BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00027342
         (463 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   206   4e-51
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   206   4e-51
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   198   7e-49
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   198   7e-49
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   195   5e-48
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   192   3e-47
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              192   3e-47
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   192   3e-47
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   192   4e-47
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   191   9e-47
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...   190   2e-46
ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   190   2e-46
ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   190   2e-46
ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago trunc...   190   2e-46
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     189   3e-46
ref|XP_004968861.1| PREDICTED: probable RNA-dependent RNA polyme...   188   6e-46
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    188   6e-46
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...   188   8e-46
gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]         187   1e-45
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     187   1e-45

>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  206 bits (523), Expect = 4e-51
 Identities = 94/153 (61%), Positives = 121/153 (79%)
 Frame = -2

Query: 459  DILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIV 280
            D+++S E++  P DV YD DLE+ G+EDFI  AW+ KCSY+GQL+ LLGQY V+ EEEIV
Sbjct: 1007 DMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIV 1066

Query: 279  TGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKA 100
            TGH+WS+P Y SRK G++KEK+K +Y  LKK+F+ +F N+G + +QLT DE NALYE+KA
Sbjct: 1067 TGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKA 1126

Query: 99   SAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            SAWYQV+YHP W+KKSLELR P   +A  MLSF
Sbjct: 1127 SAWYQVAYHPTWLKKSLELREPDAPEAVPMLSF 1159


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  206 bits (523), Expect = 4e-51
 Identities = 94/153 (61%), Positives = 121/153 (79%)
 Frame = -2

Query: 459  DILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIV 280
            D+++S E++  P DV YD DLE+ G+EDFI  AW+ KCSY+GQL+ LLGQY V+ EEEIV
Sbjct: 1007 DMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIV 1066

Query: 279  TGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKA 100
            TGH+WS+P Y SRK G++KEK+K +Y  LKK+F+ +F N+G + +QLT DE NALYE+KA
Sbjct: 1067 TGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKA 1126

Query: 99   SAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            SAWYQV+YHP W+KKSLELR P   +A  MLSF
Sbjct: 1127 SAWYQVAYHPTWLKKSLELREPDAPEAVPMLSF 1159


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  198 bits (503), Expect = 7e-49
 Identities = 89/153 (58%), Positives = 118/153 (77%)
 Frame = -2

Query: 459  DILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIV 280
            DI  SSE+   P D+ YDTDLE+P S DFI +AWN KCSY+GQLN LL QY V+ EEE+V
Sbjct: 1007 DISVSSEVDINPVDIHYDTDLEVPESVDFIADAWNQKCSYDGQLNGLLEQYKVNREEELV 1066

Query: 279  TGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKA 100
            TGH+WS+P YNSRK G++KE++K +Y  L+KEF+ +F  +  D + L+EDE NAL+E+KA
Sbjct: 1067 TGHIWSMPKYNSRKQGELKERLKHSYSALRKEFRQVFEKMDSDCELLSEDEKNALFERKA 1126

Query: 99   SAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            SAWYQV+YHP+WVKKSL+L+     ++  +LSF
Sbjct: 1127 SAWYQVTYHPEWVKKSLDLQEQDSARSVVLLSF 1159


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  198 bits (503), Expect = 7e-49
 Identities = 89/153 (58%), Positives = 115/153 (75%)
 Frame = -2

Query: 459  DILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIV 280
            D  +SSE++    D+PYD DLE+ GS D+I +AW+ KCSY+GQL  LL QY V  EEE+V
Sbjct: 1013 DAATSSELNLVRGDIPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVV 1072

Query: 279  TGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKA 100
            TGH+WS+P  NSRK G++KE++K +YH LKKEF+ +F  +  D +QLTEDE N LYEQKA
Sbjct: 1073 TGHIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKA 1132

Query: 99   SAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            SAWYQV+YHP+WV KS+EL+ P      +MLSF
Sbjct: 1133 SAWYQVAYHPKWVNKSMELQEPDAAGCASMLSF 1165


