKAAAQYNSRKAKRAVTAMLTRSKEVDKVEDANLTEEERAEKEQRELVPLLTG 179

Query: 456  GKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIAPL 635
            G+LKSYQIKGVKWLISLW NGLNGILADQMGLGKTIQTIGFLAHLKG GL+GPY+VIAPL
Sbjct: 180  GRLKSYQIKGVKWLISLWTNGLNGILADQMGLGKTIQTIGFLAHLKGNGLNGPYMVIAPL 239

Query: 636  STLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMNDAR 815
            STLSNWVNEISRF PS++S+IYHG++ +R EIR+K+MPR+IG KFPI++TSYEIA++DA+
Sbjct: 240  STLSNWVNEISRFAPSMDSIIYHGSKKQRDEIRRKHMPRSIGSKFPIIVTSYEIALSDAK 299

Query: 816  KHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLNFI 995
            K+LRHY WKYVVVDEGHRLKN+KCKLL+ELK+L ++NKLLLTGTPLQNNLAELWSLLNFI
Sbjct: 300  KYLRHYPWKYVVVDEGHRLKNSKCKLLKELKYLHVDNKLLLTGTPLQNNLAELWSLLNFI 359

Query: 996  LPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEVEQ 1175
            LPDIF SHEEFESWFDL GK  +               V KLHAILRPFLLRR+K +VEQ
Sbjct: 360  LPDIFQSHEEFESWFDLSGKCNNETMKEEVEERRRAQAVTKLHAILRPFLLRRMKTDVEQ 419

Query: 1176 MLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRKNCN 1355
            MLPRKKEIILY  +TEHQK +Q+HLINKTLE++L EK ++   +K RLNNLMIQLRKNC 
Sbjct: 420  MLPRKKEIILYATLTEHQKKFQEHLINKTLEDYLREKLDTGRGMKGRLNNLMIQLRKNCY 479

Query: 1356 HPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDILDY 1535
            HP LLES FD +  YPPVEQ++ +CGKFQLLDRLL +LFA +HKVLIFSQWTK+LDI+DY
Sbjct: 480  HPDLLESAFDGSYFYPPVEQIVGKCGKFQLLDRLLNRLFALQHKVLIFSQWTKILDIMDY 539

Query: 1536 FFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTCILY 1715
            +FSEKG EVCRIDG+VKLDERK+QI EFND +S FRIFLLSTRAGGLGIN  +ADTCILY
Sbjct: 540  YFSEKGFEVCRIDGSVKLDERKKQIQEFNDENSQFRIFLLSTRAGGLGINPTSADTCILY 599

Query: 1716 DSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGKGQF 1895
            DS  NPQMDLQAMDRCHRIGQT+PVHVYRL TAQSVEGR+LKRAFSKLKLEHVVIGKGQF
Sbjct: 600  DS--NPQMDLQAMDRCHRIGQTKPVHVYRLTTAQSVEGRILKRAFSKLKLEHVVIGKGQF 657

Query: 1896 QQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSYDDD 2075
             QERT     D++                 KLIQTDISDEDLER+LDRSDL+   S DD 
Sbjct: 658  HQERTKSTGTDLM-EEEMLALLRDEETAEDKLIQTDISDEDLERVLDRSDLVVGSSSDDI 716

Query: 2076 DEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
            + +  +V++PLKGPGWEVV+P  SGG+LSTLN+
Sbjct: 717  ENMAAAVSIPLKGPGWEVVVPTASGGVLSTLNS 749


>gb|EXC35516.1| ATP-dependent DNA helicase DDM1 [Morus notabilis]
          Length = 875

 Score =  954 bits (2465), Expect = 0.0
 Identities = 476/696 (68%), Positives = 556/696 (79%), Gaps = 4/696 (0%)
 Frame = +3

Query: 99   EDEEMCKE---APVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESVX 269
            E+EE+ KE   +  L++TQFTKLDELLT+TQ++SEFLLEKMDDI  +      Q  E+  
Sbjct: 183  EEEELKKEPDESANLNDTQFTKLDELLTKTQMFSEFLLEKMDDIMLDRV---EQEAETTE 239

Query: 270  XXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLL 449
                          QYNTRKA++AV AML+RS+E    ED +L            LVPLL
Sbjct: 240  KKKGLGGKRKKAATQYNTRKAKRAVQAMLTRSKESEEAEDTDLTEEERVEKEQRELVPLL 299

Query: 450  TGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIA 629
            TGGKLKSYQ+KG+KWLISLWQNGLNGILADQMGLGKTIQT+GFLAHLKGKG+DGPYLVIA
Sbjct: 300  TGGKLKSYQLKGIKWLISLWQNGLNGILADQMGLGKTIQTVGFLAHLKGKGMDGPYLVIA 359

Query: 630  PLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMND 809
            PLSTLSNWVNEISRFTPS+ ++IYHGN+ ER EIR+K+MP+ IGP+FPIVITSYE+A+ D
Sbjct: 360  PLSTLSNWVNEISRFTPSVKAIIYHGNKKERDEIRRKHMPKGIGPEFPIVITSYEVALAD 419

