BLASTX nr result
ID: Akebia25_contig00027346
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00027346
(1487 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 189 1e-91
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 189 1e-91
gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis] 179 3e-87
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr... 184 8e-85
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,... 182 2e-84
ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [A... 171 1e-83
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,... 174 1e-79
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165... 164 2e-77
ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutr... 165 1e-76
ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Caps... 162 1e-75
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu... 159 2e-74
ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD,... 154 6e-74
ref|XP_003599439.1| RNA polymerase sigma factor [Medicago trunca... 172 1e-72
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu... 153 1e-72
ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phas... 160 4e-72
ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD,... 156 1e-71
ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phas... 160 2e-71
ref|XP_003599441.1| RNA polymerase sigma factor [Medicago trunca... 172 2e-71
ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD,... 162 2e-70
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,... 145 4e-69
>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 426
Score = 189 bits (480), Expect(2) = 1e-91
Identities = 98/147 (66%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GS+CEM+AKI+EA T+LSRRL R PTY EIA+ I V VS VRLV ERSR+PIS+D+ +T
Sbjct: 268 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 327
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
+GC LQ IIPGPDE P+ MV +QLMKQ+V+ L TL ERE ILRL++G+NGETP S
Sbjct: 328 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 387
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQ 137
EEIGRL+ LSRER+RQI+ IAL+KLRQ
Sbjct: 388 EEIGRLMKLSRERVRQINSIALSKLRQ 414
Score = 176 bits (447), Expect(2) = 1e-91
Identities = 94/149 (63%), Positives = 106/149 (71%)
Frame = -3
Query: 1041 SIRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRS 862
S ++RS LT RE+A+F L LKE L QWAEA G+ + S
Sbjct: 121 SFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSN--QWAEAVGIKRSS 178
Query: 861 LERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKG 682
L++ LC RESRERI SYRRLVV IA YQGKGLSLQDLIQEGSIGLLRG ERFDP +G
Sbjct: 179 LDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRG 238
Query: 681 YKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
YKLSTYVYWWI+QAI+RAIANKSR+IRLP
Sbjct: 239 YKLSTYVYWWIRQAIVRAIANKSRIIRLP 267
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 189 bits (480), Expect(2) = 1e-91
Identities = 98/147 (66%), Positives = 119/147 (80%), Gaps = 1/147 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GS+CEM+AKI+EA T+LSRRL R PTY EIA+ I V VS VRLV ERSR+PIS+D+ +T
Sbjct: 161 GSICEMVAKIAEARTVLSRRLRRLPTYDEIAEFIDVNVSTVRLVSERSRTPISVDQAVTS 220
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
+GC LQ IIPGPDE P+ MV +QLMKQ+V+ L TL ERE ILRL++G+NGETP S
Sbjct: 221 QGCMTLQEIIPGPDETTPQKMVKRQLMKQEVERALNTLCEREAYILRLYFGINGETPLSF 280
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQ 137
EEIGRL+ LSRER+RQI+ IAL+KLRQ
Sbjct: 281 EEIGRLMKLSRERVRQINSIALSKLRQ 307
Score = 176 bits (447), Expect(2) = 1e-91
Identities = 94/149 (63%), Positives = 106/149 (71%)
Frame = -3
Query: 1041 SIRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRS 862
S ++RS LT RE+A+F L LKE L QWAEA G+ + S
Sbjct: 14 SFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSN--QWAEAVGIKRSS 71
Query: 861 LERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKG 682
