BLASTX nr result
ID: Akebia25_contig00024716
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00024716
(226 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006429754.1| hypothetical protein CICLE_v10011150mg [Citr... 87 3e-15
ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
gb|EXC35004.1| hypothetical protein L484_017705 [Morus notabilis] 82 8e-14
ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 80 3e-13
ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containi... 79 9e-13
ref|XP_006836656.1| hypothetical protein AMTR_s00088p00046280 [A... 73 5e-11
ref|XP_007049204.1| Tetratricopeptide repeat-like superfamily pr... 72 1e-10
ref|XP_006362392.1| PREDICTED: pentatricopeptide repeat-containi... 70 4e-10
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253... 66 6e-09
ref|XP_007134845.1| hypothetical protein PHAVU_010G081100g [Phas... 64 3e-08
ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_003612258.1| Pentatricopeptide repeat-containing protein ... 56 5e-06
>ref|XP_006429754.1| hypothetical protein CICLE_v10011150mg [Citrus clementina]
gi|568855508|ref|XP_006481346.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like [Citrus sinensis]
gi|557531811|gb|ESR42994.1| hypothetical protein
CICLE_v10011150mg [Citrus clementina]
Length = 740
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/63 (63%), Positives = 54/63 (85%)
Frame = -2
Query: 192 MRSKLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNG 13
M++ L+SI GS +FNQN KITQLGKSGR+++AIK+F +MS +NTVT+NS+ISA AKNG
Sbjct: 1 MKASLKSIGNKGSYVFNQNKKITQLGKSGRVEEAIKMFSQMSQKNTVTYNSMISAYAKNG 60
Query: 12 RIS 4
R++
Sbjct: 61 RVN 63
>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = -2
Query: 192 MRSKLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNG 13
M+S L+S+ E+GS +F NLKITQLGKSG++ +AIKVF+ M+++NTVT NS+ISA AKNG
Sbjct: 1 MKSSLKSVGEHGSYVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNG 60
Query: 12 RIS 4
RIS
Sbjct: 61 RIS 63
>ref|XP_004305889.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Fragaria vesca subsp. vesca]
Length = 739
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/61 (65%), Positives = 52/61 (85%)
Frame = -2
Query: 183 KLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNGRIS 4
KL+SI E G+ +F+QNLKITQLGK GR+ +AIKVF +M+ RNTVT+NS+ISA AKNGR+
Sbjct: 2 KLRSIGEKGTQVFHQNLKITQLGKLGRIDEAIKVFSQMTQRNTVTYNSMISAYAKNGRVG 61
Query: 3 H 1
+
Sbjct: 62 N 62
>gb|EXC35004.1| hypothetical protein L484_017705 [Morus notabilis]
Length = 745
Score = 82.0 bits (201), Expect = 8e-14
Identities = 38/59 (64%), Positives = 52/59 (88%)
Frame = -2
Query: 183 KLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNGRI 7
K++S+ + G+ +F+QNLKITQLGKSGR+ +AIKVF +M+ +NTVT+NS+ISA AKNGRI
Sbjct: 2 KMRSVGDMGNHVFSQNLKITQLGKSGRIDEAIKVFSQMTQKNTVTFNSMISAYAKNGRI 60
>ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/64 (57%), Positives = 53/64 (82%)
Frame = -2
Query: 192 MRSKLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNG 13
M+ ++SI E GS +F QNL+I+QLG+SGR+++A+ VF KM+ RN VT+NS+ISA AKNG
Sbjct: 1 MKFNVKSIGEKGSYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNG 60
Query: 12 RISH 1
RI++
Sbjct: 61 RIAN 64
>ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 78.6 bits (192), Expect = 9e-13
Identities = 36/64 (56%), Positives = 53/64 (82%)
Frame = -2
Query: 192 MRSKLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNG 13
M+ ++SI E GS +F QNL+I+QLG+SGR+++A+ VF +M+ RN VT+NS+ISA AKNG
Sbjct: 1 MKFNVKSIGEKGSYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNG 60
Query: 12 RISH 1
