BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00027145
         (1136 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun...   452   e-124
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   431   e-118
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr...   431   e-118
ref|XP_007031141.1| Pseudouridine synthase family protein isofor...   429   e-117
ref|XP_007031140.1| Pseudouridine synthase family protein isofor...   429   e-117
ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [...   428   e-117
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like...   426   e-117
gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]           413   e-113
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]           413   e-113
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   410   e-112
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   410   e-112
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   409   e-112
ref|XP_004495663.1| PREDICTED: RNA pseudourine synthase 1-like [...   407   e-111
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like...   404   e-110
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [...   402   e-109
ref|XP_003591214.1| Lon protease-like protein [Medicago truncatu...   398   e-108
gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus...   389   e-106
ref|XP_003555184.1| PREDICTED: RNA pseudouridine synthase 1-like...   386   e-105
ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [A...   385   e-104
ref|XP_007144996.1| hypothetical protein PHAVU_007G200900g [Phas...   384   e-104

>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
            gi|462401230|gb|EMJ06787.1| hypothetical protein
            PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score =  452 bits (1163), Expect = e-124
 Identities = 225/312 (72%), Positives = 256/312 (82%), Gaps = 2/312 (0%)
 Frame = -1

Query: 1061 FDSAKRDNLNDPKTL-NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDE 885
            FD+    + N  +T  NYP PLSPPLP ISK IEL RA SAS KS+LFSLS  D+VFED+
Sbjct: 5    FDAINPSSQNALQTSQNYPVPLSPPLPPISKHIELARAMSASSKSSLFSLSRDDVVFEDQ 64

Query: 884  WLIVVNKPEGVYCESVLSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHK 705
            WLIVVNKP+GVYCESVL S+P  L DS       + LELH+ANRLDRDTSGLMVITKSHK
Sbjct: 65   WLIVVNKPQGVYCESVLESVPQLLCDSAESGTPANQLELHLANRLDRDTSGLMVITKSHK 124

Query: 704  IAGKLVKAFTDHKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPG 525
            +A KLVKAFTDHK++KTYIA CIG APKWE I++KSGHGRSKFG WRVY+ASDVGR LPG
Sbjct: 125  VASKLVKAFTDHKISKTYIARCIGSAPKWERITLKSGHGRSKFGAWRVYAASDVGRTLPG 184

Query: 524  GSVVRDMATKFEVLSISGQGSFKEPTKSRPNGEEFLVVEDPSV-KGDDENDEILVRAYPQ 348
            GS+VRDM T FEVLSI+GQGS KEP++ + +    +VV++ +V   D + DEILVRA P+
Sbjct: 185  GSMVRDMETSFEVLSINGQGSLKEPSEFKKDEANTIVVQEKAVIDKDTKKDEILVRARPR 244

Query: 347  SGRTHQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQA 168
            SGRTHQIRLHCQYLGISIRGDVKYEGVYEW+GRTYDGH LHAESLSF+HPITGL V FQA
Sbjct: 245  SGRTHQIRLHCQYLGISIRGDVKYEGVYEWKGRTYDGHELHAESLSFEHPITGLPVMFQA 304

Query: 167  PLPQWASQAFQP 132
            P+P WASQA QP
Sbjct: 305  PVPSWASQALQP 316


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 321

 Score =  431 bits (1108), Expect = e-118
 Identities = 215/308 (69%), Positives = 252/308 (81%), Gaps = 7/308 (2%)
 Frame = -1

Query: 1034 NDPKTL-NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPE 858
            NDP TL NYP PLSPPLP+ISKQIEL RA SAS +S+LF+LS +D+++ED+WLI VNKP+
Sbjct: 14   NDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNKPQ 73

Query: 857  GVYCESVLSSIPLFLTDSMR-----PRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGK 693
            GVYCE+VL S+P  L  S          + +P E H+ANRLDRDTSG+MVITKSHK+A K
Sbjct: 74   GVYCETVLESVPRVLAASAELTDPSEGAEGNPHEFHLANRLDRDTSGVMVITKSHKVASK 133

Query: 692  LVKAFTDHKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVV 513
            LVKAFTDHK+ KTYIALCIG APKWE I+IKSGHGRSKFGVWRVY+ASDVG+ LPGGS V
Sbjct: 134  LVKAFTDHKIKKTYIALCIGLAPKWEKITIKSGHGRSKFGVWRVYAASDVGQTLPGGSTV 193

Query: 512  RDMATKFEVLSISGQGSFKEPTKSRPNGEEFLVVEDPSVKGDD-ENDEILVRAYPQSGRT 336
            +DM T FE+LS++GQGSFKE ++   + E  LVVE+ + K  D +  EILVRA+PQSGRT
Sbjct: 194  KDMETSFELLSVNGQGSFKELSEFEKD-ENILVVEEKAAKNADVKKVEILVRAFPQSGRT 252

Query: 335  HQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQ 156
            HQIRLHCQYLGISIRGDVKYEGVYEW GRTYDGH LHAE+LSF+HP+TG+ V  +APLP 
Sbjct: 253  HQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLRAPLPS 312

Query: 155  WASQAFQP 132
            WA QA QP
Sbjct: 313  WAIQASQP 320


>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
            gi|567881937|ref|XP_006433527.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
            gi|557535648|gb|ESR46766.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
            gi|557535649|gb|ESR46767.1| hypothetical protein
            CICLE_v10001637mg [Citrus clementina]
          Length = 357

 Score =  431 bits (1107), Expect = e-118
 Identities = 218/331 (65%), Positives = 257/331 (77%), Gaps = 16/331 (4%)
 Frame = -1