L++ LC RESRERI SYRRLVV IA YQGKGLSLQDLIQEGSIGLLRG ERFDP +G
Sbjct: 72 LDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRG 131
Query: 681 YKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
YKLSTYVYWWI+QAI+RAIANKSR+IRLP
Sbjct: 132 YKLSTYVYWWIRQAIVRAIANKSRIIRLP 160
>gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 422
Score = 179 bits (455), Expect(2) = 3e-87
Identities = 94/148 (63%), Positives = 118/148 (79%), Gaps = 2/148 (1%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
G+MC ++AK++EAN +L++RL R PTY EIA + V VS VRLV ER R PIS+DR IT
Sbjct: 261 GNMCGIVAKVTEANNVLNKRLRRFPTYDEIAQVVGVHVSTVRLVSERIRPPISLDRAITE 320
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKT-LNEREELILRLHYGLNGETPRS 221
GC LQ IIPGP+E+ PE MV KQLMKQ+++ LLKT L++RE +LRLH+GL+G+ P S
Sbjct: 321 RGCMTLQEIIPGPEEISPEKMVRKQLMKQEIEKLLKTVLSDREANVLRLHFGLSGDIPLS 380
Query: 220 CEEIGRLLNLSRERIRQIHCIALTKLRQ 137
CEEIGRLL LSRERIRQI+ IAL+KL+Q
Sbjct: 381 CEEIGRLLKLSRERIRQINGIALSKLQQ 408
Score = 171 bits (433), Expect(2) = 3e-87
Identities = 112/278 (40%), Positives = 151/278 (54%), Gaps = 2/278 (0%)
Frame = -3
Query: 1422 SSPMATVSNHSPTLPTISLYSVPTKLSIRXXXXXXXXXXXXQKFGLSVVSEDLXXXXXXX 1243
++ M + +H P LPT+SL ++P K G+++VS D
Sbjct: 4 TTSMCSSPSHPPNLPTLSLPTIPAP--------------SPSKVGVNLVSNDALIVAAAA 49
Query: 1242 XXXXXXXXXXTDAVSSTITASIDGE--SGLESEDDTMVGIXXXXXXXXXKALEMSNLDSS 1069
A + A+ GE SG +S + TM K LE+ + D
Sbjct: 50 EAVTLARAAAKAARDALAEAASVGEVWSGNKSSELTM----RRKKRKRGKTLELLDTDEK 105
Query: 1068 SCDGLEPNWSIRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWA 889
S DG + +SI + YL+ RE+A+ L LKEG +L + A
Sbjct: 106 S-DGEDMRFSIGPMKLGYLSPREEAECCLILKEGAKLEATRLRMTNSEDHEPTSK--ELA 162
Query: 888 EAAGMNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRG 709
+A GM RS+++ LC RES+ERI+ SYRRLVV +A YQGKGLS DLIQEGS+GLLRG
Sbjct: 163 KAMGMEMRSIDKMLCDKRESQERISRSYRRLVVSVAAGYQGKGLSFPDLIQEGSVGLLRG 222
Query: 708 VERFDPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
++FDP++G KLSTYVYWWI+QAIIRAI NKSR++RLP
Sbjct: 223 AQKFDPQRGNKLSTYVYWWIRQAIIRAIENKSRVVRLP 260
>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
gi|557541154|gb|ESR52198.1| hypothetical protein
CICLE_v10033747mg [Citrus clementina]
Length = 436
Score = 184 bits (466), Expect(2) = 8e-85
Identities = 99/159 (62%), Positives = 123/159 (77%), Gaps = 1/159 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GSM M+AKI+EAN +LSRRL R PT +EIA+ + + VS VRL ER+R PIS+D IT
Sbjct: 278 GSMSGMVAKIAEANNVLSRRLRRMPTDNEIAEMLNIHVSTVRLAIERTRHPISLDGAITD 337
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
GC LQ IIPGPDE PE MV KQLMKQ+++ LL+TL+ERE ILRLH+GL+G+TP SC
Sbjct: 338 TGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSC 397
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 101
+EIGRLL LSRER+RQI IALTKL+Q + N +++MV
Sbjct: 398 KEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436
Score = 159 bits (401), Expect(2) = 8e-85
Identities = 84/143 (58%), Positives = 101/143 (70%)
Frame = -3
Query: 1023 SVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSLERTLC 844
++YLT E+A+ LKEG +L Q A+A GM + +++ LC
Sbjct: 137 NLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISK--QLAKATGMKQSKVDKILC 194
Query: 843 RARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKLSTY 664
+ RES+ERI SYR LVV IAT YQGKGLSL+DLIQEGSIGLLRG +RF+P++GYKLSTY
Sbjct: 195 KERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTY 254
Query: 663 VYWWIKQAIIRAIANKSRMIRLP 595
VYWWIKQAIIR IANKSR IRLP
Sbjct: 255 VYWWIKQAIIRTIANKSRTIRLP 277
>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Citrus sinensis]
Length = 436
Score = 182 bits (462), Expect(2) = 2e-84
Identities = 99/159 (62%), Positives = 122/159 (76%), Gaps = 1/159 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GSM M+AKI+EAN +LSRRL R PT EIA+ + + VS VRL ER+R PIS+D IT