Query: 810  ARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLN 989
             RK LR+Y+WKYVVVDEGHRLKN++CKL +++K LPMENKLLLTGTPLQNNLAELWSLL+
Sbjct: 420  VRKSLRYYNWKYVVVDEGHRLKNSECKLFKQMKFLPMENKLLLTGTPLQNNLAELWSLLH 479

Query: 990  FILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEV 1169
            FILPDIFSS +EFESWFDL GK                 VVAKLHAILRPF+LRR+K +V
Sbjct: 480  FILPDIFSSLQEFESWFDLCGKCNGEVIKQELEEKRKTQVVAKLHAILRPFILRRMKSDV 539

Query: 1170 EQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIK-VRLNNLMIQLRK 1346
            E MLP+KKEIILY  MTEHQKN+QDHL+NKTLENHL EK  + G  + +++NNLMIQLRK
Sbjct: 540  ELMLPQKKEIILYATMTEHQKNFQDHLVNKTLENHLTEKWETGGGTRGMKINNLMIQLRK 599

Query: 1347 NCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDI 1526
            NCNHP LL+S FD +  YPPV+Q++ QCGKF+LL+RLLTKLFA KHK+LIFSQWTK+LDI
Sbjct: 600  NCNHPDLLQSAFDGSYQYPPVKQIVAQCGKFRLLERLLTKLFALKHKILIFSQWTKILDI 659

Query: 1527 LDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTC 1706
            +DY+F EKG EVCRIDG +KLDERKRQI EFN  +SN+RIFLLSTRAGGLGINL AADTC
Sbjct: 660  MDYYFCEKGFEVCRIDGNMKLDERKRQIEEFNHVNSNYRIFLLSTRAGGLGINLTAADTC 719

Query: 1707 ILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGK 1886
            ILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQS+EGRMLKRA+SKLKLEHVVIGK
Sbjct: 720  ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRMLKRAYSKLKLEHVVIGK 779

Query: 1887 GQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSY 2066
            GQFQ E+   N+ D +                 K++QTDIS+EDLE++LDRSDLI  P+ 
Sbjct: 780  GQFQLEKAKPNTKDTLEEEELLALLRDEETEEDKMVQTDISNEDLEKVLDRSDLIRKPTS 839

Query: 2067 DDDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
            D+D       A PLKGPGWEVV+P  +GGMLS+LN+
Sbjct: 840  DEDKTDGAGEAYPLKGPGWEVVIPNATGGMLSSLNS 875


>ref|XP_006346947.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X1 [Solanum
            tuberosum] gi|565360381|ref|XP_006346948.1| PREDICTED:
            ATP-dependent DNA helicase DDM1-like isoform X2 [Solanum
            tuberosum]
          Length = 754

 Score =  949 bits (2452), Expect = 0.0
 Identities = 483/686 (70%), Positives = 552/686 (80%)
 Frame = +3

Query: 117  KEAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESVXXXXXXXXXX 296
            KEAP L++ QF+KLDELLTQTQLYSEFLLEKMD+IT  G  ++ +  E            
Sbjct: 78   KEAPNLNDLQFSKLDELLTQTQLYSEFLLEKMDNITVAGVEDEEKGSED---KKRGRGRK 134

Query: 297  XXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLLTGGKLKSYQ 476
                  YN +KA++AVAAMLSRS+EG + ED+ L            LVPLLTGGKLKSYQ
Sbjct: 135  RKAETSYNNKKAKRAVAAMLSRSKEGGSVEDSTLTEEERADKEQAELVPLLTGGKLKSYQ 194

Query: 477  IKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIAPLSTLSNWV 656
            +KGVKWLISLWQNGLNGILADQMGLGKTIQTI FLAHLKG GLDGPYLVIAPLSTLSNW+
Sbjct: 195  LKGVKWLISLWQNGLNGILADQMGLGKTIQTISFLAHLKGNGLDGPYLVIAPLSTLSNWM 254

Query: 657  NEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMNDARKHLRHYS 836
            NEI RF PSIN++IYHG++ +R EIR+K+MPR IGPKFPIVITSYEIAM DA+K LRHY+
Sbjct: 255  NEIERFVPSINAIIYHGDKKQRDEIRRKHMPRTIGPKFPIVITSYEIAMFDAKKFLRHYT 314

Query: 837  WKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLNFILPDIFSS 1016
            WKY+VVDEGHRLKN+KCKL +ELK LP+ENKLLLTGTPLQNNLAELWSLLNFILPDIFSS
Sbjct: 315  WKYLVVDEGHRLKNSKCKLFKELKLLPIENKLLLTGTPLQNNLAELWSLLNFILPDIFSS 374

Query: 1017 HEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEVEQMLPRKKE 1196
             EEFESWFDL G+  +              VVAKLHAILRPFLLRRLK++VEQMLPRKKE
Sbjct: 375  LEEFESWFDLSGRCGNEAQKEEMEEKRRTQVVAKLHAILRPFLLRRLKVDVEQMLPRKKE 434

Query: 1197 IILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRKNCNHPYLLES 1376
            IILY  MTEHQK +QDHLIN+TLE +L E  +     + +L NLMIQLRKNCNHP LLES
Sbjct: 435  IILYATMTEHQKKFQDHLINQTLEGYLTENVSIGNHFRGKLTNLMIQLRKNCNHPDLLES 494