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  195 bits (496), Expect = 5e-48
 Identities = 87/153 (56%), Positives = 116/153 (75%)
 Frame = -2

Query: 459  DILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIV 280
            D+ +SSE++  P D+PYD+DLE+ G+ D+I +AW+ KCSY+GQLN LL QY V  EEE+V
Sbjct: 1010 DVAASSELNLVPGDIPYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVV 1069

Query: 279  TGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKA 100
            TGH+WS+P Y+SRK G++K+++K +Y+ LKKEF+ IF  +  + +QL + E N LYEQKA
Sbjct: 1070 TGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKA 1129

Query: 99   SAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            SAWYQV YHP WVKKSLEL+ P       MLSF
Sbjct: 1130 SAWYQVVYHPHWVKKSLELQDPDGAGTSVMLSF 1162


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  192 bits (489), Expect = 3e-47
 Identities = 85/149 (57%), Positives = 115/149 (77%)
 Frame = -2

Query: 447  SSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTGHV 268
            SS +   P+D+PYDT+LE+PG EDFID+AWN KCSY+GQLN LLGQY V+ EEE+VTGH+
Sbjct: 1011 SSGLEYVPKDIPYDTNLEIPGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHI 1070

Query: 267  WSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASAWY 88
            WS+P Y+++K G++KE++K AY++L+KEF+N+F  +  D   L  DE N +YE+KA AWY
Sbjct: 1071 WSMPKYSAKKQGELKERLKHAYNMLRKEFRNVFEQMEPDFDLLPIDEKNDMYERKAFAWY 1130

Query: 87   QVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            +V+YHP WV +SLEL+ P       MLSF
Sbjct: 1131 RVTYHPHWVTRSLELQLPDAVSNGVMLSF 1159


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  192 bits (489), Expect = 3e-47
 Identities = 90/144 (62%), Positives = 108/144 (75%)
 Frame = -2

Query: 459  DILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIV 280
            D+  SSE     + VP+D DL +PGS DFI++AW  KCSY+GQLN LLGQY V  EEE+V
Sbjct: 844  DVSESSEQIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVV 903

Query: 279  TGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKA 100
            TGHVWS+P Y SRK G++ E++K AY  LKKEF+ IF  +  D  QLT+DE N LYEQKA
Sbjct: 904  TGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKA 963

Query: 99   SAWYQVSYHPQWVKKSLELRAPGE 28
            SAWYQV+YHP WVKKSLEL+ P E
Sbjct: 964  SAWYQVTYHPTWVKKSLELQNPDE 987


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  192 bits (489), Expect = 3e-47
 Identities = 90/144 (62%), Positives = 108/144 (75%)
 Frame = -2

Query: 459  DILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIV 280
            D+  SSE     + VP+D DL +PGS DFI++AW  KCSY+GQLN LLGQY V  EEE+V
Sbjct: 1006 DVSESSEQIFGADKVPFDEDLGIPGSADFINDAWIHKCSYDGQLNGLLGQYKVKREEEVV 1065

Query: 279  TGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKA 100
            TGHVWS+P Y SRK G++ E++K AY  LKKEF+ IF  +  D  QLT+DE N LYEQKA
Sbjct: 1066 TGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNSDFDQLTDDEKNRLYEQKA 1125

Query: 99   SAWYQVSYHPQWVKKSLELRAPGE 28
            SAWYQV+YHP WVKKSLEL+ P E
Sbjct: 1126 SAWYQVTYHPTWVKKSLELQNPDE 1149


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  192 bits (488), Expect = 4e-47
 Identities = 84/149 (56%), Positives = 114/149 (76%)
 Frame = -2

Query: 447  SSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTGHV 268
            S+ +   P+D+PYDT LE+ GS  FID+AWN KCSY+GQLN LLGQY V+ EEE+VTGH+
Sbjct: 1011 SAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHI 1070

Query: 267  WSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASAWY 88
            WS+P Y+++K G++KE++K AY+ L+KEF+N+F  +  D   L +DE N +YE+KASAWY
Sbjct: 1071 WSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWY 1130