Sbjct: 278 GSMSGMVAKIAEANNVLSRRLRRMPTDSEIAEMLNIHVSNVRLAIERTRHPISLDGAITD 337
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
GC LQ IIPGPDE PE MV KQLMKQ+++ LL+TL+ERE ILRLH+GL+G+TP SC
Sbjct: 338 TGCMTLQDIIPGPDETMPEKMVQKQLMKQELKELLQTLSEREADILRLHFGLDGQTPVSC 397
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 101
+EIGRLL LSRER+RQI IALTKL+Q + N +++MV
Sbjct: 398 KEIGRLLTLSRERVRQIRGIALTKLQQTNIRNNLKVYMV 436
Score = 159 bits (401), Expect(2) = 2e-84
Identities = 84/143 (58%), Positives = 101/143 (70%)
Frame = -3
Query: 1023 SVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSLERTLC 844
++YLT E+A+ LKEG +L Q A+A GM + +++ LC
Sbjct: 137 NLYLTPSEEAEICYSLKEGAKLEEARKTVAQAEEHESISK--QLAKATGMKQSKVDKILC 194
Query: 843 RARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKLSTY 664
+ RES+ERI SYR LVV IAT YQGKGLSL+DLIQEGSIGLLRG +RF+P++GYKLSTY
Sbjct: 195 KERESQERIIRSYRSLVVSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTY 254
Query: 663 VYWWIKQAIIRAIANKSRMIRLP 595
VYWWIKQAIIR IANKSR IRLP
Sbjct: 255 VYWWIKQAIIRTIANKSRTIRLP 277
>ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [Amborella trichopoda]
gi|548854777|gb|ERN12687.1| hypothetical protein
AMTR_s00025p00248060 [Amborella trichopoda]
Length = 449
Score = 171 bits (433), Expect(2) = 1e-83
Identities = 92/146 (63%), Positives = 105/146 (71%)
Frame = -3
Query: 1032 SSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSLER 853
SS YLT RE+A+FSL L+EG RL QWAEA GM + S+ER
Sbjct: 145 SSSEDYLTRREEAEFSLCLREGARLEGIRRKLREKRGREPSRG--QWAEAVGMRESSMER 202
Query: 852 TLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKL 673
L ARE R RIT SYRRLVV IAT+Y GKG+SL DLIQEGS+GLLRG ERFD ++GYKL
Sbjct: 203 RLGIARECRNRITNSYRRLVVSIATSYPGKGMSLSDLIQEGSLGLLRGAERFDHRRGYKL 262
Query: 672 STYVYWWIKQAIIRAIANKSRMIRLP 595
STYVYWWIKQAII+AIA KSR++RLP
Sbjct: 263 STYVYWWIKQAIIKAIATKSRIVRLP 288
Score = 167 bits (424), Expect(2) = 1e-83
Identities = 86/147 (58%), Positives = 112/147 (76%), Gaps = 1/147 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GSMC +AK+SEA+ +L RLGR+P+ EIA+ + +S VRLV ER R P+SID+ +
Sbjct: 289 GSMCATVAKVSEASGVLMSRLGRRPSQEEIAEKTGIALSRVRLVTERCRLPLSIDQPLGR 348
Query: 394 EG-CSILQIIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
G S+ II GP+E RPE MV ++ MK ++ LL+TL+EREE I+RL +G+NGETP+SC
Sbjct: 349 HGDISLKDIIAGPEETRPEEMVKREWMKGTMEMLLQTLSEREECIVRLQFGMNGETPKSC 408
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQ 137
+EIGRLLNLSRER+RQIH IAL KLRQ
Sbjct: 409 DEIGRLLNLSRERVRQIHYIALAKLRQ 435
>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 452
Score = 174 bits (442), Expect(2) = 1e-79
Identities = 88/147 (59%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
G MC ++AKI+ A ++R R P++ EIA+ I V SIVRLVCERSR P+S+DR +T
Sbjct: 294 GHMCGVMAKITRAKKNFNQRFQRLPSHDEIAEMINVQASIVRLVCERSRLPLSLDRVVTD 353
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
+GC LQ II GPDE+ PETM+ KQLMKQ+++ LL L++RE +LRLH+GLNG+TP+S
Sbjct: 354 QGCMALQDIIRGPDEMMPETMLKKQLMKQEMEKLLNRLSDREAEVLRLHFGLNGDTPQSF 413
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQ 137
EEIGRLL LSRER+RQI+ IAL+KL+Q
Sbjct: 414 EEIGRLLKLSRERVRQINSIALSKLKQ 440
Score = 151 bits (381), Expect(2) = 1e-79
Identities = 80/141 (56%), Positives = 98/141 (69%)
Frame = -3
Query: 1017 YLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSLERTLCRA 838
YL+ RE+A + LKEG +L Q A A + S+++ +C
Sbjct: 155 YLSPREEADCCMSLKEGAKLESERTRFTEAQEHEPTSK--QLANAMRIKMSSIDKVICNR 212
Query: 837 RESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKLSTYVY 658
RES+ERI SYR LVV +A++YQGKGLSLQDLIQEGSIGLLRG E+FDP++G KLSTYVY
Sbjct: 213 RESQERIIKSYRGLVVSVASSYQGKGLSLQDLIQEGSIGLLRGAEKFDPERGLKLSTYVY 272
Query: 657 WWIKQAIIRAIANKSRMIRLP 595
WWI+QAIIRAI NKSR+IRLP
Sbjct: 273 WWIRQAIIRAIENKSRIIRLP 293
>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