Query: 1377 NFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDILDYFFSEKGL 1556
             FD +  YPP+EQ++ QCGKF+LL+RLL++LFA+KHKVLIFSQWTKVLDI+DY+FSE+G 
Sbjct: 495  AFDGSYHYPPIEQIVGQCGKFRLLERLLSELFARKHKVLIFSQWTKVLDIMDYYFSERGF 554

Query: 1557 EVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTCILYDSDWNPQ 1736
            +VC+IDG VKLDERKRQI EFND +S  R+FLLSTRAGGLGINL AADTCILYDSDWNPQ
Sbjct: 555  DVCKIDGRVKLDERKRQIEEFNDINSECRVFLLSTRAGGLGINLTAADTCILYDSDWNPQ 614

Query: 1737 MDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGKGQFQQERTNI 1916
            MDLQAMDRCHRIGQT+PVHVYRL TA SVEGRMLKRAFSKLKLEHVVIGKGQF+QER   
Sbjct: 615  MDLQAMDRCHRIGQTKPVHVYRLATALSVEGRMLKRAFSKLKLEHVVIGKGQFKQER--- 671

Query: 1917 NSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSYDDDDEIKTSV 2096
            ++ D +                 +L QTDISDEDL+R+LDRSDL+  P+   +DE K +V
Sbjct: 672  STTDTVEEEDLLALLRDDDNEEDRLTQTDISDEDLQRVLDRSDLVVGPA--SEDESKVNV 729

Query: 2097 AVPLKGPGWEVVLPATSGGMLSTLNN 2174
            A PLKGPGW+VV+P  SGGMLSTLN+
Sbjct: 730  A-PLKGPGWDVVVPTASGGMLSTLNS 754


>ref|XP_004233969.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Solanum
            lycopersicum]
          Length = 771

 Score =  938 bits (2424), Expect = 0.0
 Identities = 475/686 (69%), Positives = 547/686 (79%)
 Frame = +3

Query: 117  KEAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESVXXXXXXXXXX 296
            KEAP L++ QF+KLDELLTQTQLYSEFLLEK+ +IT  G  ++ +  E            
Sbjct: 95   KEAPNLNDLQFSKLDELLTQTQLYSEFLLEKIINITMTGVKDEEEGSED---KKRGHGRK 151

Query: 297  XXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLLTGGKLKSYQ 476
                  YN +KA++AVAAMLSRS+EG + ED+ L            LVPLLTGGKLKSYQ
Sbjct: 152  RKGETSYNNKKAKRAVAAMLSRSKEGGSVEDSTLTEEERADKEQAELVPLLTGGKLKSYQ 211

Query: 477  IKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIAPLSTLSNWV 656
            +KGVKWLISLWQNGLNGILADQMGLGKTIQTI FLAHLKG GL GPYLVIAPLSTLSNW+
Sbjct: 212  LKGVKWLISLWQNGLNGILADQMGLGKTIQTISFLAHLKGNGLHGPYLVIAPLSTLSNWM 271

Query: 657  NEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMNDARKHLRHYS 836
            NEI RF PSIN++IYHGN+ +R EIR+K+MPR IGPKFPIV+TSYEIAM DA+K LRHY+
Sbjct: 272  NEIERFVPSINAIIYHGNKKQRDEIRRKHMPRTIGPKFPIVLTSYEIAMVDAKKFLRHYT 331

Query: 837  WKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLNFILPDIFSS 1016
            WKY+VVDEGHRLKN+KCKL +ELK LP+ENKLLLTGTPLQNNLAELWSLLNFILPDIFSS
Sbjct: 332  WKYLVVDEGHRLKNSKCKLFKELKLLPIENKLLLTGTPLQNNLAELWSLLNFILPDIFSS 391

Query: 1017 HEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEVEQMLPRKKE 1196
             EEFESWFDL G+  +              VVAKLHAILRPFLLRRLK++VEQMLPRKKE
Sbjct: 392  LEEFESWFDLSGRCGNEAQKEEVEEKRRTQVVAKLHAILRPFLLRRLKVDVEQMLPRKKE 451

Query: 1197 IILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRKNCNHPYLLES 1376
            IILY  MTEHQK +QDHLIN+TLE +L E  +     + +L NLMIQLRKNCNHP LLES
Sbjct: 452  IILYATMTEHQKKFQDHLINRTLEGYLTENVSLGNHFRGKLTNLMIQLRKNCNHPDLLES 511

Query: 1377 NFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDILDYFFSEKGL 1556
             FD +  YPP+EQ++ QCGKF LL+RLL++LFA+KHKVLIFSQWT+VLDI+DY+FSE+G 
Sbjct: 512  AFDGSYHYPPIEQIVGQCGKFCLLERLLSELFARKHKVLIFSQWTRVLDIMDYYFSERGF 571

Query: 1557 EVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTCILYDSDWNPQ 1736
            +VC+IDG VKLDER+RQI EFND +S  R+FLLSTRAGGLGINL AADTCILYDSDWNPQ
Sbjct: 572  DVCKIDGRVKLDERRRQIKEFNDVNSECRVFLLSTRAGGLGINLTAADTCILYDSDWNPQ 631