Query: 87   QVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            QV+YHP WV +SLEL+ P    +  MLSF
Sbjct: 1131 QVTYHPHWVARSLELQIPDAVSSTVMLSF 1159


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  191 bits (485), Expect = 9e-47
 Identities = 84/149 (56%), Positives = 114/149 (76%)
 Frame = -2

Query: 447  SSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTGHV 268
            SS +   P+D+PYDT++E+ G EDFID+AWN KCSY+GQLN LLGQY V+ EEE+VTGH+
Sbjct: 1012 SSGLEFVPKDIPYDTNIEILGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHI 1071

Query: 267  WSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASAWY 88
            WS+P Y+++K G++KE++K AY+ L+KEF+N+F  +  D   L  DE N +YE+KASAWY
Sbjct: 1072 WSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFEQMEPDFDMLPVDEKNDMYERKASAWY 1131

Query: 87   QVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            +V+YHP WV +SLEL+ P       MLSF
Sbjct: 1132 RVTYHPHWVTRSLELQLPDAVSNGVMLSF 1160


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score =  190 bits (483), Expect = 2e-46
 Identities = 89/153 (58%), Positives = 111/153 (72%)
 Frame = -2

Query: 459  DILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIV 280
            D  +SSE S  P  +PYD  LE+PG ED I  AW  KCSY+GQL  LLGQY V  EEEIV
Sbjct: 1006 DAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCSYDGQLIGLLGQYKVQKEEEIV 1065

Query: 279  TGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKA 100
            TGH+WS+P Y S+K G++KE++K +Y+ LKKEF+ +F     D + L+E+E N LYE+KA
Sbjct: 1066 TGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKA 1125

Query: 99   SAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            SAWY V+YHP+WVKKSLEL+ P E    AMLSF
Sbjct: 1126 SAWYHVTYHPEWVKKSLELQDPDESSHAAMLSF 1158


>ref|XP_004501325.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Cicer
            arietinum] gi|502132369|ref|XP_004501326.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X3 [Cicer
            arietinum]
          Length = 1201

 Score =  190 bits (482), Expect = 2e-46
 Identities = 86/158 (54%), Positives = 115/158 (72%), Gaps = 7/158 (4%)
 Frame = -2

Query: 453  LSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTG 274
            + + +++CA  D+ YDTDLE+PGS DFI +AW  KCSY+GQL+ LLGQY V TEEE+VTG
Sbjct: 1006 IDAPDLNCASSDIHYDTDLEVPGSADFISDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTG 1065

Query: 273  HVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASA 94
             +WS+P YNSRK G++KE++K +Y  LKKEF+  F  +  D  +L+++E N LYEQKASA
Sbjct: 1066 QIWSMPKYNSRKQGELKERLKHSYSALKKEFRQTFEKLNLDIGELSDEEKNLLYEQKASA 1125

Query: 93   WYQVSYHPQWVKKSLELRAPGEDKAPA-------MLSF 1
            WYQV+YHP+WVK+S +L+    D   A       MLSF
Sbjct: 1126 WYQVAYHPKWVKRSHDLKVKSSDNQEADSLGNMVMLSF 1163


>ref|XP_004501324.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Cicer
            arietinum]
          Length = 1247

 Score =  190 bits (482), Expect = 2e-46
 Identities = 86/158 (54%), Positives = 115/158 (72%), Gaps = 7/158 (4%)
 Frame = -2

Query: 453  LSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTG 274
            + + +++CA  D+ YDTDLE+PGS DFI +AW  KCSY+GQL+ LLGQY V TEEE+VTG
Sbjct: 1052 IDAPDLNCASSDIHYDTDLEVPGSADFISDAWYQKCSYDGQLSGLLGQYKVKTEEEVVTG 1111

Query: 273  HVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASA 94
             +WS+P YNSRK G++KE++K +Y  LKKEF+  F  +  D  +L+++E N LYEQKASA
Sbjct: 1112 QIWSMPKYNSRKQGELKERLKHSYSALKKEFRQTFEKLNLDIGELSDEEKNLLYEQKASA 1171