Query: 1070 KTHFDSAKRDNLNDPKT-------LNYPKPLSPPLPAISKQIELNRANSASLKSNLFSLS 912
            KT F  A   N  +P          NYP PLSPPLPAISK IEL RA SAS KS+L+ LS
Sbjct: 26   KTFFSLASMLNPTEPTCENAPQIQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLS 85

Query: 911  ETDIVFEDEWLIVVNKPEGVYCESVLSSIPLFLT-DSMRPRF-------QTDPLELHMAN 756
             +D+++EDEW + VNKP+GVYCESVL+S+P FL  DS   +        + + LELH+AN
Sbjct: 86   RSDVLYEDEWFVAVNKPQGVYCESVLASVPCFLAGDSAESKSGRLSEGTKLNLLELHLAN 145

Query: 755  RLDRDTSGLMVITKSHKIAGKLVKAFTDHKVTKTYIALCIGQAPKWETISIKSGHGRSKF 576
            RLDRDTSG+MVITKSHK+A KLVKAFTDHKV+KTYIALCIG APKW+ I+I SGHGRSKF
Sbjct: 146  RLDRDTSGVMVITKSHKVASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKF 205

Query: 575  GVWRVYSASDVGRKLPGGSVVRDMATKFEVLSISGQGSFKEPTKSRPNGEEFLVVEDPSV 396
            G WRVY+ASDVGR LPGGSVVRDM T FEVLS++G+GSFKEP++ + + E  +VVE  +V
Sbjct: 206  GAWRVYAASDVGRVLPGGSVVRDMVTSFEVLSVNGEGSFKEPSELQEHEENNIVVEKKAV 265

Query: 395  -KGDDENDEILVRAYPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHAE 219
               D + +EILVRA+P+SGRTHQIRLHCQYLGISIRGDVKYEGVYEW G+ YDGH LHAE
Sbjct: 266  LDADAKKNEILVRAFPRSGRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAE 325

Query: 218  SLSFDHPITGLQVEFQAPLPQWASQAFQPAS 126
            SLSFDHP+TG  V  QAPLP W ++A Q +S
Sbjct: 326  SLSFDHPVTGCPVMVQAPLPLWGTEALQSSS 356


>ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
            gi|508719746|gb|EOY11643.1| Pseudouridine synthase family
            protein isoform 2 [Theobroma cacao]
          Length = 313

 Score =  429 bits (1103), Expect = e-117
 Identities = 211/304 (69%), Positives = 247/304 (81%), Gaps = 6/304 (1%)
 Frame = -1

Query: 1016 NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCESV 837
            NYP PLSPPLP+ISK IEL RA +AS KS+LF LS +DI++EDEWLI VNKP+G+YC+SV
Sbjct: 10   NYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGIYCDSV 69

Query: 836  LSSIPLFLTDS-----MRPRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTD 672
            L+SIP FL+DS     +    Q  P ELH+ANRLDRDTSG+MVITKSHK+A  LVKAFT+
Sbjct: 70   LASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHKVAAALVKAFTN 129

Query: 671  HKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKF 492
            H V KTY+A CIG APK E I+IKSGHGRSKFG WRVY+A DVGRKLPGGS+VRDM T F
Sbjct: 130  HMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIVRDMGTTF 189

Query: 491  EVLSISGQGSFKEPTKSRPNGEEFLVVEDPSV-KGDDENDEILVRAYPQSGRTHQIRLHC 315
            EVLSI+GQ S+KEP++S  + E  ++VE+ +V   D + DEILVRA+P+SGRTHQIRLHC
Sbjct: 190  EVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVDAQKDEILVRAFPRSGRTHQIRLHC 249

Query: 314  QYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQAFQ 135
            QYLGI IRGDVKYEGVYEW+GR YD H LHAESLSF HP+TG  V  QAPLP WASQA Q
Sbjct: 250  QYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMIQAPLPLWASQALQ 309

Query: 134  PASN 123
            P ++
Sbjct: 310  PLTD 313


>ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
            gi|508719745|gb|EOY11642.1| Pseudouridine synthase family
            protein isoform 1 [Theobroma cacao]
          Length = 345

 Score =  429 bits (1103), Expect = e-117
 Identities = 211/304 (69%), Positives = 247/304 (81%), Gaps = 6/304 (1%)
 Frame = -1

Query: 1016 NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCESV 837
            NYP PLSPPLP+ISK IEL RA +AS KS+LF LS +DI++EDEWLI VNKP+G+YC+SV
Sbjct: 42   NYPTPLSPPLPSISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGIYCDSV 101

Query: 836  LSSIPLFLTDS-----MRPRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTD 672
            L+SIP FL+DS     +    Q  P ELH+ANRLDRDTSG+MVITKSHK+A  LVKAFT+
Sbjct: 102  LASIPRFLSDSTVSDRLSDGNQASPFELHLANRLDRDTSGIMVITKSHKVAAALVKAFTN 161

Query: 671  HKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKF 492
            H V KTY+A CIG APK E I+IKSGHGRSKFG WRVY+A DVGRKLPGGS+VRDM T F
Sbjct: 162  HMVHKTYVAFCIGSAPKSERITIKSGHGRSKFGAWRVYAAGDVGRKLPGGSIVRDMGTTF 221

Query: 491  EVLSISGQGSFKEPTKSRPNGEEFLVVEDPSV-KGDDENDEILVRAYPQSGRTHQIRLHC 315
            EVLSI+GQ S+KEP++S  + E  ++VE+ +V   D + DEILVRA+P+SGRTHQIRLHC
Sbjct: 222  EVLSINGQQSYKEPSESVKDEETSVIVEEKAVIDVDAQKDEILVRAFPRSGRTHQIRLHC 281

