BLASTX nr result
ID: Akebia25_contig00025176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00025176
(341 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_164801.1| replicase [Fragaria chiloensis latent virus] gi... 69 9e-10
ref|YP_008519304.1| replicase P1 [Blueberry shock virus] gi|5331... 65 1e-08
emb|CBH31364.1| protein 1a [Apple mosaic virus] 64 2e-08
gb|ACM63154.1| p1 protein [Bacopa chlorosis virus] 64 3e-08
ref|NP_041192.1| 125.7 kd protein [Alfalfa mosaic virus] gi|1372... 62 6e-08
gb|AGV15824.1| P1 [Alfalfa mosaic virus] 62 6e-08
gb|AFQ94057.1| P1 protein, partial [Alfalfa mosaic virus] 62 6e-08
emb|CBX36144.1| 126 kDa protein [Alfalfa mosaic virus] 62 6e-08
gb|ADO85715.1| P1 protein [Alfalfa mosaic virus] 62 6e-08
ref|YP_054422.1| replicase [Humulus japonicus latent virus] gi|4... 62 6e-08
ref|NP_604469.1| putative methyltransferase/helicase [Apple mosa... 62 6e-08
gb|AFI24678.1| hypothetical protein 1 [Piura virus] 62 8e-08
ref|YP_611154.1| putative viral replicase [Prune dwarf virus] gi... 62 8e-08
ref|YP_762618.1| putative replicase [Streptocarpus flower break ... 62 8e-08
ref|YP_762617.1| putative replicase [Streptocarpus flower break ... 62 8e-08
ref|NP_046152.1| unnamed protein product [Turnip vein-clearing v... 62 1e-07
ref|NP_046151.1| unnamed protein product [Turnip vein-clearing v... 62 1e-07
gb|ACU44508.1| p1 protein [Parietaria mottle virus] 62 1e-07
ref|YP_006446.1| p1 protein [Parietaria mottle virus] gi|4064678... 62 1e-07
ref|YP_008802585.1| 129k replicase protein [Yellow tailflower mi... 60 2e-07
>ref|YP_164801.1| replicase [Fragaria chiloensis latent virus]
gi|55976927|gb|AAV68306.1| replicase [Fragaria
chiloensis latent virus]
Length = 1083
Score = 68.6 bits (166), Expect = 9e-10
Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Frame = +3
Query: 27 SLIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREIFSSADESI---------ICR 179
+++D GGN H K R VHC P+L RD R+ R I S ++ C
Sbjct: 117 TILDLGGNHVSHLKMERHNVHCCCPLLDGRDCARHTERLISYSTFKASHPQEIHDMNFCE 176
Query: 180 KRFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKFFGVINYIPGIETK 335
F C+ +AD+A+A+HST D+ + +A+LKK V+KF I P + K
Sbjct: 177 NAFQHCDEKADFAMAIHSTSDLPLDVLCKALLKKGVRKFICTIMIDPDMLVK 228
>ref|YP_008519304.1| replicase P1 [Blueberry shock virus] gi|533113282|gb|AGU13190.1|
replicase P1 [Blueberry shock virus]
gi|533113289|gb|AGU13194.1| replicase P1 [Blueberry
shock virus]
Length = 1045
Score = 65.1 bits (157), Expect = 1e-08
Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Frame = +3
Query: 12 GLNPRSLIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREI----FSSAD-----E 164
G ++D GGN H KR R VH P+L RD R+ R I F SA E
Sbjct: 101 GTTTEKILDLGGNFVSHLKRGRYNVHSCCPLLDDRDGARFTERFISLKTFYSAHSEERHE 160
Query: 165 SIICRKRFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKK 293
+ C K F QCE ADYA+A+H+ D+ E+ +++ K VKK
Sbjct: 161 ASFCNKTFQQCEEHADYAMAIHAISDLPITELCQSLATKGVKK 203
