BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00024577
         (547 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...   175   8e-42
emb|CBI40152.3| unnamed protein product [Vitis vinifera]              174   1e-41
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   174   1e-41
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   174   2e-41
ref|XP_007219786.1| hypothetical protein PRUPE_ppa024567mg [Prun...   173   3e-41
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...   171   1e-40
ref|XP_002299207.2| hypothetical protein POPTR_0001s06460g [Popu...   165   6e-39
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   160   1e-37
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...   159   6e-37
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...   159   6e-37
ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E sub...   155   6e-36
ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E sub...   151   1e-34
ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   150   2e-34
gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycope...   150   2e-34
ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...   149   4e-34
gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus no...   149   6e-34
ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Caps...   147   1e-33
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V sub...   147   2e-33
ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi...   147   2e-33
ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V sub...   143   3e-32

>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score =  175 bits (443), Expect = 8e-42
 Identities = 88/181 (48%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATLFTPRKCFERAAEKCH+D L+SIVASCSWGKHV VGTG RF++LW+ +E+ L Q+
Sbjct: 1193 FTEATLFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGVRFDVLWDTREVELTQE 1252

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
            G +DV+N+L +V S++N +E+ +  LG E+DDL L +   + S SPE ++ + RP+F++ 
Sbjct: 1253 GGLDVFNFLHMV-STANVEEATTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDL 1311

Query: 363  LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQH-SDLENTATRSGWGTDNVQTQV 539
            +E D  +  +   +SNWE +SS    S   ++W VD++   +      S WGT+  +TQ 
Sbjct: 1312 VEFD-DKLGDLPEKSNWEKDSSFHTDSNGGKDWSVDKNVGTVAVPDVWSSWGTEKGKTQD 1370

Query: 540  S 542
            S
Sbjct: 1371 S 1371


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  174 bits (441), Expect = 1e-41
 Identities = 87/179 (48%), Positives = 118/179 (65%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATLFTPRKCFE+A+EKCH D LSSIVASCSWGKHVTVGTG+RF++LW+ KE+G  QD
Sbjct: 1245 FTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQD 1304

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
            G +D+Y++L LVRS S  +E ++  LG E++DL LE+  LEL +SPE  + + +P+F++S
Sbjct: 1305 GGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDS 1364

Query: 363  LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQHSDLENTATR----SGWGTDNV 527
             E   T +N                  G   +W V+Q+ +   +  +    S WGTD V
Sbjct: 1365 AEFQNTWENH---------------VPGSGGDWAVNQNKETTASTLKPSAWSSWGTDKV 1408


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  174 bits (441), Expect = 1e-41
 Identities = 87/179 (48%), Positives = 118/179 (65%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATLFTPRKCFE+A+EKCH D LSSIVASCSWGKHVTVGTG+RF++LW+ KE+G  QD
Sbjct: 1185 FTEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQD 1244

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
            G +D+Y++L LVRS S  +E ++  LG E++DL LE+  LEL +SPE  + + +P+F++S
Sbjct: 1245 GGIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDS 1304

Query: 363  LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQHSDLENTATR----SGWGTDNV 527
             E   T +N                  G   +W V+Q+ +   +  +    S WGTD V
Sbjct: 1305 AEFQNTWENH---------------VPGSGGDWAVNQNKETTASTLKPSAWSSWGTDKV 1348


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  174 bits (440), Expect = 2e-41
 Identities = 92/174 (52%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATLFTPRKCFE+AAEKCH D LSSIVASCSWGKHV VGTG+RF+ILW++KE+G  QD
Sbjct: 1180 FTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQD 1239

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
             V+DVYN+L +VRS  +E E  S  LG EI+D+ +E+   EL++SPE  +   +P+F++S
Sbjct: 1240 DVVDVYNFLHMVRSGKSE-EPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDS 1298

Query: 363  LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQHSDLENTATR---SGWG 515
             E +   DN    ES WE   SL A S    +W+ +++    N++     SGWG
Sbjct: 1299 AEFEHCLDN-YPGESKWEKAPSLGAVSTGGGQWESNENGKATNSSDGNDWSGWG 1351