Query: 314  QYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQAFQ 135
            QYLGI IRGDVKYEGVYEW+GR YD H LHAESLSF HP+TG  V  QAPLP WASQA Q
Sbjct: 282  QYLGIPIRGDVKYEGVYEWKGRRYDAHELHAESLSFQHPVTGFPVMIQAPLPLWASQALQ 341

Query: 134  PASN 123
            P ++
Sbjct: 342  PLTD 345


>ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp.
            vesca]
          Length = 347

 Score =  428 bits (1101), Expect = e-117
 Identities = 207/296 (69%), Positives = 245/296 (82%), Gaps = 2/296 (0%)
 Frame = -1

Query: 1016 NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCESV 837
            NYP PLSPPLP ISK +EL RA SAS KS+LF+LS  D+V+ED+WLIVVNKP+G+YCE+V
Sbjct: 51   NYPVPLSPPLPLISKNMELARAMSASSKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCETV 110

Query: 836  LSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTDHKVTK 657
            L S+P  L +S     +    E+H+ANRLDRDTSG+M+ITKSHK+A KLVKAFTDHKV+K
Sbjct: 111  LESVPKLLAES---GLEGKAPEIHLANRLDRDTSGVMIITKSHKVAAKLVKAFTDHKVSK 167

Query: 656  TYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKFEVLSI 477
            TYIA CIG APKWE I++KSGHGRSKFG WRVY+ASDVGR LPGGSVVRDM T FE+LSI
Sbjct: 168  TYIACCIGSAPKWERITVKSGHGRSKFGAWRVYAASDVGRPLPGGSVVRDMETSFEILSI 227

Query: 476  SGQGSFKEPTKSRPNGEEFLVVEDPSV--KGDDENDEILVRAYPQSGRTHQIRLHCQYLG 303
            +GQG F+EP++ R + ++ LVVE+ +V   GD + DEILV A P+SGRTHQIRLHCQYLG
Sbjct: 228  NGQGCFREPSEFRIDDDKILVVEEKAVIIDGDAKKDEILVIARPRSGRTHQIRLHCQYLG 287

Query: 302  ISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQAFQ 135
            ISIRGDVKYEGVYEW+G TY GH LHAES+S DHPITGL + F+APLP WA+Q  Q
Sbjct: 288  ISIRGDVKYEGVYEWKGTTYGGHELHAESMSLDHPITGLPILFRAPLPSWANQLIQ 343


>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
          Length = 324

 Score =  426 bits (1096), Expect = e-117
 Identities = 215/313 (68%), Positives = 253/313 (80%), Gaps = 10/313 (3%)
 Frame = -1

Query: 1034 NDPKTL-NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPE 858
            N P+T  NYP PLSPPLPAISK IEL RA SAS KS+L+ LS +D+++EDEWL+ VNKP+
Sbjct: 11   NAPQTQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWLVAVNKPQ 70

Query: 857  GVYCESVLSSIPLFLT-DSMRPRF-------QTDPLELHMANRLDRDTSGLMVITKSHKI 702
            GVYCESVL+S+P  L  DS   +        + + LELH+ANRLDRDTSG+MVITKSHK+
Sbjct: 71   GVYCESVLASVPCLLAGDSAESKSGRLSEGTKLNLLELHLANRLDRDTSGVMVITKSHKV 130

Query: 701  AGKLVKAFTDHKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGG 522
            A KLVKAFTDHKV+KTYIALCIG APKW+ I+I SGHGRSKFG WRVY+ASDVGR LPGG
Sbjct: 131  ASKLVKAFTDHKVSKTYIALCIGPAPKWKRITIISGHGRSKFGAWRVYAASDVGRVLPGG 190

Query: 521  SVVRDMATKFEVLSISGQGSFKEPTKSRPNGEEFLVVEDPSV-KGDDENDEILVRAYPQS 345
            SVVRDM T FEVLS++G+GSFKEP++ + + E  +VVE  +V   D + +EILVR +P+S
Sbjct: 191  SVVRDMVTSFEVLSVNGEGSFKEPSELQEDEENNIVVEKKAVLDADAKKNEILVRVFPRS 250

Query: 344  GRTHQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAP 165
            GRTHQIRLHCQYLGISIRGDVKYEGVYEW G+ YDGH LHAESLS +HPITG  V  QAP
Sbjct: 251  GRTHQIRLHCQYLGISIRGDVKYEGVYEWNGKRYDGHELHAESLSLEHPITGCPVMVQAP 310

Query: 164  LPQWASQAFQPAS 126
            LP WA+QA Q +S
Sbjct: 311  LPLWATQAPQSSS 323


>gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  413 bits (1062), Expect = e-113
 Identities = 201/298 (67%), Positives = 237/298 (79%), Gaps = 4/298 (1%)
 Frame = -1

Query: 1016 NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCESV 837
            NYP PLSPP P +SK +EL+RA SAS KS+LFS+S  D VFEDE L+ VNKP+G+YCESV
Sbjct: 21   NYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNKPQGIYCESV 80

Query: 836  LSSIPLFLTDSMRP---RFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTDHK 666
              S+   L+DS  P     +  P ELH+ANRLDRDTSGLM+ITKSHK+A KLVKAFT HK
Sbjct: 81   FDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASKLVKAFTTHK 140

Query: 665  VTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKFEV 486
            V+KTYIA C+G APKWE I+IKSGHGRSKFG WRVY+ASDVGR LPGGSVVRDM T FEV
Sbjct: 141  VSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEV 200

Query: 485  LSISGQGSFKEPTKSRPNGEEFLVVEDPS-VKGDDENDEILVRAYPQSGRTHQIRLHCQY 309
            LS++GQ   KEP++ R +G   L+VE+ + +  D + DEILVRA P+SGR+HQIRLHCQY
Sbjct: 201  LSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRSHQIRLHCQY 260