polymerase sigma factor sigD, chloroplastic; Short=Sigma
factor D; Short=Sigma-D; AltName: Full=RNA polymerase
sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
gi|9758039|dbj|BAB08700.1| sigma-like factor [Arabidopsis
thaliana] gi|332004550|gb|AED91933.1| sigma factor 4
[Arabidopsis thaliana]
Length = 419
Score = 164 bits (415), Expect(2) = 2e-77
Identities = 86/148 (58%), Positives = 102/148 (68%)
Frame = -3
Query: 1038 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSL 859
+ +SRS +L+ E+ Q LYLKEG +L A G KRS
Sbjct: 115 VGASRSGFLSRLEEVQLCLYLKEGAKLENLGTSVEENEMVSVLL-----ASGRGKKKRSA 169
Query: 858 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 679
LCR +E+RE+IT YRRLVV IAT YQGKGL+LQDLIQEGSIGLLRG ERFDP +GY
Sbjct: 170 NEILCRRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGY 229
Query: 678 KLSTYVYWWIKQAIIRAIANKSRMIRLP 595
KLSTYVYWWIKQAI+RAIA+KSR+++LP
Sbjct: 230 KLSTYVYWWIKQAILRAIAHKSRLVKLP 257
Score = 154 bits (388), Expect(2) = 2e-77
Identities = 80/148 (54%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GSM E+ AK++EA+ +L+R+L RQP+ EIA+ + + VS VRL ERSRSP+S+DR +
Sbjct: 258 GSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRLAVERSRSPVSLDRVASQ 317
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
G LQ I+ GPDE RPE MV ++ MK +++ LL +L RE +L L++GLNGETP S
Sbjct: 318 NGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSF 377
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQI 134
EEIG+ L LSRER+RQI+ IAL KLR +
Sbjct: 378 EEIGKSLKLSRERVRQINGIALKKLRNV 405
>ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum]
gi|557100961|gb|ESQ41324.1| hypothetical protein
EUTSA_v10013654mg [Eutrema salsugineum]
Length = 421
Score = 165 bits (418), Expect(2) = 1e-76
Identities = 86/148 (58%), Positives = 103/148 (69%)
Frame = -3
Query: 1038 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSL 859
+ +SRS +L+ E+ Q LYLKEG +L + G KRS
Sbjct: 117 VAASRSGFLSRLEEVQLCLYLKEGAKLENVGTSVEENEIVSVLL-----SSGKGKKKRSA 171
Query: 858 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 679
LCR RE+RE+IT YRRLVV IAT YQGKGL+LQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 172 NEILCRRREAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPERGY 231
Query: 678 KLSTYVYWWIKQAIIRAIANKSRMIRLP 595
KLSTYVYWWIKQAI+RAIA+KSR+++LP
Sbjct: 232 KLSTYVYWWIKQAILRAIAHKSRLVKLP 259
Score = 150 bits (379), Expect(2) = 1e-76
Identities = 79/148 (53%), Positives = 107/148 (72%), Gaps = 1/148 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GSM E+ AK++EA+ +L+R+L R P+ EIA+ + + VS VRL ER RSP+S+DR +
Sbjct: 260 GSMWELTAKVAEASNVLTRKLKRIPSCEEIAEHLNIHVSAVRLAVERGRSPVSLDRVASL 319
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
G LQ I+ GPDE RPE MV ++ MK +++ LL +L RE +L L++GLNGETP S
Sbjct: 320 NGRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLLGSLTARESRVLGLYFGLNGETPMSF 379
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQI 134
EEIG+ L LSRER+RQI+ IALTKLR +
Sbjct: 380 EEIGKSLKLSRERVRQINGIALTKLRNV 407
>ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Capsella rubella]
gi|482556540|gb|EOA20732.1| hypothetical protein
CARUB_v10001054mg [Capsella rubella]
Length = 419
Score = 162 bits (411), Expect(2) = 1e-75
Identities = 85/146 (58%), Positives = 101/146 (69%)
Frame = -3
Query: 1032 SSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSLER 853
+SRS +L+ E+ Q LYLKEG +L + G KRS
Sbjct: 117 ASRSGFLSRLEEVQLCLYLKEGAKLENLGTSAQENEMVSVLL-----SSGKGKKKRSANE 171
Query: 852 TLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGYKL 673
LCR +E+RE+IT YRRLVV IAT YQGKGL+LQDLIQEGSIGLLRG ERFDP +GYKL
Sbjct: 172 ILCRRKEAREKITRCYRRLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKL 231
Query: 672 STYVYWWIKQAIIRAIANKSRMIRLP 595
STYVYWWIKQAI+RAIA+KSR+++LP
Sbjct: 232 STYVYWWIKQAILRAIAHKSRLVKLP 257
Score = 149 bits (376), Expect(2) = 1e-75