>ref|XP_007219786.1| hypothetical protein PRUPE_ppa024567mg [Prunus persica]
           gi|462416248|gb|EMJ20985.1| hypothetical protein
           PRUPE_ppa024567mg [Prunus persica]
          Length = 792

 Score =  173 bits (438), Expect = 3e-41
 Identities = 86/174 (49%), Positives = 122/174 (70%), Gaps = 1/174 (0%)
 Frame = +3

Query: 3   FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
           FTEATLFTPRKCFERAAEKCH+D L+SIVASCSWGKHV VGTG RF++LW+ +E+ L Q+
Sbjct: 206 FTEATLFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGARFDVLWDTREVELTQE 265

Query: 183 GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
           G +DV+N+L +V S++N +E+ +  LG E+DDL L +   + S SPE ++ + RP+F++ 
Sbjct: 266 GGLDVFNFLHMV-STANVEEATTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFEDL 324

Query: 363 LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQH-SDLENTATRSGWGTD 521
           +E D  +  +   +SNWE +SS    S   ++W VD++   +      S WGTD
Sbjct: 325 VEFD-DKLGDLPEKSNWEKDSSFHTDSNGGKDWSVDKNVGTVAVPDVWSSWGTD 377


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score =  171 bits (432), Expect = 1e-40
 Identities = 92/191 (48%), Positives = 121/191 (63%), Gaps = 14/191 (7%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATLFTPRKCFE+AAEKCH D LSSIVASC+WGKHVTVGTG+ F++LW+ KE  LN +
Sbjct: 1186 FTEATLFTPRKCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPE 1245

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
            G MDVY++L +VRS++  +ES +  LG E+DDL LE+   + ++SPE ++   +P F++S
Sbjct: 1246 GSMDVYSFLNMVRSTAGGEESVTACLGAEVDDLMLEDE--DWNLSPEHNSSSDKPTFEDS 1303

Query: 363  LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQHSDL--------------ENTAT 500
             E      N+   ESNWE  SSL  +S  S  W VD++                  N   
Sbjct: 1304 AEFQDFLGNQ-PAESNWEKISSLKDRSRSSGNWDVDKNDGAVKEKPWSLGMNTAEANDVA 1362

Query: 501  RSGWGTDNVQT 533
             SGW T   +T
Sbjct: 1363 SSGWDTAAART 1373


>ref|XP_002299207.2| hypothetical protein POPTR_0001s06460g [Populus trichocarpa]
           gi|550346662|gb|EEE84012.2| hypothetical protein
           POPTR_0001s06460g [Populus trichocarpa]
          Length = 888

 Score =  165 bits (418), Expect = 6e-39
 Identities = 84/158 (53%), Positives = 112/158 (70%)
 Frame = +3

Query: 3   FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
           FTEATLFTPRKCFE+AAEKCH D+LSSIVASCSWGKHVTVGTG+RF++LW+ KE  LN +
Sbjct: 154 FTEATLFTPRKCFEKAAEKCHTDYLSSIVASCSWGKHVTVGTGSRFDVLWDTKEACLNPE 213

Query: 183 GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
           G +D Y++L +VRS++  +ES +  LG E+DDL LE+   + ++SPE  +   +P F++S
Sbjct: 214 GGIDAYSFLNMVRSTAGGEESVTACLGAEVDDLILEDE--DWNLSPEHHSSSDKPTFEDS 271

Query: 363 LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQH 476
            E      N+   ESNW   SSL   S  +  W VD++
Sbjct: 272 AEFQDFLGNQ-PAESNWGKASSLKDGSWSAGNWDVDKN 308


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  160 bits (406), Expect = 1e-37
 Identities = 86/174 (49%), Positives = 115/174 (66%), Gaps = 3/174 (1%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            F      TPRKCFE+AAEKCH D LSSIVASCSWGKHV VGTG+RF+ILW++KE+G  QD
Sbjct: 1240 FLNGXYTTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQD 1299