Query: 1737 MDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGKGQFQQERTNI 1916
            MDLQAMDRCHRIGQT+PVHVYRL TA SVEGRMLKRAFSKLKLEHVVIGKGQF+QER   
Sbjct: 632  MDLQAMDRCHRIGQTKPVHVYRLATALSVEGRMLKRAFSKLKLEHVVIGKGQFKQER--- 688

Query: 1917 NSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSYDDDDEIKTSV 2096
            ++ D +                 +L QTDISDEDL+RILDRSDL+   + +D+ ++    
Sbjct: 689  STTDTMEEEDLLTLLRDDDTEEDRLTQTDISDEDLQRILDRSDLVVGSASEDESKVN--- 745

Query: 2097 AVPLKGPGWEVVLPATSGGMLSTLNN 2174
             VPLKGPGW+VV+P  SGGMLSTLN+
Sbjct: 746  VVPLKGPGWDVVVPTASGGMLSTLNS 771


>ref|XP_006393870.1| hypothetical protein EUTSA_v10003684mg [Eutrema salsugineum]
            gi|557090509|gb|ESQ31156.1| hypothetical protein
            EUTSA_v10003684mg [Eutrema salsugineum]
          Length = 769

 Score =  937 bits (2421), Expect = 0.0
 Identities = 486/769 (63%), Positives = 567/769 (73%), Gaps = 50/769 (6%)
 Frame = +3

Query: 18   KDAPAETKNALTETKIDGSADSPTSVLEDEEMCKE------------------------- 122
            K APA    +  +T+ D S DSPTSVL +EE C+E                         
Sbjct: 8    KAAPASEMASDGKTEKDASGDSPTSVLSEEENCEEKKTATVAEEETLLALTGDSSLISEA 67

Query: 123  -------------------------APVLSETQFTKLDELLTQTQLYSEFLLEKMDDITF 227
                                      P L++TQFTKLDELLTQTQLYSEFLLEKM+DIT 
Sbjct: 68   MAQEEEQLLKIREDEEKAEFAVSGEVPTLNDTQFTKLDELLTQTQLYSEFLLEKMEDITK 127

Query: 228  NGAVNQNQNEESVXXXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXX 407
            NG   ++Q EE                +Q N  KA++AVAAM+SRS+EG    D++L   
Sbjct: 128  NGVEGESQKEEP---QKTGRGRKRKAASQCNNTKAKRAVAAMISRSKEGGQTLDSDLTDE 184

Query: 408  XXXXXXXXXLVPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAH 587
                     LVPLLTGGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTIGFL+H
Sbjct: 185  ERVMKEQSELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSH 244

Query: 588  LKGKGLDGPYLVIAPLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPK 767
            LKG GLDGPYLVIAPLSTLSNW NEI+RFTPSI+++IYHG++ ER E+R+K+MP+ +GPK
Sbjct: 245  LKGNGLDGPYLVIAPLSTLSNWKNEITRFTPSIDAIIYHGDKKERDELRRKHMPKTVGPK 304

Query: 768  FPIVITSYEIAMNDARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGT 947
            FPIVITSYE+AMNDA+K+LR Y WKYVV+DEGHRLKN+KCKLLREL++L MENKLLLTGT
Sbjct: 305  FPIVITSYEVAMNDAKKNLRQYPWKYVVIDEGHRLKNSKCKLLRELRYLKMENKLLLTGT 364

Query: 948  PLQNNLAELWSLLNFILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHA 1127
            PLQNNL+ELWSLLNFILPDIF+SH+EFESWFD  GK K+              VVAKLH 
Sbjct: 365  PLQNNLSELWSLLNFILPDIFASHDEFESWFDFSGKNKNEATKEEGEEKRSAQVVAKLHG 424

Query: 1128 ILRPFLLRRLKIEVEQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSI 1307
            ILRPF+LRR+K +VE  LPRKKEII+Y  MT+HQK +Q+HL+N+TLE HL E A      
Sbjct: 425  ILRPFILRRMKCDVELSLPRKKEIIIYATMTDHQKKFQEHLVNRTLEAHLGENAIRGQGW 484

Query: 1308 KVRLNNLMIQLRKNCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHK 1487
            K +LNNLMIQLRKNCNHP LL    + + LYPPVE ++ QCGKF+LL+RLL +LFAK H+
Sbjct: 485  KGKLNNLMIQLRKNCNHPDLLVGQIEGSYLYPPVEDIVGQCGKFRLLERLLVRLFAKNHR 544

Query: 1488 VLIFSQWTKVLDILDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRA 1667
            VLIFSQWTK+LDI+DY+FSEKG EVCRIDG+VKLDER+RQI EF+D  S+ RIFLLSTRA
Sbjct: 545  VLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIQEFSDEKSSCRIFLLSTRA 604

Query: 1668 GGLGINLAAADTCILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRA 1847
            GGLGINL AADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQS+EGR+LKRA
Sbjct: 605  GGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRILKRA 664