Query: 308  LGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQAFQ 135
            LGIS+RGDVKYEGV +W+G+TY+GH LHAESLSF+HPIT L V    PLP WASQ  Q
Sbjct: 261  LGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLPVVLSTPLPMWASQVTQ 318


>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score =  413 bits (1061), Expect = e-113
 Identities = 201/298 (67%), Positives = 237/298 (79%), Gaps = 4/298 (1%)
 Frame = -1

Query: 1016 NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCESV 837
            NYP PLSPP P +SK +EL+RA SAS KS+LFS+S  D VFEDE L+ VNKP+G+YCESV
Sbjct: 21   NYPVPLSPPPPPVSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNKPQGIYCESV 80

Query: 836  LSSIPLFLTDSMRP---RFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTDHK 666
              S+   L+DS  P     +  P ELH+ANRLDRDTSGLM+ITKSHK+A KLVKAFT HK
Sbjct: 81   FDSVRKVLSDSSEPGQLETEASPPELHLANRLDRDTSGLMLITKSHKVASKLVKAFTTHK 140

Query: 665  VTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKFEV 486
            V+KTYIA C+G APKWE I+IKSGHGRSKFG WRVY+ASDVGR LPGGSVVRDM T FEV
Sbjct: 141  VSKTYIAFCVGSAPKWENITIKSGHGRSKFGAWRVYAASDVGRTLPGGSVVRDMETSFEV 200

Query: 485  LSISGQGSFKEPTKSRPNGEEFLVVEDPS-VKGDDENDEILVRAYPQSGRTHQIRLHCQY 309
            LS++GQ   KEP++ R +G   L+VE+ + +  D + DEILVRA P+SGR+HQIRLHCQY
Sbjct: 201  LSVNGQRVSKEPSEFRKDGNNVLIVEEKALIDRDGKKDEILVRARPKSGRSHQIRLHCQY 260

Query: 308  LGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQAFQ 135
            LGIS+RGDVKYEGV +W+G+TY+GH LHAESLSF+HPIT L V    PLP WASQ  Q
Sbjct: 261  LGISLRGDVKYEGVSQWKGKTYNGHELHAESLSFEHPITSLLVVLSTPLPMWASQVTQ 318


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  410 bits (1054), Expect = e-112
 Identities = 202/311 (64%), Positives = 243/311 (78%), Gaps = 2/311 (0%)
 Frame = -1

Query: 1058 DSAKRDNLNDPKTL-NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEW 882
            DS++    N P T  NYP PLSPPLPAISK +EL RA  AS KS+L++LS  D+++EDEW
Sbjct: 41   DSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEW 100

Query: 881  LIVVNKPEGVYCESVLSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHKI 702
            LI VNKP+G+YCE+VL+++P  L DS     +T   ELH+ANRLDRDTSG+MVITKSHK+
Sbjct: 101  LIAVNKPQGIYCENVLAAVPRLLGDSANAGIKTSLPELHLANRLDRDTSGVMVITKSHKV 160

Query: 701  AGKLVKAFTDHKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGG 522
            A KLVKAFTDH V+K+YIA C+G +PKW+ I++KSGHGRSKFGVWRVY+A+DVGR LPGG
Sbjct: 161  ASKLVKAFTDHTVSKSYIAFCVGTSPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGG 220

Query: 521  SVVRDMATKFEVLSISGQGSFKEPTKSRPNGEEFLVVEDPS-VKGDDENDEILVRAYPQS 345
            SVVRDM T FEVLS++G+ + +E  K R   EE +VV   S V  D   DEIL+RA P+S
Sbjct: 221  SVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRS 280

Query: 344  GRTHQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAP 165
            GRTHQIRLHCQYLGI IRGDVKYEGV EW  + YD H LHAESL F HP+TG+ ++ QAP
Sbjct: 281  GRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAP 340

Query: 164  LPQWASQAFQP 132
            LP WASQA QP
Sbjct: 341  LPSWASQALQP 351


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  410 bits (1054), Expect = e-112
 Identities = 200/297 (67%), Positives = 239/297 (80%), Gaps = 1/297 (0%)
 Frame = -1

Query: 1016 NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCESV 837
            NYPKP+SPPLPAISK IE +RA SAS +S+LFSL  +DI+FED+WL+ VNKP+GVYCE++
Sbjct: 53   NYPKPISPPLPAISKHIEQSRAMSASSRSSLFSLCRSDILFEDQWLMAVNKPQGVYCETI 112

Query: 836  LSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTDHKVTK 657
            L S+   L DS           LH+ANRLDRDTSG+MVITKSH++A KL+KAF+D KVTK
Sbjct: 113  LLSVSRMLDDSDG---HDSCRSLHLANRLDRDTSGVMVITKSHQVAAKLMKAFSDRKVTK 169

Query: 656  TYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKFEVLSI 477
            TY+ALCIG AP WE I+IKSGHGRSKFG WRVY+ASDVGR LP    ++DM T FEVLS+
Sbjct: 170  TYLALCIGAAPTWEKITIKSGHGRSKFGAWRVYAASDVGRALPNAPAIKDMVTSFEVLSV 229

Query: 476  SGQGSFKEPTKSRPNGEEFLVVEDPSV-KGDDENDEILVRAYPQSGRTHQIRLHCQYLGI 300
            +GQG+ KE  +SR   E  LVVE+ SV   +   DEILVRA+P+SGRTHQIRLHCQYLGI
Sbjct: 230  NGQGNVKELPESRKADETVLVVEERSVIDSNARQDEILVRAFPRSGRTHQIRLHCQYLGI 289