Query: 93   WYQVSYHPQWVKKSLELRAPGEDKAPA-------MLSF 1
            WYQV+YHP+WVK+S +L+    D   A       MLSF
Sbjct: 1172 WYQVAYHPKWVKRSHDLKVKSSDNQEADSLGNMVMLSF 1209


>ref|XP_003603409.1| Rna-dependent RNA polymerase [Medicago truncatula]
            gi|355492457|gb|AES73660.1| Rna-dependent RNA polymerase
            [Medicago truncatula]
          Length = 1188

 Score =  190 bits (482), Expect = 2e-46
 Identities = 87/158 (55%), Positives = 114/158 (72%), Gaps = 7/158 (4%)
 Frame = -2

Query: 453  LSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTG 274
            + + E +C   D+ YDTDLE+PGS +FI +AW  +CSY+GQL+ LLGQY V TEEE+VTG
Sbjct: 993  IDAPEFNCVSSDILYDTDLEVPGSSEFIADAWEQRCSYDGQLSGLLGQYKVKTEEEVVTG 1052

Query: 273  HVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASA 94
             +WS+P YNSRK G++KE++K +Y  LKKEF+ IF  +  D  +L++ E N LYEQKASA
Sbjct: 1053 QIWSMPKYNSRKQGELKERLKHSYSALKKEFRQIFEKLKSDVGELSDKEKNLLYEQKASA 1112

Query: 93   WYQVSYHPQWVKKSLELRAPGEDKAPA-------MLSF 1
            WYQV+YHP+WVKKSL+L+    D   A       MLSF
Sbjct: 1113 WYQVTYHPKWVKKSLDLQLKSSDNQSADSLGNMVMLSF 1150


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  189 bits (481), Expect = 3e-46
 Identities = 82/149 (55%), Positives = 114/149 (76%)
 Frame = -2

Query: 447  SSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTGHV 268
            S+ +   P D+PYD+ LE+PGS  FID+AWN KCSY+GQL+ LLGQY V+ EEE+VTGH+
Sbjct: 1011 SAGLELVPNDIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHI 1070

Query: 267  WSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASAWY 88
            WS+P Y+++K G++KE++K AY+ L+KEF+N+F  +  D   L +DE N +YE+KASAWY
Sbjct: 1071 WSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWY 1130

Query: 87   QVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            QV+Y+P WV +SLEL+ P    +  MLSF
Sbjct: 1131 QVTYNPHWVARSLELQLPDAVSSTVMLSF 1159


>ref|XP_004968861.1| PREDICTED: probable RNA-dependent RNA polymerase SHL2-like [Setaria
            italica]
          Length = 1211

 Score =  188 bits (478), Expect = 6e-46
 Identities = 84/147 (57%), Positives = 112/147 (76%)
 Frame = -2

Query: 441  EISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTGHVWS 262
            E +C   D+PYDTD+E+PG+ DF+ +AW  KCSYE QLNALL QY V TE E+VT H+WS
Sbjct: 1027 EETCTLNDLPYDTDMEVPGATDFLSSAWLCKCSYEAQLNALLNQYGVRTEAELVTEHIWS 1086

Query: 261  LPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASAWYQV 82
            LP Y+SRK GDIKE++K++Y  L+KE ++ F +I  D  +++EDE N +YE KASAWYQV
Sbjct: 1087 LPKYSSRKQGDIKERLKNSYSALRKELRSTFESIETDETEISEDEKNRVYEMKASAWYQV 1146

Query: 81   SYHPQWVKKSLELRAPGEDKAPAMLSF 1
            +YHP+WV+KS E+  P  ++ PA LSF
Sbjct: 1147 TYHPKWVQKSREMLGPDCEEMPARLSF 1173


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  188 bits (478), Expect = 6e-46
 Identities = 82/149 (55%), Positives = 114/149 (76%)
 Frame = -2

