BLASTX nr result

ID: Akebia25_contig00025515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00025515
         (227 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007009967.1| RNA helicase family protein [Theobroma cacao...    67   2e-09
ref|XP_007051013.1| RNA helicase family protein, putative [Theob...    62   6e-08

>ref|XP_007009967.1| RNA helicase family protein [Theobroma cacao]
           gi|508726880|gb|EOY18777.1| RNA helicase family protein
           [Theobroma cacao]
          Length = 1389

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 42/79 (53%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
 Frame = +1

Query: 1   KKKVTNQGYVRKK----PCLSKSQIRXXXXXXXXXXXXXXXXXSIRTLEEYKIQEEAYSL 168
           K+K  NQ   + K    P LSKSQIR                 SI+TLE+YKI E+AYSL
Sbjct: 106 KRKGNNQELEKAKEKQHPKLSKSQIRKLKKLEEEKEKALLLSKSIKTLEKYKISEDAYSL 165

Query: 169 LQSSGNIGQAETMREKRRR 225
           LQSS  IG AETMREKRRR
Sbjct: 166 LQSSKTIGLAETMREKRRR 184


>ref|XP_007051013.1| RNA helicase family protein, putative [Theobroma cacao]
           gi|508703274|gb|EOX95170.1| RNA helicase family protein,
           putative [Theobroma cacao]
          Length = 1264

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/65 (53%), Positives = 41/65 (63%)
 Frame = +1

Query: 31  RKKPCLSKSQIRXXXXXXXXXXXXXXXXXSIRTLEEYKIQEEAYSLLQSSGNIGQAETMR 210
           ++ P LSKSQ+R                 SI TLE+YKI E+AYSLL+SS  IG AETMR
Sbjct: 50  KQNPKLSKSQMRKLKKLEEEKEKAFLLSKSIETLEKYKIPEDAYSLLRSSKTIGLAETMR 109

Query: 211 EKRRR 225
           EKRRR
Sbjct: 110 EKRRR 114


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