Query: 1848 FSKLKLEHVVIGKGQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLER 2027
            +SKLKLEHVVIGKGQF QER    S   +                 KLIQ DISDEDLER
Sbjct: 665  YSKLKLEHVVIGKGQFHQERA--KSSTPLEEDDILALLKDDETAEDKLIQADISDEDLER 722

Query: 2028 ILDRSDLIGDPSYDDDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
            +LDRSDL+  P    + E +   A P+KGPGWEVVLP+++GGMLS+LN+
Sbjct: 723  LLDRSDLMITP--PGETEPQAGEAFPVKGPGWEVVLPSSAGGMLSSLNS 769


>dbj|BAG30708.1| decrease in DNA methylation 1b [Brassica rapa]
          Length = 766

 Score =  931 bits (2405), Expect = 0.0
 Identities = 484/767 (63%), Positives = 564/767 (73%), Gaps = 47/767 (6%)
 Frame = +3

Query: 15   TKDAPAETKNALTETKIDGSADSPTSVLEDEEMCKEAPV--------------------- 131
            TK  P     +  +TK D SADS TSVL DEE  +E  V                     
Sbjct: 7    TKKTPVPVTASDEKTKKDASADSSTSVLSDEENSEEILVGKEILLAKDGDSSLISEAMAQ 66

Query: 132  -------------------------LSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGA 236
                                     L++TQFTKLDELLTQTQLYSEFLLEKM+DIT NG 
Sbjct: 67   EEEQLLKLREDEEKAKCAESGEATDLNDTQFTKLDELLTQTQLYSEFLLEKMEDITKNGI 126

Query: 237  VNQNQNEESVXXXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXX 416
              + Q  E                 Q  + KA+KAVAAM+SRS+EG    +++L      
Sbjct: 127  EGETQKAEP--EKKGGRGRKRKPATQAASMKAKKAVAAMISRSKEGHESANSDLTEEERV 184

Query: 417  XXXXXXLVPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKG 596
                  LVPLLTGGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTIGFL+HLKG
Sbjct: 185  MKEQSELVPLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKG 244

Query: 597  KGLDGPYLVIAPLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPI 776
             GLDGPYLVIAPLSTLSNW+NEI+RFTPSIN++IYHG++ +R E+R+K+MP+ +GPKFPI
Sbjct: 245  NGLDGPYLVIAPLSTLSNWMNEIARFTPSINAIIYHGDKKKRDELRRKHMPKTVGPKFPI 304

Query: 777  VITSYEIAMNDARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQ 956
            VITSYE+AMNDARK+LRHY WKYVV+DEGHRLKN +CKLLREL+H+ MENKLLLTGTPLQ
Sbjct: 305  VITSYEVAMNDARKNLRHYPWKYVVIDEGHRLKNHQCKLLRELRHMKMENKLLLTGTPLQ 364

Query: 957  NNLAELWSLLNFILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILR 1136
            NNL+ELWSLLNFILPDIF+SH+EFESWFD   K KS              VVAKLH+ILR
Sbjct: 365  NNLSELWSLLNFILPDIFASHDEFESWFDFSEKNKSEASKEEGEEKRKAQVVAKLHSILR 424

Query: 1137 PFLLRRLKIEVEQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVR 1316
            PF+LRR+K +VE +LPRKKEII+Y  MT+HQKN+QDHL+N+TLE HL E A      K +
Sbjct: 425  PFILRRMKCDVELLLPRKKEIIIYATMTDHQKNFQDHLVNRTLEAHLGENAIPGQGWKGK 484

Query: 1317 LNNLMIQLRKNCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLI 1496
            LNNL+IQLRKNCNHP LL    D +  YPP+E ++ QCGKF+LL+RLL +LFAK H+VL+
Sbjct: 485  LNNLVIQLRKNCNHPDLLAGQIDGSYFYPPIEDIVGQCGKFRLLERLLVRLFAKNHRVLV 544

Query: 1497 FSQWTKVLDILDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGL 1676
            F+QWTK+LDI+DY+FSEKG EVCRIDG VKLDER+RQI EFND  S+ RIFLLSTRAGGL
Sbjct: 545  FTQWTKILDIMDYYFSEKGFEVCRIDGNVKLDERRRQIDEFNDEKSSCRIFLLSTRAGGL 604

Query: 1677 GINLAAADTCILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSK 1856
            GINL AADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQS+EGR+LKRA+SK
Sbjct: 605  GINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSIEGRVLKRAYSK 664

Query: 1857 LKLEHVVIGKGQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILD 2036
            LKLEHVVIGKGQF QER    S   +                 KLIQTDIS+EDL+R+LD
Sbjct: 665  LKLEHVVIGKGQFHQERA--KSSIPLEEEDILALLKDDETAEDKLIQTDISEEDLDRLLD 722

Query: 2037 RSDL-IGDPSYDDDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
            RSDL I  P    + E +   A P+KGPGWEVVLP+++GGMLS+LN+
Sbjct: 723  RSDLMITSPG---ETEPEAGEAFPVKGPGWEVVLPSSAGGMLSSLNS 766


>ref|XP_006590686.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 763

 Score =  930 bits (2404), Expect = 0.0
 Identities = 477/724 (65%), Positives = 565/724 (78%), Gaps = 5/724 (0%)
 Frame = +3