>emb|CBH31364.1| protein 1a [Apple mosaic virus]
Length = 204
Score = 63.9 bits (154), Expect = 2e-08
Identities = 36/97 (37%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Frame = +3
Query: 30 LIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREIF---------SSADESIICRK 182
+ID GGN H KR R VH P+L RD R+ R I E+ C+
Sbjct: 108 VIDLGGNFVSHLKRRRYNVHSCCPLLDDRDGARFTERMISLKTYYRTHQDEKHEADYCKC 167
Query: 183 RFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKK 293
RF +C+ +ADY +A+H+T D+S +E+ +A+ K KK
Sbjct: 168 RFEECDRKADYVMAIHATSDLSLEELCKALANKGTKK 204
>gb|ACM63154.1| p1 protein [Bacopa chlorosis virus]
Length = 1054
Score = 63.5 bits (153), Expect = 3e-08
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Frame = +3
Query: 30 LIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREI-FSSADESI-------ICRKR 185
+ID GGN HAK+ RD VH P+L RD R+ R + +SA E C K+
Sbjct: 124 IIDLGGNYVTHAKQGRDNVHSCCPILDVRDGARHTDRYMSLASAVEKHHRDLPVDFCCKK 183
Query: 186 FSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKFFGVINYIPGI 326
F C +QA YA+A+HS D+ +A +++ V+K + P +
Sbjct: 184 FEDCNVQAPYAMAIHSISDIPITTVAHHCVRRGVRKLIATVMMDPAM 230
>ref|NP_041192.1| 125.7 kd protein [Alfalfa mosaic virus]
gi|137230|sp|P03589.1|ORF1A_AMVLE RecName:
Full=Replication protein 1a; Includes: RecName:
Full=ATP-dependent helicase; Includes: RecName:
Full=Methyltransferase gi|331425|gb|AAA46289.1| 125.7 kd
protein [Alfalfa mosaic virus]
Length = 1126
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Frame = +3
Query: 27 SLIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVR------------EIFSSADESI 170
S+ID GGN H K R VHC P+L +RD R R EI AD
Sbjct: 123 SIIDLGGNFVSHMKVKRHNVHCCCPILDARDGARLTERILSLKSYVRKHPEIVGEAD--- 179
Query: 171 ICRKRFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKF 296
C F +C +ADYA A+HST D+ E+A ++ +K V KF
Sbjct: 180 YCMDTFQKCSRRADYAFAIHSTSDLDVGELACSLDQKGVMKF 221
>gb|AGV15824.1| P1 [Alfalfa mosaic virus]
Length = 1126
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Frame = +3
Query: 27 SLIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVR------------EIFSSADESI 170
S+ID GGN H K R VHC P+L +RD R R EI AD
Sbjct: 123 SIIDLGGNFVSHMKVKRHNVHCCCPILDARDGARLTERILSLKSYVRKHPEIVGEAD--- 179
Query: 171 ICRKRFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKF 296
C F +C +ADYA A+HST D+ E+A ++ +K V KF
Sbjct: 180 YCMDTFQKCSRRADYAFAIHSTSDLDVGELACSLDQKGVMKF 221
>gb|AFQ94057.1| P1 protein, partial [Alfalfa mosaic virus]
Length = 348
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Frame = +3
Query: 27 SLIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVR------------EIFSSADESI 170
S+ID GGN H K R VHC P+L +RD R R EI AD
Sbjct: 117 SIIDLGGNFVSHMKVKRHNVHCCCPILDARDGARLTERILSLKSYVRKHPEIVGEAD--- 173
Query: 171 ICRKRFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKF 296
C F +C +ADYA A+HST D+ E+A ++ +K V KF
Sbjct: 174 YCMDTFQKCSRRADYAFAIHSTSDLDVGELACSLDQKGVMKF 215
