BLASTX nr result
ID: Akebia25_contig00026658
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Akebia25_contig00026658 (341 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09 ref|XP_006480111.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07 ref|XP_002320353.2| hypothetical protein POPTR_0014s12660g [Popu... 57 3e-06 >ref|XP_002266871.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Vitis vinifera] Length = 468 Score = 66.6 bits (161), Expect = 3e-09 Identities = 38/98 (38%), Positives = 41/98 (41%) Frame = +3 Query: 3 MRPFPEFNNIGNKILHLINTCTSPTXXXXXXXXXXXXXXXXXXXXXXXXXXACQSXXXXX 182 MRPFP N K L+L+ C SP ACQS Sbjct: 1 MRPFPRLNPRVTKFLNLLTNCCSPCHIHQIQAQLIVQNLHSNTTIAHHFITACQSLGLLD 60 Query: 183 XXXXXFNQIHRPHVFICNSLIRAFSHTQHSKTSFSIYT 296 F +PHVFICNSLIRAFSH T FSIYT Sbjct: 61 SALLLFTHHSKPHVFICNSLIRAFSHNHTPHTPFSIYT 98 >ref|XP_006480111.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Citrus sinensis] Length = 466 Score = 61.6 bits (148), Expect = 1e-07 Identities = 33/95 (34%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Frame = +3 Query: 15 PEFNN-IGNKILHLINTCTSPTXXXXXXXXXXXXXXXXXXXXXXXXXXACQSXXXXXXXX 191 P+ N+ +I++ + TCTSP+ ACQS Sbjct: 6 PQLNSPAAERIIYFLTTCTSPSHIHQIQAQLILQNFHCNATVASYFITACQSLNLLNTAH 65 Query: 192 XXFNQIHRPHVFICNSLIRAFSHTQHSKTSFSIYT 296 F+Q+H PHVF CNSLI+AFSH+Q +SIYT Sbjct: 66 LLFHQLHVPHVFACNSLIKAFSHSQIPHIPYSIYT 100 >ref|XP_002320353.2| hypothetical protein POPTR_0014s12660g [Populus trichocarpa] gi|550324072|gb|EEE98668.2| hypothetical protein POPTR_0014s12660g [Populus trichocarpa] Length = 410 Score = 56.6 bits (135), Expect = 3e-06 Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 1/98 (1%) Frame = +3 Query: 3 MRPFPEFNNIGNKILHLINTCTSPTXXXXXXXXXXXXXXXXXXXXXXXXXXACQS-XXXX 179 MR F E + + NKI++L+N C SPT A Q+ Sbjct: 1 MRTFQELSPMINKIINLLNKCASPTHIHQIQSQIILHHLHSNTTLAYHFITASQNFSLLR 60 Query: 180 XXXXXXFNQIHRPHVFICNSLIRAFSHTQHSKTSFSIY 293 F +HRPHVFICN+LIRAFS +SIY Sbjct: 61 SSLPLFFTHLHRPHVFICNTLIRAFSRIHDPHIPYSIY 98