Query: 15   TKDAPAETKNALTETKIDGSADSPTSVLEDEEM-CKEAPVLSETQFTKLDELLTQTQLYS 191
            T D   +  + +++T ++   +   + +++EE+ C+E P L++TQF KLDELLTQT+LYS
Sbjct: 40   TADIKDDGTSLISKTMVEEEENLIEARMKEEEVQCEEVPDLNDTQFNKLDELLTQTKLYS 99

Query: 192  EFLLEKMDDITFNGAVNQNQNEE--SVXXXXXXXXXXXXXTNQYNTRKAQKAVAAMLSRS 365
            EFLLEKMDDIT      +N+ E+  +               +QYNTRKA+KAV AML+RS
Sbjct: 100  EFLLEKMDDITLAVGEQENREEQESNPSAKKKGCGSKRKAASQYNTRKAKKAVTAMLTRS 159

Query: 366  EEGMAPEDANLXXXXXXXXXXXXLVPLLTGGKLKSYQIKGVKWLISLWQNGLNGILADQM 545
            EE    ED N+            L+PLLTGGKLK+YQ+KGVKWLISLWQNGLNGILADQM
Sbjct: 160  EESEKTEDTNMTEEERVEKEQKELMPLLTGGKLKTYQLKGVKWLISLWQNGLNGILADQM 219

Query: 546  GLGKTIQTIGFLAHLKGKGLDGPYLVIAPLSTLSNWVNEISRFTPSINSVIYHGNQNERG 725
            GLGKTIQTIGFL+HLK KGLDGPY++IAPLSTLSNWVNEISRF PS+ +VIYHG++ +R 
Sbjct: 220  GLGKTIQTIGFLSHLKAKGLDGPYMIIAPLSTLSNWVNEISRFAPSLPAVIYHGDKKQRD 279

Query: 726  EIRKKYMP-RAIGPKFPIVITSYEIAMNDARKHLRHYSWKYVVVDEGHRLKNTKCKLLRE 902
            EIR+K+MP R IGP+FPIVITSYEIA+NDA+K+ R Y+WKY+VVDEGHRLKN++CKL++ 
Sbjct: 280  EIRRKHMPTRTIGPEFPIVITSYEIALNDAKKYFRSYNWKYIVVDEGHRLKNSQCKLVKA 339

Query: 903  LKHLPMENKLLLTGTPLQNNLAELWSLLNFILPDIFSSHEEFESWFDLFGKGKSXXXXXX 1082
            LK + +ENKLLLTGTPLQNNLAELWSLLNFILPDIF+S EEFESWF+L GK  +      
Sbjct: 340  LKFINVENKLLLTGTPLQNNLAELWSLLNFILPDIFASLEEFESWFNLSGKCNNEATKEE 399

Query: 1083 XXXXXXXXVVAKLHAILRPFLLRRLKIEVEQMLPRKKEIILYVNMTEHQKNYQDHLINKT 1262
                    VVAKLHAILRPFLLRR+K +VE MLPRKKEII+Y NMTEHQKN QDHL+NKT
Sbjct: 400  LEEKRRSQVVAKLHAILRPFLLRRMKSDVEIMLPRKKEIIIYANMTEHQKNLQDHLVNKT 459

Query: 1263 LENHLLEKANSRGSIK-VRLNNLMIQLRKNCNHPYLLESNFDWTTLYPPVEQLLEQCGKF 1439
            L N+L E  +S  S+  + + NL IQLRK CNHP LLES FD + LYPP+E+++ QCGKF
Sbjct: 460  LGNYLKENMSSGLSVPAIMIRNLAIQLRKVCNHPDLLESAFDDSYLYPPLEEIVGQCGKF 519

Query: 1440 QLLDRLLTKLFAKKHKVLIFSQWTKVLDILDYFFSEKGLEVCRIDGTVKLDERKRQIAEF 1619
             LLDRLL +LF++ HKVLIFSQWTKVLDI+DY+FSEKG  VCRIDG+VKL+ERK+QI +F
Sbjct: 520  HLLDRLLQRLFSRNHKVLIFSQWTKVLDIMDYYFSEKGFAVCRIDGSVKLEERKQQIQDF 579

Query: 1620 NDPDSNFRIFLLSTRAGGLGINLAAADTCILYDSDWNPQMDLQAMDRCHRIGQTQPVHVY 1799
            ND +SN R+FLLSTRAGGLGINL  ADTCILYDSDWNPQMDLQAMDRCHRIGQT+PVHVY
Sbjct: 580  NDVNSNCRVFLLSTRAGGLGINLTVADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVY 639

Query: 1800 RLVTAQSVEGRMLKRAFSKLKLEHVVIGKGQFQQERTNINSLDVIXXXXXXXXXXXXXXX 1979
            RL TAQS+EGRMLKRAFSKLKLEHVVI KGQF QERT   S+D I               
Sbjct: 640  RLSTAQSIEGRMLKRAFSKLKLEHVVIEKGQFHQERTKPASMDEIEEDDVLALLRDEETA 699