>emb|CBX36144.1| 126 kDa protein [Alfalfa mosaic virus]
Length = 1126
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Frame = +3
Query: 27 SLIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVR------------EIFSSADESI 170
S+ID GGN H K R VHC P+L +RD R R EI AD
Sbjct: 123 SIIDLGGNFVSHMKVKRHNVHCCCPILDARDGARLTERILSLKSYVRKHPEIVGEAD--- 179
Query: 171 ICRKRFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKF 296
C F +C +ADYA A+HST D+ E+A ++ +K V KF
Sbjct: 180 YCMDTFQKCSRRADYAFAIHSTSDLDVGELACSLDQKGVMKF 221
>gb|ADO85715.1| P1 protein [Alfalfa mosaic virus]
Length = 1126
Score = 62.4 bits (150), Expect = 6e-08
Identities = 40/102 (39%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Frame = +3
Query: 27 SLIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVR------------EIFSSADESI 170
S+ID GGN H K R VHC P+L +RD R R EI AD
Sbjct: 123 SIIDLGGNFVSHMKVKRHNVHCCCPILDARDGARLTERILSLKSYVRKHPEIVGEAD--- 179
Query: 171 ICRKRFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKF 296
C F +C +ADYA A+HST D+ E+A ++ +K V KF
Sbjct: 180 YCMDTFQKCSRRADYAFAIHSTSDLDVGELACSLDQKGVMKF 221
>ref|YP_054422.1| replicase [Humulus japonicus latent virus]
gi|46276446|gb|AAS86438.1| replicase [Humulus japonicus
latent virus]
Length = 1041
Score = 62.4 bits (150), Expect = 6e-08
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Frame = +3
Query: 30 LIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREIFSSA---------DESIICRK 182
++D GGN H KR R VH P+L RD R+ R + A +E+ C
Sbjct: 108 ILDLGGNYVSHFKRGRFNVHSCCPLLDGRDGARHTERMLQYDAYKRANPRILEEADFCNC 167
Query: 183 RFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKFFGVINYIP 320
RF C A+YA+A+H+T D+ + R + KK VKKF I P
Sbjct: 168 RFEDCSHMANYAMAIHATSDMPLDVLCRTLAKKGVKKFICSIMATP 213
>ref|NP_604469.1| putative methyltransferase/helicase [Apple mosaic virus]
gi|5911259|gb|AAD55722.1|AF174584_1 putative
methyltransferase/helicase [apple mosaic virus]
Length = 1046
Score = 62.4 bits (150), Expect = 6e-08
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Frame = +3
Query: 30 LIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREIF---------SSADESIICRK 182
+ID GGN H KR R VH P+L RD R+ R I E+ C+
Sbjct: 108 VIDLGGNFISHLKRRRYNVHSCCPLLDDRDGARFTERMISLKTYYRTHQDEKHEADYCKC 167
Query: 183 RFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKFFGVINYIPGI 326
RF +C+ +ADY +A+H+T D+S +++ +A+ K KK I P +
Sbjct: 168 RFEECDRKADYVMAIHATSDLSLEKLCKALANKGTKKMIMSIMMDPNM 215
>gb|AFI24678.1| hypothetical protein 1 [Piura virus]
Length = 2336
Score = 62.0 bits (149), Expect = 8e-08
Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Frame = +3
Query: 36 DFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYK----------------VREIFSSADES 167
D GGN H R YVH P+LS+ D R+ V E + D
Sbjct: 146 DVGGNPTTHLNRGELYVHTCAPLLSNNDDKRHSAYKERLRRGNPRFKNLVYEKHVNGDSQ 205
Query: 168 IICRKRFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKFFGVINYIPGI 326