Identities = 77/148 (52%), Positives = 108/148 (72%), Gaps = 1/148 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GSM E+ A+++EA+ +L+R+L RQP+ EIA+ + + VS VRL E+SRSP+S+DR +
Sbjct: 258 GSMWELTARVAEASNVLTRKLRRQPSCEEIAEHLNLHVSAVRLAVEKSRSPVSLDRVASQ 317
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
G LQ I+ GPDE RPE MV ++ +K +++ LL +L RE +L L++GLNGETP S
Sbjct: 318 NGRMTLQEIVRGPDETRPEEMVKREHIKNEIEQLLGSLTARESRVLGLYFGLNGETPMSF 377
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQI 134
EEIG+ L LSRER+RQI+ IAL KLR +
Sbjct: 378 EEIGKSLKLSRERVRQINGIALKKLRNV 405
>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331146|gb|ERP56881.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 159 bits (403), Expect(2) = 2e-74
Identities = 83/148 (56%), Positives = 104/148 (70%)
Frame = -3
Query: 1038 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSL 859
+ S + YL+ +E+A+FS+ LK R+ Q A+A M K S+
Sbjct: 118 LESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSK--QLAKALRMEKNSV 175
Query: 858 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 679
+ LC+ RESRE+I SYRRLVV IAT+YQ KGLSLQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 176 DNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGY 235
Query: 678 KLSTYVYWWIKQAIIRAIANKSRMIRLP 595
KLSTYVYWWIK+AI+ AI+N +RM+RLP
Sbjct: 236 KLSTYVYWWIKEAILTAISNNTRMVRLP 263
Score = 149 bits (375), Expect(2) = 2e-74
Identities = 81/142 (57%), Positives = 105/142 (73%), Gaps = 2/142 (1%)
Frame = -2
Query: 559 MLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITHEGCSI 380
++AKI+ AN LS +L R P+Y EIA + + VS VRL ER RSPIS+D+ + +
Sbjct: 269 LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNSLT 328
Query: 379 LQ-IIPGPDELRPETMVNKQLMKQQVQTLLKT-LNEREELILRLHYGLNGETPRSCEEIG 206
LQ IIPGPDE PE MV ++L+KQ+++ L +T L ERE ILRLH+GLNG+TP+SCEEIG
Sbjct: 329 LQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIG 388
Query: 205 RLLNLSRERIRQIHCIALTKLR 140
RL+ LSRER+RQI AL+KLR
Sbjct: 389 RLVKLSRERVRQIIGTALSKLR 410
>ref|XP_006345495.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Solanum tuberosum]
Length = 421
Score = 154 bits (389), Expect(2) = 6e-74
Identities = 82/148 (55%), Positives = 111/148 (75%), Gaps = 2/148 (1%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GS+ E++ KI ANT LSR+L R P+Y EIA+ + + VS VRLV ER+R+PISID+ +T
Sbjct: 262 GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQIVTS 321
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLL-KTLNEREELILRLHYGLNGETPRS 221
+G LQ II GP++ PE V +Q+MKQ ++ +L L +RE IL+LH+GLNG+ P+S
Sbjct: 322 QGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILHNVLCDREAKILKLHFGLNGDNPQS 381
Query: 220 CEEIGRLLNLSRERIRQIHCIALTKLRQ 137
EEIGR+L LSRERIRQI+C AL+KLR+
Sbjct: 382 FEEIGRVLKLSRERIRQINCTALSKLRE 409
Score = 152 bits (384), Expect(2) = 6e-74
Identities = 84/163 (51%), Positives = 109/163 (66%), Gaps = 4/163 (2%)
Frame = -3
Query: 1071 SSCDGLEPNWSIRSSRSV----YLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXX 904
S C +E I +S+ + YLT E+A++S YLKE R+
Sbjct: 101 SECLEMEKGDRILNSKPLKTGFYLTHEEEAKYSWYLKEEARIEILRKMVEETSEIDLSSK 160
Query: 903 XSQWAEAAGMNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSI 724
Q A+AAGM+ + L++ L A+ES+++I YR LVV +A +YQGKGLSLQDLIQEGSI
Sbjct: 161 --QLAKAAGMSTQRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSI 218
Query: 723 GLLRGVERFDPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
GLL G ++F+PKKGYKLSTY YWWI+QAI RA+ANKSR+IRLP
Sbjct: 219 GLLHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLP 261
>ref|XP_003599439.1| RNA polymerase sigma factor [Medicago truncatula]
gi|355488487|gb|AES69690.1| RNA polymerase sigma factor
[Medicago truncatula]
Length = 403
Score = 172 bits (436), Expect(2) = 1e-72
Identities = 94/147 (63%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