Query: 299  SIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQAFQPA 129
            SIRGDVKYEGV+EW+G+ YDGH LHAESLSF+HP+TG+ V F+APLP WA QA QP+
Sbjct: 290  SIRGDVKYEGVHEWKGKIYDGHELHAESLSFEHPVTGVDVAFRAPLPSWAVQALQPS 346


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
            [Cucumis sativus]
          Length = 366

 Score =  409 bits (1052), Expect = e-112
 Identities = 202/311 (64%), Positives = 242/311 (77%), Gaps = 2/311 (0%)
 Frame = -1

Query: 1058 DSAKRDNLNDPKTL-NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEW 882
            DS++    N P T  NYP PLSPPLPAISK +EL RA  AS KS+L++LS  D+++EDEW
Sbjct: 41   DSSEPVTGNCPSTAENYPVPLSPPLPAISKNLELARAMVASSKSSLYALSANDVIYEDEW 100

Query: 881  LIVVNKPEGVYCESVLSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHKI 702
            LI VNKP+G+YCE+VL+++P  L DS     +T   ELH+ANRLDRDTSG+MVITKSHK+
Sbjct: 101  LIAVNKPQGIYCENVLAAVPRLLGDSANAGIKTSLPELHLANRLDRDTSGVMVITKSHKV 160

Query: 701  AGKLVKAFTDHKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGG 522
            A KLVKAFTDH V+K+YIA C+G +PKW  I++KSGHGRSKFGVWRVY+A+DVGR LPGG
Sbjct: 161  ASKLVKAFTDHTVSKSYIAFCVGTSPKWXKINVKSGHGRSKFGVWRVYAAADVGRSLPGG 220

Query: 521  SVVRDMATKFEVLSISGQGSFKEPTKSRPNGEEFLVVEDPS-VKGDDENDEILVRAYPQS 345
            SVVRDM T FEVLS++G+ + +E  K R   EE +VV   S V  D   DEIL+RA P+S
Sbjct: 221  SVVRDMETYFEVLSVNGKNTMEELQKFRRGEEETIVVHTKSLVDIDSHKDEILIRARPRS 280

Query: 344  GRTHQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAP 165
            GRTHQIRLHCQYLGI IRGDVKYEGV EW  + YD H LHAESL F HP+TG+ ++ QAP
Sbjct: 281  GRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQAP 340

Query: 164  LPQWASQAFQP 132
            LP WASQA QP
Sbjct: 341  LPSWASQALQP 351


>ref|XP_004495663.1| PREDICTED: RNA pseudourine synthase 1-like [Cicer arietinum]
          Length = 313

 Score =  407 bits (1046), Expect = e-111
 Identities = 201/300 (67%), Positives = 236/300 (78%), Gaps = 6/300 (2%)
 Frame = -1

Query: 1016 NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCESV 837
            NYP PLSP LPAISK+IELNRA  AS  S LFSLS+  I++EDEWL+VVNKP G+YC+SV
Sbjct: 22   NYPVPLSPQLPAISKEIELNRAKIASTNSQLFSLSKIHIIYEDEWLLVVNKPNGIYCDSV 81

Query: 836  LSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTDHKVTK 657
            L+S+            QT P ELH+ANRLDRDTSG+MVITKSHK+A KLVKAFTDHKV K
Sbjct: 82   LTSLQ---------SQQTLPSELHLANRLDRDTSGIMVITKSHKVASKLVKAFTDHKVQK 132

Query: 656  TYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKFEVLSI 477
            TYIA C G  P WETI+++SGHGRSKFG WRVY+ SD GR LPGGSVVR M T FEVLS+
Sbjct: 133  TYIARCTGSIPNWETITVRSGHGRSKFGAWRVYAFSDSGRVLPGGSVVRSMETSFEVLSV 192

Query: 476  SGQGSFKEPTKSRPNGEEFLVVEDPSVK---GDDEND---EILVRAYPQSGRTHQIRLHC 315
            +G G+F++ ++S   G   LVVE+ SVK   GDDEN+   EI+VRAYP+SGRTHQIRLHC
Sbjct: 193  NGNGNFRDVSESEFEGSSSLVVEEKSVKLDGGDDENENHHEIVVRAYPRSGRTHQIRLHC 252

Query: 314  QYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQAFQ 135
            QYLGISI GDVKYEGVYEW+G  + GH LHAE+LSFDHP+TG+ +  +APLPQW +Q  Q
Sbjct: 253  QYLGISIIGDVKYEGVYEWKGEIHHGHHLHAETLSFDHPVTGIHLMLRAPLPQWVNQVLQ 312


>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
          Length = 332

 Score =  404 bits (1037), Expect = e-110
 Identities = 205/331 (61%), Positives = 249/331 (75%), Gaps = 7/331 (2%)
 Frame = -1

Query: 1115 IRFLCNSTCLP------IMADKTHFDSAKRDNLNDPKTLNYPKPLSPPLPAISKQIELNR 954
            I F  +ST +        MA +++FDS          T +YP PLSPPLPA+SK IE NR
Sbjct: 13   INFFASSTRISRHRRFIFMASQSYFDSPSA------ATTDYPVPLSPPLPALSKDIEPNR 66

Query: 953  ANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCESVLSSIPLFLTDSMRPRFQTDPL 774
            A +AS KS LFSLS + ++FEDEW+I VNKP+G+YCESVLSS+P  L D+       +  
Sbjct: 67   ALTASSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCESVLSSLPDLLNDT-----GANVS 121

Query: 773  ELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTDHKVTKTYIALCIGQAPKWETISIKSG 594
            ELH+ANRLDRDTSG+M+ITK HK+A K VKAFTDHKV KTY+A C+G APKWE I++KSG
Sbjct: 122  ELHLANRLDRDTSGVMLITKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSG 181