RI++
Sbjct: 61 RIAN 64
>ref|XP_006836656.1| hypothetical protein AMTR_s00088p00046280 [Amborella trichopoda]
gi|548839216|gb|ERM99509.1| hypothetical protein
AMTR_s00088p00046280 [Amborella trichopoda]
Length = 602
Score = 72.8 bits (177), Expect = 5e-11
Identities = 32/60 (53%), Positives = 50/60 (83%)
Frame = -2
Query: 183 KLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNGRIS 4
+L+ + GS +F+QNLKIT K+GRL+DA+ +FEKM+++NTVTWN++ISA +K+G++S
Sbjct: 5 QLRVAAGGGSFLFSQNLKITNYTKAGRLRDAVALFEKMTHKNTVTWNAMISAYSKSGKLS 64
>ref|XP_007049204.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508701465|gb|EOX93361.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 747
Score = 71.6 bits (174), Expect = 1e-10
Identities = 32/62 (51%), Positives = 49/62 (79%)
Frame = -2
Query: 192 MRSKLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNG 13
M+ L+ + E + +FNQN ITQL KSG++++AI++F M++RNTVT+NS+ISA +KNG
Sbjct: 1 MKQNLKIMGEQANHLFNQNTNITQLAKSGKIEEAIQIFSGMTHRNTVTYNSMISAFSKNG 60
Query: 12 RI 7
+I
Sbjct: 61 KI 62
>ref|XP_006362392.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like isoform X1 [Solanum tuberosum]
gi|565393459|ref|XP_006362393.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X2 [Solanum tuberosum]
gi|565393461|ref|XP_006362394.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X3 [Solanum tuberosum]
gi|565393463|ref|XP_006362395.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X4 [Solanum tuberosum]
gi|565393465|ref|XP_006362396.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g02750-like isoform X5 [Solanum tuberosum]
Length = 742
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/53 (62%), Positives = 43/53 (81%)
Frame = -2
Query: 159 GSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNGRISH 1
G I QNLKITQLGK G++ +AI+VF ++++ NTVT+NS+ISA AKNGRI H
Sbjct: 7 GRTIIQQNLKITQLGKRGQIDEAIRVFNRITHPNTVTYNSMISAYAKNGRIIH 59
>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
lycopersicum]
Length = 13995
Score = 65.9 bits (159), Expect = 6e-09
Identities = 32/51 (62%), Positives = 41/51 (80%)
Frame = -2
Query: 159 GSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNGRI 7
G I QNLKITQLGK G++ +AI+VF +++ NTVT+NS+ISA AKNGRI
Sbjct: 1935 GRTIIQQNLKITQLGKRGQIDEAIRVFNGITHPNTVTYNSMISAYAKNGRI 1985
>ref|XP_007134845.1| hypothetical protein PHAVU_010G081100g [Phaseolus vulgaris]
gi|561007890|gb|ESW06839.1| hypothetical protein
PHAVU_010G081100g [Phaseolus vulgaris]
Length = 748
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/65 (43%), Positives = 46/65 (70%)
Frame = -2
Query: 195 QMRSKLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKN 16
+++ ++SI + + + NL+I LGK GR++DA ++F M+++N VT+NS+IS AKN
Sbjct: 2 KLKHGIRSIGRAANHVISHNLQIIHLGKLGRVEDAFRIFSNMTHKNLVTYNSMISMLAKN 61
Query: 15 GRISH 1
RISH
Sbjct: 62 ARISH 66
>ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 62.8 bits (151), Expect = 5e-08
Identities = 29/63 (46%), Positives = 46/63 (73%)
Frame = -2
Query: 195 QMRSKLQSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKN 16
+++ ++SI E G FN N +I QLGK G++++AI++F M+++N VT+NS+IS AKN
Sbjct: 2 KLKLGIRSIGEAGKHAFNHNRQIIQLGKLGKVEEAIRIFFNMTHKNLVTYNSMISVLAKN 61
Query: 15 GRI 7
RI
Sbjct: 62 ARI 64
>ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 907
Score = 56.2 bits (134), Expect = 5e-06
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = -2
Query: 177 QSISENGSLIFNQNLKITQLGKSGRLQDAIKVFEKMSNRNTVTWNSIISACAKNGRIS 4
+S E +FNQN KI LGK G++ +A +VF + ++N T+NS+++ AKNGR+S
Sbjct: 8 RSTLEQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVS 65