G M+AKI+EAN +L RRL R+PTY+EIA+ + V VS V+LV ERSR PIS+DR+IT
Sbjct: 245 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 304
Query: 394 EGCSIL-QIIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
+ IL +IIPGP E+ PE MV +QLMKQ V LL TL++REE I+RL++GLNGETP S
Sbjct: 305 QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 364
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQ 137
EEIG+LL LSRERIRQIH IAL+KL Q
Sbjct: 365 EEIGKLLKLSRERIRQIHGIALSKLEQ 391
Score = 130 bits (326), Expect(2) = 1e-72
Identities = 69/148 (46%), Positives = 92/148 (62%)
Frame = -3
Query: 1038 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSL 859
+ S S +L+S ++A+ L LKEG ++ + + S+
Sbjct: 104 VGSVTSGFLSSTDEAELCLCLKEGAKIEVAKQRMTEQEGNSAISRFT-------LENTSV 156
Query: 858 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 679
++ L R+S+ER+ YR LV IA YQGKGLS+QDLIQEG+IGLL G E+FDP +G
Sbjct: 157 DKVLINTRKSKERLARDYRGLVASIAAHYQGKGLSIQDLIQEGTIGLLHGAEKFDPNRGC 216
Query: 678 KLSTYVYWWIKQAIIRAIANKSRMIRLP 595
KLSTYVYWWIKQ II+A+A KSR+IRLP
Sbjct: 217 KLSTYVYWWIKQGIIKALAKKSRLIRLP 244
>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331145|gb|ERP56880.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 419
Score = 153 bits (386), Expect(2) = 1e-72
Identities = 81/146 (55%), Positives = 101/146 (69%)
Frame = -3
Query: 1038 IRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEAAGMNKRSL 859
+ S + YL+ +E+A+FS+ LK R+ Q A+A M K S+
Sbjct: 118 LESVKRGYLSPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSK--QLAKALRMEKNSV 175
Query: 858 ERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERFDPKKGY 679
+ LC+ RESRE+I SYRRLVV IAT+YQ KGLSLQDLIQEGSIGLLRG ERFDP++GY
Sbjct: 176 DNVLCKGRESREKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGY 235
Query: 678 KLSTYVYWWIKQAIIRAIANKSRMIR 601
KLSTYVYWWIK+AI+ AI+N +RM R
Sbjct: 236 KLSTYVYWWIKEAILTAISNNTRMRR 261
Score = 149 bits (375), Expect(2) = 1e-72
Identities = 81/142 (57%), Positives = 105/142 (73%), Gaps = 2/142 (1%)
Frame = -2
Query: 559 MLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITHEGCSI 380
++AKI+ AN LS +L R P+Y EIA + + VS VRL ER RSPIS+D+ + +
Sbjct: 265 LVAKIAGANNDLSNKLRRSPSYDEIAKVLNMKVSTVRLGFERGRSPISLDQAVLGQNSLT 324
Query: 379 LQ-IIPGPDELRPETMVNKQLMKQQVQTLLKT-LNEREELILRLHYGLNGETPRSCEEIG 206
LQ IIPGPDE PE MV ++L+KQ+++ L +T L ERE ILRLH+GLNG+TP+SCEEIG
Sbjct: 325 LQEIIPGPDETIPENMVKRELLKQELEKLFQTVLTEREAHILRLHFGLNGQTPQSCEEIG 384
Query: 205 RLLNLSRERIRQIHCIALTKLR 140
RL+ LSRER+RQI AL+KLR
Sbjct: 385 RLVKLSRERVRQIIGTALSKLR 406
>ref|XP_007148893.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
gi|561022157|gb|ESW20887.1| hypothetical protein
PHAVU_005G023100g [Phaseolus vulgaris]
Length = 366
Score = 160 bits (405), Expect(2) = 4e-72
Identities = 84/155 (54%), Positives = 116/155 (74%), Gaps = 1/155 (0%)
Frame = -2
Query: 562 EMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITHEGCS 383
EM+AK+++AN +LS RL R+PTY E A+ + V S +RLV E+SR PIS+D+ +T G
Sbjct: 212 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHM 271
Query: 382 ILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSCEEIG 206
LQ IIPGP+++ PE MV +QLMKQ+V LL TL++RE I+ L+YGLNGETP + +EIG
Sbjct: 272 TLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIG 331
Query: 205 RLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 101
++ LSRERIRQI+ IAL+KLRQ + N + ++V
Sbjct: 332 GMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 366
Score = 140 bits (352), Expect(2) = 4e-72
Identities = 76/166 (45%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Frame = -3
Query: 1089 MSNLDSSSCDGLEPNWSIRSSRSVYLTSREDAQFSLYLKEGT-RLXXXXXXXXXXXXXXX 913
+ N ++ S G +W YL+SRE+A+ L L+ + +
Sbjct: 50 IGNNENGSIVGFRKSW--------YLSSREEAELCLDLRVSSDKTQTPQQGAKSEVAKLI 101
Query: 912 XXXXSQWAEAAGMNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQE 733