+IC +R C I+A+ I +HS+YD+S IA AM + + +GV ++ P +
Sbjct: 206 VICNRRSENCSIKAEVLIFLHSSYDMSLGNIADAMHRANARTAYGVFHFNPRV 258
>ref|YP_611154.1| putative viral replicase [Prune dwarf virus]
gi|1762420|gb|AAB39537.1| putative viral replicase
[prune dwarf virus]
Length = 1055
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Frame = +3
Query: 12 GLNPRSLIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREIF---------SSADE 164
G +++D GGN H K+ R VHC P+L RD R+ R + E
Sbjct: 107 GNTDETILDLGGNYISHLKQRRYNVHCCCPLLDVRDCARHTERLMQYTTYKTSRPDEVHE 166
Query: 165 SIICRKRFSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKF 296
C F C +Q YA+A+HST D+ E+ ++ KK V KF
Sbjct: 167 PNFCENTFQDCSLQGKYAMAIHSTSDLPLGELCESLRKKGVMKF 210
>ref|YP_762618.1| putative replicase [Streptocarpus flower break virus]
gi|90855255|emb|CAJ13996.1| putative replicase
[Streptocarpus flower break virus]
Length = 1105
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 30/123 (24%)
Frame = +3
Query: 36 DFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREI----------------------- 146
D GGN H + RDYVHC P L RD+ R+ ++
Sbjct: 107 DIGGNFASHLFKGRDYVHCCAPNLDIRDVARHTAQQDSIMNYSAKLESQQRVIPKFQLEA 166
Query: 147 ---FSSADESIICRKRFSQCEIQAD----YAIAVHSTYDVSPKEIARAMLKKKVKKFFGV 305
+++ S++C F CE + YA+A+HS YD+ E A+L+K V K F
Sbjct: 167 FNKYANNPRSVVCNNTFQTCEFEPSAERVYAVALHSIYDIPVDEFGAALLRKNVHKCFAA 226
Query: 306 INY 314
++
Sbjct: 227 FHF 229
>ref|YP_762617.1| putative replicase [Streptocarpus flower break virus]
gi|90855256|emb|CAJ13997.1| putative replicase
[Streptocarpus flower break virus]
Length = 1606
Score = 62.0 bits (149), Expect = 8e-08
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 30/123 (24%)
Frame = +3
Query: 36 DFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREI----------------------- 146
D GGN H + RDYVHC P L RD+ R+ ++
Sbjct: 107 DIGGNFASHLFKGRDYVHCCAPNLDIRDVARHTAQQDSIMNYSAKLESQQRVIPKFQLEA 166
Query: 147 ---FSSADESIICRKRFSQCEIQAD----YAIAVHSTYDVSPKEIARAMLKKKVKKFFGV 305
+++ S++C F CE + YA+A+HS YD+ E A+L+K V K F
Sbjct: 167 FNKYANNPRSVVCNNTFQTCEFEPSAERVYAVALHSIYDIPVDEFGAALLRKNVHKCFAA 226
Query: 306 INY 314
++
Sbjct: 227 FHF 229
>ref|NP_046152.1| unnamed protein product [Turnip vein-clearing virus]
gi|514836|gb|AAC02782.1| RNA replicase component [Turnip
vein-clearing virus]
Length = 1107
Score = 61.6 bits (148), Expect = 1e-07
Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 31/124 (25%)
Frame = +3
Query: 36 DFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYK-----------------------VREI 146
D GGN H + RDYVHC P L RDI R++ R
Sbjct: 107 DIGGNFSAHLFKGRDYVHCCMPNLDVRDIARHEGHKEAIYSYVNRLKRQQRPVPEYQRAA 166
Query: 147 FSSADES---IICRKRFSQCEIQA-----DYAIAVHSTYDVSPKEIARAMLKKKVKKFFG 302
F++ E+ + C K F QCE+ YA+A+HS YD+ +E A+L+K VK F
Sbjct: 167 FNNYAENPHFVHCDKPFQQCELTTAYGTDTYAVALHSIYDIPVEEFGSALLRKNVKTCFA 226
Query: 303 VINY 314
++
Sbjct: 227 AFHF 230
>ref|NP_046151.1| unnamed protein product [Turnip vein-clearing virus]