Query: 593  HGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKFEVLSISGQGSFKEPTKSRPNGEEFLV 414
            HGRSK+G WRVY+ASD GRKLPGGS+V+DM T FEVLS++G G FKE +    + E+ ++
Sbjct: 182  HGRSKYGAWRVYAASDAGRKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDFHKD-EDVVI 240

Query: 413  VEDPSVKGDD-ENDEILVRAYPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDG 237
            V++ SV G D + DEILVRA P+SGRTHQIRLHCQYLGI IRGDV+YEGVYEW+G  YD 
Sbjct: 241  VQEKSVIGCDLKKDEILVRASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGSRYDS 300

Query: 236  HALHAESLSFDHPITGLQVEFQAPLPQWASQ 144
            H LHAESLSF+HPITG  +  QAPLP WA Q
Sbjct: 301  HELHAESLSFEHPITGKPMLLQAPLPSWAIQ 331


>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
          Length = 308

 Score =  402 bits (1034), Expect = e-109
 Identities = 200/313 (63%), Positives = 242/313 (77%), Gaps = 1/313 (0%)
 Frame = -1

Query: 1079 MADKTHFDSAKRDNLNDPKTLNYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDI 900
            MA +++FDS          T +YP PLSPPLP +SK IE NRA +AS KS LFSLS + +
Sbjct: 1    MASQSYFDSPS------VATTDYPVPLSPPLPTLSKDIEPNRALTASSKSALFSLSRSHV 54

Query: 899  VFEDEWLIVVNKPEGVYCESVLSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVI 720
            +FEDEW+I VNKP+G+YCESVLSS+P  L D+       +  ELH+ANRLDRDTSG+M+I
Sbjct: 55   IFEDEWIIAVNKPQGIYCESVLSSLPDLLNDT-----GANVSELHLANRLDRDTSGVMLI 109

Query: 719  TKSHKIAGKLVKAFTDHKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVG 540
            TK HK+A K VKAFTDHKV KTY+A C+G APKWE I++KSGHGRSK+G WRVY+ASD G
Sbjct: 110  TKLHKVAAKFVKAFTDHKVRKTYLAYCVGLAPKWEKITVKSGHGRSKYGAWRVYAASDAG 169

Query: 539  RKLPGGSVVRDMATKFEVLSISGQGSFKEPTKSRPNGEEFLVVEDPSVKGDD-ENDEILV 363
            RKLPGGS+V+DM T FEVLS++G G FKE +    + E+ ++V++ SV G D + DEILV
Sbjct: 170  RKLPGGSLVKDMETSFEVLSVNGLGCFKEVSDLHKD-EDIVIVQEKSVIGCDLKKDEILV 228

Query: 362  RAYPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQ 183
            RA P+SGRTHQIRLHCQYLGI IRGDV+YEGVYEW+G  YD H LHAESLSF+HPITG  
Sbjct: 229  RASPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYEWKGNIYDSHELHAESLSFEHPITGKS 288

Query: 182  VEFQAPLPQWASQ 144
            +  QAPLP WA Q
Sbjct: 289  MLLQAPLPSWAIQ 301


>ref|XP_003591214.1| Lon protease-like protein [Medicago truncatula]
            gi|355480262|gb|AES61465.1| Lon protease-like protein
            [Medicago truncatula]
          Length = 1262

 Score =  398 bits (1022), Expect = e-108
 Identities = 200/301 (66%), Positives = 239/301 (79%), Gaps = 3/301 (0%)
 Frame = -1

Query: 1034 NDPKTL-NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPE 858
            N P  L NYP PLSP LPAISKQIELNRA  A+  S LFSL++T I++EDE+L+ VNKP+
Sbjct: 10   NTPTVLSNYPIPLSPQLPAISKQIELNRATIATSNSELFSLAQTHIIYEDEYLLAVNKPQ 69

Query: 857  GVYCESVLSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAF 678
            G+YC++VL+S+    T            ELH+ANRLDRDTSG+M+ITKSHKIA KLVKAF
Sbjct: 70   GIYCDNVLTSLQSQSTVGS---------ELHLANRLDRDTSGVMLITKSHKIASKLVKAF 120

Query: 677  TDHKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMAT 498
            TD +V KTYIA C G+ P W+TI++KSGHGRSKFG WRVY  SD GR LPGGSVVR+M T
Sbjct: 121  TDREVKKTYIAFCTGRVPDWKTITVKSGHGRSKFGAWRVYGFSDSGRGLPGGSVVREMET 180

Query: 497  KFEVLSISGQGSFKEPTKSRPNGEEFLVVEDPSVK--GDDENDEILVRAYPQSGRTHQIR 324
             FE LS++G+G F+E T+        +VVE+ +VK  GDDEN EI+VRAYP+SGRTHQIR
Sbjct: 181  SFEFLSVNGKGGFREVTELGFEEGNVVVVEEKAVKMEGDDEN-EIVVRAYPRSGRTHQIR 239

Query: 323  LHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQ 144
            LHCQYLGISI GDVKYEGVYEW+GR YDGH LHAE+LSFDHP+TG++V F+APLPQWA+Q
Sbjct: 240  LHCQYLGISIIGDVKYEGVYEWKGRVYDGHHLHAETLSFDHPVTGVRVMFRAPLPQWANQ 299

Query: 143  A 141
            A
Sbjct: 300  A 300



 Score =  125 bits (313), Expect = 4e-26
 Identities = 97/278 (34%), Positives = 122/278 (43%), Gaps = 3/278 (1%)
 Frame = -1