+ + M+ SL++ LC ARES+ER+ YR LV IA Y GKGLSLQDLIQE
Sbjct: 102 TKGLEEHSAIPIMSLLSLDKALCNARESKERLANDYRGLVTSIAAGYLGKGLSLQDLIQE 161
Query: 732 GSIGLLRGVERFDPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
G++GLLRG E+F+P++GYKLSTYVYWWIKQA+I+AIA KSR++RLP
Sbjct: 162 GTVGLLRGAEKFEPERGYKLSTYVYWWIKQAMIKAIARKSRLVRLP 207
>ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Solanum lycopersicum]
Length = 442
Score = 156 bits (394), Expect(2) = 1e-71
Identities = 83/148 (56%), Positives = 113/148 (76%), Gaps = 2/148 (1%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
GS+ E++ KI ANT LSR+L R P+Y EIA+ + + VS VRLV ER+R+PISID+ +T
Sbjct: 283 GSISELVPKICNANTELSRKLRRMPSYDEIAEALGMDVSTVRLVIERNRAPISIDQIVTT 342
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKT-LNEREELILRLHYGLNGETPRS 221
+G LQ II GP++ PE V +Q+MKQ ++ +L+ L +RE IL+LH+GLNG+TP+S
Sbjct: 343 QGYMSLQNIISGPEDTTPEENVKRQMMKQDLEKILQNVLCDREAKILKLHFGLNGDTPQS 402
Query: 220 CEEIGRLLNLSRERIRQIHCIALTKLRQ 137
EEIGR+L LSRERIRQI+C AL+KLR+
Sbjct: 403 FEEIGRVLKLSRERIRQINCTALSKLRE 430
Score = 142 bits (359), Expect(2) = 1e-71
Identities = 69/101 (68%), Positives = 85/101 (84%)
Frame = -3
Query: 897 QWAEAAGMNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGL 718
Q A+AAGM+ R L++ L A+ES+++I YR LVV +A +YQGKGLSLQDLIQEGSIGL
Sbjct: 182 QLAKAAGMSTRRLDKLLINAKESQKKIIQCYRGLVVSVAASYQGKGLSLQDLIQEGSIGL 241
Query: 717 LRGVERFDPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
L G ++F+PKKGYKLSTY YWWI+QAI RA+ANKSR+IRLP
Sbjct: 242 LHGAKKFNPKKGYKLSTYAYWWIRQAISRAVANKSRVIRLP 282
>ref|XP_007148895.1| hypothetical protein PHAVU_005G023100g [Phaseolus vulgaris]
gi|561022159|gb|ESW20889.1| hypothetical protein
PHAVU_005G023100g [Phaseolus vulgaris]
Length = 367
Score = 160 bits (405), Expect(2) = 2e-71
Identities = 84/155 (54%), Positives = 116/155 (74%), Gaps = 1/155 (0%)
Frame = -2
Query: 562 EMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITHEGCS 383
EM+AK+++AN +LS RL R+PTY E A+ + V S +RLV E+SR PIS+D+ +T G
Sbjct: 213 EMVAKVAQANNILSSRLRRKPTYDETAEVLNVKASTIRLVSEKSRKPISLDKVVTDCGHM 272
Query: 382 ILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSCEEIG 206
LQ IIPGP+++ PE MV +QLMKQ+V LL TL++RE I+ L+YGLNGETP + +EIG
Sbjct: 273 TLQEIIPGPEDMTPEKMVKRQLMKQEVMKLLNTLSKREAEIVTLYYGLNGETPLTFKEIG 332
Query: 205 RLLNLSRERIRQIHCIALTKLRQILL*VN*RIHMV 101
++ LSRERIRQI+ IAL+KLRQ + N + ++V
Sbjct: 333 GMMQLSRERIRQINGIALSKLRQTSIIDNLKFYLV 367
Score = 138 bits (347), Expect(2) = 2e-71
Identities = 77/167 (46%), Positives = 102/167 (61%), Gaps = 2/167 (1%)
Frame = -3
Query: 1089 MSNLDSSSCDGLEPNWSIRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXX 910
+ N ++ S G +W YL+SRE+A+ L L+ +
Sbjct: 50 IGNNENGSIVGFRKSW--------YLSSREEAELCLDLRVSSDKTQTPQQQGAKSEVAKL 101
Query: 909 XXXSQWAEAAG--MNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQ 736
+A M+ SL++ LC ARES+ER+ YR LV IA Y GKGLSLQDLIQ
Sbjct: 102 ITKGLEEHSAIPIMSLLSLDKALCNARESKERLANDYRGLVTSIAAGYLGKGLSLQDLIQ 161
Query: 735 EGSIGLLRGVERFDPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
EG++GLLRG E+F+P++GYKLSTYVYWWIKQA+I+AIA KSR++RLP
Sbjct: 162 EGTVGLLRGAEKFEPERGYKLSTYVYWWIKQAMIKAIARKSRLVRLP 208
>ref|XP_003599441.1| RNA polymerase sigma factor [Medicago truncatula]
gi|355488489|gb|AES69692.1| RNA polymerase sigma factor
[Medicago truncatula]
Length = 267
Score = 172 bits (436), Expect(2) = 2e-71
Identities = 94/147 (63%), Positives = 115/147 (78%), Gaps = 1/147 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
G M+AKI+EAN +L RRL R+PTY+EIA+ + V VS V+LV ERSR PIS+DR+IT
Sbjct: 109 GEKYGMVAKIAEANNVLRRRLRRKPTYNEIAEVLNVNVSTVKLVSERSRQPISLDRSITD 168
Query: 394 EGCSIL-QIIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
+ IL +IIPGP E+ PE MV +QLMKQ V LL TL++REE I+RL++GLNGETP S
Sbjct: 169 QSNLILKEIIPGPVEMIPEKMVERQLMKQGVVKLLNTLDKREEEIVRLYFGLNGETPLSF 228