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
             V+DVYN+L +VRS  +E E  S  LG EI+D+ +E+   EL++SPE  +   +P+F++S
Sbjct: 1300 DVVDVYNFLHMVRSGKSE-EPTSACLGEEIEDIMVEDEYGELTLSPEPFSTSEKPVFEDS 1358

Query: 363  LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQHSDLENTATR---SGWG 515
             E +   DN    ES WE   SL A S    +W+ +++    N++     SGWG
Sbjct: 1359 AEFEHCLDN-YPGESKWEKAPSLGAVSTGGGQWESNENGKATNSSDGNDWSGWG 1411


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score =  159 bits (401), Expect = 6e-37
 Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 11/189 (5%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            F+EATLFTPRKCFERAAEKCH+D LSSIVASCSWGKHV VGTG+RF++LW++KE+G +Q 
Sbjct: 1181 FSEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQK 1240

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
              +DVYN+L ++ SS++   S +  LG E+DDL   +   E S+SPE   G  +P+F+++
Sbjct: 1241 SGIDVYNFLHML-SSASGPSSTTTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDA 1299

Query: 363  LEQDKTRDNENTRESNWEINSSL--VAKSGRSREW-KVDQHSD-----LENTATRS---G 509
             + +   D +   ES+WE   SL  V+    S  W K  +  D     L +T  +S    
Sbjct: 1300 ADFENDLDFQ-PAESSWEKGVSLDKVSSWNVSSAWNKKAEDGDKFAAALTSTTKQSDWCD 1358

Query: 510  WGTDNVQTQ 536
            WGT   +TQ
Sbjct: 1359 WGTSKSKTQ 1367


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score =  159 bits (401), Expect = 6e-37
 Identities = 89/189 (47%), Positives = 122/189 (64%), Gaps = 11/189 (5%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            F+EATLFTPRKCFERAAEKCH+D LSSIVASCSWGKHV VGTG+RF++LW++KE+G +Q 
Sbjct: 1181 FSEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQK 1240

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
              +DVYN+L ++ SS++   S +  LG E+DDL   +   E S+SPE   G  +P+F+++
Sbjct: 1241 SGIDVYNFLHML-SSASGPSSTTTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDA 1299

Query: 363  LEQDKTRDNENTRESNWEINSSL--VAKSGRSREW-KVDQHSD-----LENTATRS---G 509
             + +   D +   ES+WE   SL  V+    S  W K  +  D     L +T  +S    
Sbjct: 1300 ADFENDLDFQ-PAESSWEKGVSLDKVSSWNVSSAWNKKAEDGDKFAAALTSTTKQSDWCD 1358

Query: 510  WGTDNVQTQ 536
            WGT   +TQ
Sbjct: 1359 WGTSKSKTQ 1367


>ref|XP_004308588.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Fragaria
            vesca subsp. vesca]
          Length = 1991

 Score =  155 bits (392), Expect = 6e-36
 Identities = 82/155 (52%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATLFTP+KCFERAAEKCH+D LSSIVASCSWGKHV VGTG+RFEILW+ KE GLN+ 
Sbjct: 1188 FTEATLFTPKKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFEILWDTKEGGLNEV 1247

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDL--DLENGQLELSISPEQDTGYGRPIFD 356
            G +DV+N+L +V +++N +E  +  LG EIDDL  D ENG  ++S+SPE ++   +P+F+
Sbjct: 1248 GGVDVFNFLHMV-NAANGEELTTAALGTEIDDLVPDYENG--DVSLSPEHNSSSDKPVFE 1304

Query: 357  ESLEQDKTRDNENTRESNWEINSSLVAKSGRSREW 461
            + +E     +N    +S+W+   S+   S   ++W
Sbjct: 1305 DIVEFPDNFENV-PGKSSWD---SIYTASTGGKDW 1335


>ref|XP_004511031.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cicer
            arietinum]
          Length = 2263