Query: 1980 XXKLIQTDISDEDLERILDRSDLIGDPSYDDDDEIKTSVAVPLKGPGWEVVLPATSGGML 2159
              K I TDISDEDLE++LDRSDLI + S DD+ +   S A PLKGPGWEVV+P  +GGML
Sbjct: 700  EDKKIHTDISDEDLEKLLDRSDLIVNDSNDDNFKAPVS-AFPLKGPGWEVVIPTATGGML 758

Query: 2160 STLN 2171
            STLN
Sbjct: 759  STLN 762


>ref|XP_006573583.1| PREDICTED: ATP-dependent DNA helicase DDM1-like [Glycine max]
          Length = 762

 Score =  928 bits (2398), Expect = 0.0
 Identities = 486/753 (64%), Positives = 563/753 (74%), Gaps = 50/753 (6%)
 Frame = +3

Query: 66   DGSADSPTSVLEDEEMC------------------------------------------- 116
            D +A+SPTSVLEDE++C                                           
Sbjct: 11   DSAAESPTSVLEDEDVCALKEEVKLEEMVTADVKDDGSSLISKTMVEEEEKLLEARIKEE 70

Query: 117  ----KEAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNE-ESVXXXXX 281
                +EA  L++ QF KLDELLTQT+LYSEFLLEKMDDIT      +N+ E ES      
Sbjct: 71   EVQYEEAVDLNDIQFNKLDELLTQTRLYSEFLLEKMDDITLAVGEQENREEQESNPSAKK 130

Query: 282  XXXXXXXXTNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPLLTGGK 461
                     +QYNTRKA+KAVAAML+RS+E    ED N+            L+PLLTGGK
Sbjct: 131  GRGSKRKVASQYNTRKAKKAVAAMLTRSKESEKTEDMNMTEEERVEKEQKELMPLLTGGK 190

Query: 462  LKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVIAPLST 641
            LK+YQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTIGFL+HLK KGLDGPY++IAPLST
Sbjct: 191  LKNYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKAKGLDGPYMIIAPLST 250

Query: 642  LSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMP-RAIGPKFPIVITSYEIAMNDARK 818
            LSNWVNEISRF PS+ +VIYHG++ +R +IR+K+MP R IGP+FPIVITSYEIA+NDA+K
Sbjct: 251  LSNWVNEISRFAPSLPAVIYHGDKKQRDDIRRKHMPTRTIGPQFPIVITSYEIALNDAKK 310

Query: 819  HLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLLNFIL 998
            + R Y+WKY+VVDEGHRLKN++CKL++ LK + +ENKLLLTGTPLQNNLAELWSLLNFIL
Sbjct: 311  YFRSYNWKYLVVDEGHRLKNSQCKLVKALKFINVENKLLLTGTPLQNNLAELWSLLNFIL 370

Query: 999  PDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIEVEQM 1178
            PDIF+S EEFESWF+L GK  +              VVAKLHAILRPFLLRR+K +VE M
Sbjct: 371  PDIFASLEEFESWFNLSGKSNNGATKEELEEKRRSQVVAKLHAILRPFLLRRMKSDVEIM 430

Query: 1179 LPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKV-RLNNLMIQLRKNCN 1355
            LPRKKEII+Y NMTEHQKN QDHL+NKTL N+L E  +S  S+    + NL IQLRK CN
Sbjct: 431  LPRKKEIIIYANMTEHQKNLQDHLVNKTLGNYLKENMSSGRSVPAGMIRNLAIQLRKVCN 490

Query: 1356 HPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDILDY 1535
            HP LLES FD + LYPP+E+++ QCGKF LLDRLL +LFA+ HKVLIFSQWTKVLDI+DY
Sbjct: 491  HPDLLESAFDDSYLYPPLEEIVGQCGKFHLLDRLLQRLFARNHKVLIFSQWTKVLDIMDY 550

Query: 1536 FFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTCILY 1715
            +FSEKG EVCRIDG VKLDERK+QI +FND +SN R+FLLSTRAGGLGINL AADTCILY
Sbjct: 551  YFSEKGFEVCRIDGGVKLDERKQQIQDFNDVNSNCRVFLLSTRAGGLGINLTAADTCILY 610

Query: 1716 DSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGKGQF 1895
            DSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQS+EGRMLKRAFSKLKLEHVVI KGQF
Sbjct: 611  DSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIEGRMLKRAFSKLKLEHVVIEKGQF 670

Query: 1896 QQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSYDDD 2075
             QERT   S+D I                 K+I TDISDEDLE++LDRSDLI +   DD+
Sbjct: 671  HQERTKPASMDEIEEDDVLALLRDEETAEDKMIHTDISDEDLEKLLDRSDLIVNDFNDDN 730

Query: 2076 DEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
             +   SV  PLKGPGWEVV+P  +GGMLSTLN+
Sbjct: 731  FKAPVSV-FPLKGPGWEVVIPTATGGMLSTLNS 762


>ref|XP_004512037.1| PREDICTED: ATP-dependent DNA helicase DDM1-like isoform X2 [Cicer
            arietinum]
          Length = 748

 Score =  927 bits (2397), Expect = 0.0
 Identities = 471/696 (67%), Positives = 550/696 (79%), Gaps = 2/696 (0%)
 Frame = +3