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQ 137
EEIG+LL LSRERIRQIH IAL+KL Q
Sbjct: 229 EEIGKLLKLSRERIRQIHGIALSKLEQ 255
Score = 125 bits (315), Expect(2) = 2e-71
Identities = 59/94 (62%), Positives = 73/94 (77%)
Frame = -3
Query: 876 MNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVERF 697
+ S+++ L R+S+ER+ YR LV IA YQGKGLS+QDLIQEG+IGLL G E+F
Sbjct: 15 LENTSVDKVLINTRKSKERLARDYRGLVASIAAHYQGKGLSIQDLIQEGTIGLLHGAEKF 74
Query: 696 DPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
DP +G KLSTYVYWWIKQ II+A+A KSR+IRLP
Sbjct: 75 DPNRGCKLSTYVYWWIKQGIIKALAKKSRLIRLP 108
>ref|XP_004499937.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cicer arietinum]
Length = 407
Score = 162 bits (411), Expect(2) = 2e-70
Identities = 87/150 (58%), Positives = 113/150 (75%), Gaps = 1/150 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
G M+ KI+EA +LS+RL R+PTY+E+A+ + V VSIV+LV ERSR PIS+D+ +
Sbjct: 249 GEKYGMVGKIAEAKNVLSKRLRRKPTYNEMAEVLNVNVSIVKLVSERSRQPISLDKAVFD 308
Query: 394 EG-CSILQIIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
+G ++ +I+PGP E+ PE MV +QL KQ V LL TLN+RE ILRL++GLNGETP S
Sbjct: 309 QGNLTLKEIMPGPVEMIPEKMVERQLKKQGVVKLLNTLNKREAEILRLYFGLNGETPLSF 368
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQILL 128
EEIG+ L LSRERIRQIH IAL+KL+Q L
Sbjct: 369 EEIGKQLKLSRERIRQIHGIALSKLQQTTL 398
Score = 132 bits (332), Expect(2) = 2e-70
Identities = 71/156 (45%), Positives = 93/156 (59%)
Frame = -3
Query: 1062 DGLEPNWSIRSSRSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXXXXXXXSQWAEA 883
+ ++ N+S +L+S E+A+ L LKEG R+ +
Sbjct: 99 ENIQNNFSREKELVGFLSSIEEAEICLGLKEGARIEVSKHRMTEHEGNSSI------SRR 152
Query: 882 AGMNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQEGSIGLLRGVE 703
SL++ L RES+ER+ YR LV IA YQGKGLS QDL QEG+IGLL G E
Sbjct: 153 LAHGNTSLDKVLSNTRESKERLAHEYRGLVASIAARYQGKGLSFQDLTQEGTIGLLHGAE 212
Query: 702 RFDPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
+FDP +G KLSTYVYWWIKQAI++A+A KSR++RLP
Sbjct: 213 KFDPNRGCKLSTYVYWWIKQAILKALARKSRLVRLP 248
>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 436
Score = 145 bits (367), Expect(2) = 4e-69
Identities = 102/287 (35%), Positives = 140/287 (48%), Gaps = 11/287 (3%)
Frame = -3
Query: 1422 SSPMATVSNHSPTLPTISLYSVPTKLSIRXXXXXXXXXXXXQKFGLSVVSEDLXXXXXXX 1243
+S + ++ SPTLP+ISL S+P+ + K G +++S D
Sbjct: 4 TSSLCSLPAQSPTLPSISLSSLPSLKTHLPQQPHFPFPPFSTKLGPNIISNDTLTLPPPP 63
Query: 1242 XXXXXXXXXXTDAVSSTITASIDGES------GLESEDDTMVGIXXXXXXXXXKALEMSN 1081
+A + G S +E +++ VG A +
Sbjct: 64 EAAVLAV----EAAGEHVLVEAKGFSEDWSSKNVEKMEESCVG-------DGTVAWKKKR 112
Query: 1080 LDSSSCDGL--EPNWSIRSS---RSVYLTSREDAQFSLYLKEGTRLXXXXXXXXXXXXXX 916
G+ E NW SS R YL+ +E+A+ L LKE L
Sbjct: 113 RKRRKEVGVKAEENWIALSSGPLRPGYLSPKEEAELCLCLKEAVLLENVKTRIMETQEHE 172
Query: 915 XXXXXSQWAEAAGMNKRSLERTLCRARESRERITLSYRRLVVWIATAYQGKGLSLQDLIQ 736
Q A A G ++R LCRARESR+R+ Y +LV+ IA YQGKGLSLQDL Q
Sbjct: 173 PTNK--QLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLVISIAAPYQGKGLSLQDLTQ 230
Query: 735 EGSIGLLRGVERFDPKKGYKLSTYVYWWIKQAIIRAIANKSRMIRLP 595
EG+IGLL+G ERF+P +G+KLSTY YWWI+QAIIRA+ KSR++RLP
Sbjct: 231 EGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKSRLVRLP 277
Score = 144 bits (364), Expect(2) = 4e-69
Identities = 75/147 (51%), Positives = 107/147 (72%), Gaps = 1/147 (0%)
Frame = -2
Query: 574 GSMCEMLAKISEANTLLSRRLGRQPTYHEIADTIQVGVSIVRLVCERSRSPISIDRTITH 395
G M +M+A+I+E N L +L R PT E+A++++V +S +RLV ERS+ PISI++ +
Sbjct: 278 GHMGQMVARIAEENNHLGIKLSRPPTNKEVAESLKVHLSTIRLVMERSKRPISINQPVND 337
Query: 394 EGCSILQ-IIPGPDELRPETMVNKQLMKQQVQTLLKTLNEREELILRLHYGLNGETPRSC 218
C LQ I+PGPD L PE MV ++LMKQ+++ LL TL++RE IL L++GLNGE P+S
Sbjct: 338 RSCLTLQEIMPGPDNLTPENMVMRKLMKQELKRLLNTLSKREARILSLYFGLNGEIPQSF 397
Query: 217 EEIGRLLNLSRERIRQIHCIALTKLRQ 137
EEIG+ LNLSRE IRQ + L+KL++
Sbjct: 398 EEIGKSLNLSRETIRQTNIATLSKLKK 424