gi|3914883|sp|Q88920.1|RDRP_TVCV RecName: Full=Replicase
large subunit; AltName: Full=183 kDa protein; AltName:
Full=RNA-directed RNA polymerase; Contains: RecName:
Full=Replicase small subunit; AltName: Full=126 kDa
protein; AltName: Full=Methyltransferase/RNA helicase;
Short=MT/HEL gi|619645|gb|AAC02783.1| RNA replicase
read-through component [Turnip vein-clearing virus]
gi|1586167|prf||2203312A RNA replicase
Length = 1601
Score = 61.6 bits (148), Expect = 1e-07
Identities = 40/124 (32%), Positives = 56/124 (45%), Gaps = 31/124 (25%)
Frame = +3
Query: 36 DFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYK-----------------------VREI 146
D GGN H + RDYVHC P L RDI R++ R
Sbjct: 107 DIGGNFSAHLFKGRDYVHCCMPNLDVRDIARHEGHKEAIYSYVNRLKRQQRPVPEYQRAA 166
Query: 147 FSSADES---IICRKRFSQCEIQA-----DYAIAVHSTYDVSPKEIARAMLKKKVKKFFG 302
F++ E+ + C K F QCE+ YA+A+HS YD+ +E A+L+K VK F
Sbjct: 167 FNNYAENPHFVHCDKPFQQCELTTAYGTDTYAVALHSIYDIPVEEFGSALLRKNVKTCFA 226
Query: 303 VINY 314
++
Sbjct: 227 AFHF 230
>gb|ACU44508.1| p1 protein [Parietaria mottle virus]
Length = 1097
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Frame = +3
Query: 30 LIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREI-FSSADESI-------ICRKR 185
+ID GGN HAK R VH P+L RD R+ R + +SA E C K+
Sbjct: 122 IIDLGGNYVTHAKHGRSNVHSCCPILDVRDGARHTDRYMSLASAVEKHHKDLPVDFCCKK 181
Query: 186 FSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKFFGVINYIPGI 326
F C +QA YA+A+HS D+ +A+ +++ V+K + P +
Sbjct: 182 FEDCNVQAPYAMAIHSISDIPITTVAKHCVRRGVRKLIATVMMDPAM 228
>ref|YP_006446.1| p1 protein [Parietaria mottle virus] gi|40646787|gb|AAR88259.1| p1
protein [Parietaria mottle virus]
Length = 1098
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Frame = +3
Query: 30 LIDFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVREI-FSSADESI-------ICRKR 185
+ID GGN HAK R VH P+L RD R+ R + +SA E C K+
Sbjct: 122 IIDLGGNYVTHAKHGRSNVHSCCPILDVRDGARHTDRYMSLASAVEKHHKDLPVDFCCKK 181
Query: 186 FSQCEIQADYAIAVHSTYDVSPKEIARAMLKKKVKKFFGVINYIPGI 326
F C +QA YA+A+HS D+ +A+ +++ V+K + P +
Sbjct: 182 FEDCNVQAPYAMAIHSISDIPITTVAKHCVRRGVRKLIATVMMDPAM 228
>ref|YP_008802585.1| 129k replicase protein [Yellow tailflower mild mottle virus]
gi|556571615|gb|AGZ63346.1| 129k replicase protein
[Yellow tailflower mild mottle virus]
gi|556571620|gb|AGZ63350.1| 129k replicase protein
[Yellow tailflower mild mottle virus]
Length = 1119
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 32/125 (25%)
Frame = +3
Query: 36 DFGGNQPWHAKRNRDYVHCDNPVLSSRDIMRYKVR------------------------- 140
D GGN H + RDYVHC P L RD+MR++ +
Sbjct: 107 DIGGNFASHLFKGRDYVHCCMPNLDVRDVMRHENQKDAVEVYLGKLASKGRPIPHFQLPA 166
Query: 141 -EIFSSADESIICRKRFSQCE---IQAD---YAIAVHSTYDVSPKEIARAMLKKKVKKFF 299
E ++++ ++++C F QC+ Q D YA+A+HS YD+ E A+L+K + +
Sbjct: 167 FERYANSPDAVVCHDTFQQCKHDPFQHDGRKYAVALHSLYDIPADEFGAALLRKDIHTCY 226
Query: 300 GVINY 314
++
Sbjct: 227 AAFHF 231