Query: 93   VLEDEEMCKEAPVLSETQFTKLDELLTQTQLYSEFLLEKMDDITFNGAVNQNQNEESVXX 272
            V E++E C+EAP L++TQF KLDELLTQT+LYSEFLLEKMDDIT      + Q+EE    
Sbjct: 57   VEEEKEQCEEAPNLNDTQFNKLDELLTQTKLYSEFLLEKMDDITLTAGEQEKQDEEESQP 116

Query: 273  XXXXXXXXXXX--TNQYNTRKAQKAVAAMLSRSEEGMAPEDANLXXXXXXXXXXXXLVPL 446
                          +Q NTRKA++AV AM++RS+E +  ED NL            L+PL
Sbjct: 117  VAKKNGRGSKRKAASQCNTRKAKRAVEAMITRSKENVKTEDVNLSEEEKTEKEQKELMPL 176

Query: 447  LTGGKLKSYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPYLVI 626
            LTGGKLKSYQ+KGVKWLISLWQNGLNGILADQMGLGKTIQTIGFL+HL  KGL+GPY++I
Sbjct: 177  LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLIAKGLNGPYMII 236

Query: 627  APLSTLSNWVNEISRFTPSINSVIYHGNQNERGEIRKKYMPRAIGPKFPIVITSYEIAMN 806
            +PLSTLSNW+NEISRF PS+ ++IYHGN+ +R +IR+ +MPR +GPKFPIVITSYEIAMN
Sbjct: 237  SPLSTLSNWMNEISRFAPSLPAIIYHGNKQQRDDIRRNHMPRTVGPKFPIVITSYEIAMN 296

Query: 807  DARKHLRHYSWKYVVVDEGHRLKNTKCKLLRELKHLPMENKLLLTGTPLQNNLAELWSLL 986
            DA+K  R Y+WKY+VVDEGHRLKN+KCKL++ELK++ +ENKLLLTGTPLQNNLAELWSLL
Sbjct: 297  DAKKCFRSYNWKYLVVDEGHRLKNSKCKLVKELKYIKVENKLLLTGTPLQNNLAELWSLL 356

Query: 987  NFILPDIFSSHEEFESWFDLFGKGKSXXXXXXXXXXXXXXVVAKLHAILRPFLLRRLKIE 1166
            NFILPDIFSS EEFESWF+L GK  +              VVAKLHAILRPFLLRR+K +
Sbjct: 357  NFILPDIFSSLEEFESWFNLSGKSCNGATMEELEEKRRAQVVAKLHAILRPFLLRRMKSD 416

Query: 1167 VEQMLPRKKEIILYVNMTEHQKNYQDHLINKTLENHLLEKANSRGSIKVRLNNLMIQLRK 1346
            VE MLPRKKEII+Y NMTEHQK+ Q+HLIN+TL  +L +K  S G    +LNNL++QLRK
Sbjct: 417  VELMLPRKKEIIVYANMTEHQKSLQEHLINETLGKYLNDKL-SIGRSVTKLNNLVLQLRK 475

Query: 1347 NCNHPYLLESNFDWTTLYPPVEQLLEQCGKFQLLDRLLTKLFAKKHKVLIFSQWTKVLDI 1526
             CNHP LLES FD +  YPPV +++EQCGKF LL+RLL +LFA+ HKVLIFSQWT+VLDI
Sbjct: 476  VCNHPDLLESAFDRSYFYPPVNEIIEQCGKFHLLNRLLERLFARNHKVLIFSQWTRVLDI 535

Query: 1527 LDYFFSEKGLEVCRIDGTVKLDERKRQIAEFNDPDSNFRIFLLSTRAGGLGINLAAADTC 1706
            +DY+FSEKG EVCRIDG+VKL++RKRQI +FND +SN RIFLLSTRAGGLGINL AADTC
Sbjct: 536  MDYYFSEKGFEVCRIDGSVKLEDRKRQIQDFNDTNSNCRIFLLSTRAGGLGINLTAADTC 595

Query: 1707 ILYDSDWNPQMDLQAMDRCHRIGQTQPVHVYRLVTAQSVEGRMLKRAFSKLKLEHVVIGK 1886
            ILYDSDWNPQMDLQAMDRCHRIGQT+PVHVYRL TAQSVEGRMLKRAFSKLKLEHVVI K
Sbjct: 596  ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRMLKRAFSKLKLEHVVIEK 655

Query: 1887 GQFQQERTNINSLDVIXXXXXXXXXXXXXXXXXKLIQTDISDEDLERILDRSDLIGDPSY 2066
            GQF QERT    +D +                 K+IQ DISDEDLE+ILDRSDL+ + S 
Sbjct: 656  GQFHQERTKPAIVDEMEEEDVLALLRDEETAEDKMIQKDISDEDLEKILDRSDLVINGSG 715

Query: 2067 DDDDEIKTSVAVPLKGPGWEVVLPATSGGMLSTLNN 2174
            DD     T    PLKGPGWEVV+P  +GGMLSTLN+
Sbjct: 716  DDKAPAST---FPLKGPGWEVVIPTATGGMLSTLNS 748