Query: 932  SNLFSLSETDIVFEDEWLIVVNKPEGVYCESVLSSIPLFLTDSMRPRFQTDPLELHMANR 753
            SN F  SET  +F    LI +        ES++S  PL    S  PR             
Sbjct: 893  SNGFRSSETRQIFHSNILIKL-----AVVESLVSG-PLVFLQSTIPR------------- 933

Query: 752  LDRDTSGLMVITKSHKIAGKLVKAFTDHKVTKTYIALCIGQAPKWETISIKSGHGRSKFG 573
                 + +M+I KSHK+A KLVKAFTDHKV KTYI+LC GQ P WETI+++S +GRSKFG
Sbjct: 934  ----QTYVMLIIKSHKVASKLVKAFTDHKVQKTYISLCTGQTPNWETITVRSCYGRSKFG 989

Query: 572  VWRVY---SASDVGRKLPGGSVVRDMATKFEVLSISGQGSFKEPTKSRPNGEEFLVVEDP 402
              RVY     +++G ++  G VV + A K E +                           
Sbjct: 990  TRRVYVFLEVAELGFEVSDGVVVEEKAVKMEGI--------------------------- 1022

Query: 401  SVKGDDENDEILVRAYPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHA 222
                                     + HCQYLGISI GDVKYEG                
Sbjct: 1023 -------------------------QFHCQYLGISIIGDVKYEG---------------- 1041

Query: 221  ESLSFDHPITGLQVEFQAPLPQWASQAFQPASNGERDT 108
                FDH +TG++V   A LPQW +Q     SN   DT
Sbjct: 1042 ----FDHLVTGVRVMLCASLPQWVNQVL---SNMNIDT 1072



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 302 ISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDH 201
           ISI  DVKYEGVYE +GR YDGH LHAE+LSFDH
Sbjct: 796 ISIFRDVKYEGVYECKGRVYDGHHLHAETLSFDH 829


>gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus guttatus]
          Length = 323

 Score =  389 bits (1000), Expect = e-106
 Identities = 196/328 (59%), Positives = 242/328 (73%), Gaps = 5/328 (1%)
 Frame = -1

Query: 1079 MADKTHFDSAKRDNLNDPKTL-NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETD 903
            MA ++  +S      N P++L NYP PLSPP P ISK +ELNRA +AS KS+LFSLS  D
Sbjct: 1    MAAESRLNSPNTQPENAPQSLQNYPVPLSPPPPLISKNVELNRALTASSKSSLFSLSRKD 60

Query: 902  IVFEDEWLIVVNKPEGVYCESVLSSIPLFL-TDSMRPRFQTDPLELHMANRLDRDTSGLM 726
            ++FEDEWLI VNKP G+YCE++LSS+ + L TD ++ +      ELH++NRLDRDTSG++
Sbjct: 61   VLFEDEWLIAVNKPNGIYCETILSSVQILLNTDQVKLQ------ELHLSNRLDRDTSGVI 114

Query: 725  VITKSHKIAGKLVKAFTDHKVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASD 546
            +ITKSHK+A KLVKAFT+H V KTY+A C+G  PKW+ + IKSGHGRSK G WRVY+ SD
Sbjct: 115  LITKSHKVAAKLVKAFTNHMVKKTYLASCVGTFPKWKNMIIKSGHGRSKHGAWRVYAYSD 174

Query: 545  VGRKLPGGSVVRDMATKFEVLSISGQGSFKEPTKSRPNGEEFLVVEDPSVKG---DDEND 375
            VGR LPGGS VRDM T F+VLS++G+   +E   +    E+ +  E   V G    DE D
Sbjct: 175  VGRVLPGGSFVRDMETSFDVLSVNGKSCSQESDANHEEEEKIVAEEKSEVVGSCCSDERD 234

Query: 374  EILVRAYPQSGRTHQIRLHCQYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPI 195
            E++VRA+P+SGRTHQIRLHCQYLGI I GDVKYEGVYEW+ RTY+GH LHAE+LSF+HPI
Sbjct: 235  EVVVRAHPRSGRTHQIRLHCQYLGIPIIGDVKYEGVYEWKDRTYEGHELHAETLSFEHPI 294

Query: 194  TGLQVEFQAPLPQWASQAFQPASNGERD 111
            TG  V  QAPLP WASQA   A     D
Sbjct: 295  TGQSVFIQAPLPLWASQALAQAQLSSLD 322


>ref|XP_003555184.1| PREDICTED: RNA pseudouridine synthase 1-like [Glycine max]
          Length = 320

 Score =  386 bits (992), Expect = e-105
 Identities = 190/301 (63%), Positives = 235/301 (78%), Gaps = 4/301 (1%)
 Frame = -1

Query: 1022 TLNYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCE 843
            T NYP PLSPPLP ISKQ+EL+RA SA+  S+LFSLS  DI++ D+ LI VNK  G+YCE
Sbjct: 32   TENYPVPLSPPLPPISKQLELSRAMSAASNSSLFSLSPADILYHDDHLIAVNKHPGIYCE 91

Query: 842  SVLSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTDHKV 663
            ++LSS+             +   +LH+ANRLDRDT+G++++TKSHK+A KLVKAFTDHKV
Sbjct: 92   TLLSSLA------------SQSHQLHLANRLDRDTTGVLLLTKSHKVAAKLVKAFTDHKV 139

Query: 662  TKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKFEVL 483
             KTYIALC G  P WE ++++SGHGRSKFG WRVY+ASDVGR LPGGSVVR M T FE+L
Sbjct: 140  KKTYIALCTGPPPNWERVTLRSGHGRSKFGAWRVYAASDVGRALPGGSVVRSMETSFELL 199