Query: 447  SSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTGHV 268
            S+ +   P+D+PYDT L +PGS  FID+AWN KCSY+GQL+ LLGQY V+ EEE+VTGH+
Sbjct: 1011 SAGLEVVPKDIPYDTTLVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHI 1070

Query: 267  WSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASAWY 88
            WS+P Y+++K G++KE++K AY+ L+KEF+N+F  +  D   L +DE N +YE+KASAWY
Sbjct: 1071 WSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWY 1130

Query: 87   QVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            QV+Y+P WV +SLEL+ P    +  MLSF
Sbjct: 1131 QVTYNPHWVARSLELQLPDAISSTVMLSF 1159


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
            gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
            Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
            AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
            Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
            Full=RNA-directed RNA polymerase 6
            gi|12324444|gb|AAG52184.1|AC012329_11 putative
            RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
            thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
            polymerase-like protein [Arabidopsis thaliana]
            gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
            gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
            6 [Arabidopsis thaliana]
          Length = 1196

 Score =  188 bits (477), Expect = 8e-46
 Identities = 88/153 (57%), Positives = 110/153 (71%)
 Frame = -2

Query: 459  DILSSSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIV 280
            D  +SSE S  P  +PYD  LE+PG ED I  AW  KC Y+GQL  LLGQY V  EEEIV
Sbjct: 1006 DAEASSEESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIV 1065

Query: 279  TGHVWSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKA 100
            TGH+WS+P Y S+K G++KE++K +Y+ LKKEF+ +F     D + L+E+E N LYE+KA
Sbjct: 1066 TGHIWSMPKYTSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKA 1125

Query: 99   SAWYQVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            SAWY V+YHP+WVKKSLEL+ P E    AMLSF
Sbjct: 1126 SAWYHVTYHPEWVKKSLELQDPDESSHAAMLSF 1158


>gb|AHO49120.1| RNA-dependent RNA polymerase 6 [Carica papaya]
          Length = 1195

 Score =  187 bits (476), Expect = 1e-45
 Identities = 88/140 (62%), Positives = 107/140 (76%)
 Frame = -2

Query: 420  DVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTGHVWSLPTYNSR 241
            D+PYDTDL+ PGS  F+ +AW  KC Y+ QL +LLGQY V  EEEIVTGHVWS+P Y SR
Sbjct: 1018 DIPYDTDLDKPGSAGFLLDAWAQKCLYDWQLTSLLGQYKVKREEEIVTGHVWSMPRYTSR 1077

Query: 240  KHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASAWYQVSYHPQWV 61
            K G++KE++K +Y VLKKEF+ IF N+  + +QLTEDE N LYEQKASAWYQV YHP+WV
Sbjct: 1078 KEGELKERLKHSYSVLKKEFRQIFENMHPEFEQLTEDEKNILYEQKASAWYQVCYHPKWV 1137

Query: 60   KKSLELRAPGEDKAPAMLSF 1
             KS EL+ P   + P MLSF
Sbjct: 1138 DKSRELQEPVCAENPLMLSF 1157


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  187 bits (476), Expect = 1e-45
 Identities = 83/149 (55%), Positives = 112/149 (75%)
 Frame = -2

Query: 447  SSEISCAPEDVPYDTDLEMPGSEDFIDNAWNLKCSYEGQLNALLGQYMVSTEEEIVTGHV 268
            S+ +   P+D+PYDT LE+ GS  FID+AWN KCSY+GQLN LLGQY V+ EEE+VTG++
Sbjct: 1011 SAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGYI 1070

Query: 267  WSLPTYNSRKHGDIKEKIKDAYHVLKKEFKNIFMNIGQDSQQLTEDEMNALYEQKASAWY 88
            WS+P YN++K G++KE++K AY+ L+KEF+N+F  +  D   L +DE N +YE+KASAWY
Sbjct: 1071 WSMPKYNAKKQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWY 1130

Query: 87   QVSYHPQWVKKSLELRAPGEDKAPAMLSF 1
            QV+YHP WV +SLEL+         MLSF
Sbjct: 1131 QVTYHPHWVARSLELQLADAVSNTVMLSF 1159