Query: 482  SISGQGSFKEPTKS---RPNGEEFLVVEDPSVKGDDEND-EILVRAYPQSGRTHQIRLHC 315
            S++ +G+F+E + S      GE  LVVE+ +VK D  N+ EI+VRAYP+SGRTHQIRLHC
Sbjct: 200  SVNRKGNFREVSDSEFGNVEGENVLVVEEKAVKEDGNNESEIVVRAYPRSGRTHQIRLHC 259

Query: 314  QYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQAFQ 135
            QYLGISI GDVKYEGVYEW+G T+  H LHAE+LSF+HP+TGL V+ +APLP WA+ AFQ
Sbjct: 260  QYLGISIVGDVKYEGVYEWKGTTHHAHHLHAETLSFEHPVTGLHVKLRAPLPPWATHAFQ 319

Query: 134  P 132
            P
Sbjct: 320  P 320


>ref|XP_006855276.1| hypothetical protein AMTR_s00057p00025150 [Amborella trichopoda]
            gi|548859042|gb|ERN16743.1| hypothetical protein
            AMTR_s00057p00025150 [Amborella trichopoda]
          Length = 326

 Score =  385 bits (990), Expect = e-104
 Identities = 189/299 (63%), Positives = 233/299 (77%), Gaps = 3/299 (1%)
 Frame = -1

Query: 1028 PKTLNYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVY 849
            P TL++P PL+   P ISKQ+EL+RA +AS KS  FS++++D+++ED+WLI +NKP GVY
Sbjct: 25   PNTLDFPIPLTRHPPPISKQVELDRAMAASAKSG-FSITKSDVIYEDQWLIAINKPSGVY 83

Query: 848  CESVLSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTDH 669
            C+ VL+SIP  L  S       +PLELH+ NRLDRDTSG+M+ITK HK+AGKLV+AFT+H
Sbjct: 84   CDHVLASIPRLLGVSPESSGAENPLELHLGNRLDRDTSGVMLITKLHKVAGKLVQAFTEH 143

Query: 668  KVTKTYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKFE 489
            +V KTYIALCIG AP+WE I++KSGHGRSKFG WRVYSASD+GR LPGGSVVR+M T F+
Sbjct: 144  RVKKTYIALCIGLAPQWEEIALKSGHGRSKFGAWRVYSASDIGRTLPGGSVVREMVTSFK 203

Query: 488  VLSISGQGSFKEPTKSRPNGEEFLVVEDPSVK---GDDENDEILVRAYPQSGRTHQIRLH 318
            VLS++G  S       + N  E L+V D   K     D  DEIL+RAYPQSGRTHQIRLH
Sbjct: 204  VLSVNGLSSENIDFIEKRN--EMLIVRDEGSKISSTHDAKDEILIRAYPQSGRTHQIRLH 261

Query: 317  CQYLGISIRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQA 141
            CQYLGI +RGDVKYEG +EW+ +TYD HALHAE+LSFDHP+TG  +EF APLP WA +A
Sbjct: 262  CQYLGIPLRGDVKYEGPHEWKEKTYDYHALHAENLSFDHPVTGSLMEFHAPLPSWAREA 320


>ref|XP_007144996.1| hypothetical protein PHAVU_007G200900g [Phaseolus vulgaris]
            gi|561018186|gb|ESW16990.1| hypothetical protein
            PHAVU_007G200900g [Phaseolus vulgaris]
          Length = 315

 Score =  384 bits (986), Expect = e-104
 Identities = 186/294 (63%), Positives = 230/294 (78%)
 Frame = -1

Query: 1016 NYPKPLSPPLPAISKQIELNRANSASLKSNLFSLSETDIVFEDEWLIVVNKPEGVYCESV 837
            NYP PLSPPLPAISKQ+EL+RA +AS  S++FSLS +DI++ D+ LI VNK  G+YCE++
Sbjct: 34   NYPVPLSPPLPAISKQMELSRAMTASSNSSIFSLSPSDILYHDDHLIAVNKHHGIYCETL 93

Query: 836  LSSIPLFLTDSMRPRFQTDPLELHMANRLDRDTSGLMVITKSHKIAGKLVKAFTDHKVTK 657
            LSS+             +   ELH+ANRLDRDTSG++++TK+HK+A KLVKAFT+H+V K
Sbjct: 94   LSSLA------------SQSHELHLANRLDRDTSGILLLTKAHKVAAKLVKAFTEHRVKK 141

Query: 656  TYIALCIGQAPKWETISIKSGHGRSKFGVWRVYSASDVGRKLPGGSVVRDMATKFEVLSI 477
            TYIALC G  P WE ++++SGHGRSKFG WRVY+ASDVGR LPGGS VR M T FEVLS+
Sbjct: 142  TYIALCTGSPPNWERVTVRSGHGRSKFGAWRVYAASDVGRTLPGGSAVRSMETSFEVLSV 201

Query: 476  SGQGSFKEPTKSRPNGEEFLVVEDPSVKGDDENDEILVRAYPQSGRTHQIRLHCQYLGIS 297
            +G GS +E + S   G   LVVE+ +VK D    EI+VRAYP+SGRTHQIRLHCQYLGIS
Sbjct: 202  NGNGSLREVSDSGNEG-NVLVVEEKAVKEDGNESEIVVRAYPRSGRTHQIRLHCQYLGIS 260

Query: 296  IRGDVKYEGVYEWRGRTYDGHALHAESLSFDHPITGLQVEFQAPLPQWASQAFQ 135
            I GDVKYEGVYEW+G T+  H LHAE+LSF+HP+TG+ V  +APLP WA+QAFQ
Sbjct: 261  IIGDVKYEGVYEWKGTTHHAHHLHAETLSFEHPVTGVDVMLRAPLPLWATQAFQ 314