 Score =  151 bits (381), Expect = 1e-34
 Identities = 87/202 (43%), Positives = 118/202 (58%), Gaps = 21/202 (10%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FT+ATLFTPRKCFERAAEK H D LSSIVASCSWGKHV VGTG+RF+I+W+ KE+  N+ 
Sbjct: 1180 FTDATLFTPRKCFERAAEKRHADSLSSIVASCSWGKHVAVGTGSRFDIVWDPKEVKSNEI 1239

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
              MDVYN+L +V+  +N  E N+  LG +IDDL L++  ++  +SPE  +G+   +FDES
Sbjct: 1240 EGMDVYNFLNMVKGLANGDEENNACLGEDIDDL-LDDDNMDWGMSPEHTSGFD-AVFDES 1297

Query: 363  LE---------QDKTRDNENTRESNW--------EINSSLVAK----SGRSREWKVDQHS 479
             E          D  +D   T  ++W        EI   +       SG +++WK D   
Sbjct: 1298 FELLNGSTSNGWDSNKDQNKTTTNDWSGWGQNKSEIQVDVAETDQWGSGSTQKWKAD--I 1355

Query: 480  DLENTATRSGWGTDNVQTQVSP 545
              E+++    W T   Q    P
Sbjct: 1356 TKEDSSKSGAWETGTNQNSDQP 1377


>ref|XP_004230024.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1 [Solanum lycopersicum]
          Length = 1632

 Score =  150 bits (379), Expect = 2e-34
 Identities = 87/180 (48%), Positives = 111/180 (61%), Gaps = 9/180 (5%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATLFTPRKCFERAAEKCH+D LSSIVASCSWGKHV VGTG+RFE+L N + +  N  
Sbjct: 1185 FTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIP 1244

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
               DVY++L LVR++S ++   +  LG EID+L+ E+  + L +SP +D+G   P F++ 
Sbjct: 1245 DTRDVYSFLHLVRNTSAQEVEGTSCLGAEIDELE-EDEDMGLYLSPNRDSGSEMPTFEDR 1303

Query: 363  LEQDKTRDNENTRE-----SNWEINSSLVAKSGRSREWKVDQHSDLENTATR----SGWG 515
             E D    NEN  E     S WE  SS   KSG S +      +  E    +    S WG
Sbjct: 1304 AEFDY---NENLDEGKPSGSAWEKASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSAWG 1360


>gb|AAY89359.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1127

 Score =  150 bits (379), Expect = 2e-34
 Identities = 87/180 (48%), Positives = 111/180 (61%), Gaps = 9/180 (5%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATLFTPRKCFERAAEKCH+D LSSIVASCSWGKHV VGTG+RFE+L N + +  N  
Sbjct: 736  FTEATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFEVLLNTRNVEWNIP 795

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
               DVY++L LVR++S ++   +  LG EID+L+ E+  + L +SP +D+G   P F++ 
Sbjct: 796  DTRDVYSFLHLVRNTSAQEVEGTSCLGAEIDELE-EDEDMGLYLSPNRDSGSEMPTFEDR 854

Query: 363  LEQDKTRDNENTRE-----SNWEINSSLVAKSGRSREWKVDQHSDLENTATR----SGWG 515
             E D    NEN  E     S WE  SS   KSG S +      +  E    +    S WG
Sbjct: 855  AEFDY---NENLDEGKPSGSAWEEASSGSVKSGGSWDMAGKTQNGAEEGVNQSDSWSSWG 911


>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score =  149 bits (376), Expect = 4e-34
 Identities = 83/194 (42%), Positives = 114/194 (58%), Gaps = 21/194 (10%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATLFTPRKCFE+AAEKCH D LSS+VA+CSWGKHV VGTG+RF++LW  +    NQD
Sbjct: 1183 FTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQD 1242

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
              +DVY++L +VRSS+  +ES++  LG E+D L+    + + S+SPE +    +P+F++ 
Sbjct: 1243 DGVDVYDFLHMVRSSTGIEESDTGCLGEEVDGLE---DEFDWSLSPEHNLCSDKPVFEDL 1299

Query: 363  LEQ-------------DKTRDNENTRESNWE-INSSLVAKSGRSR---EWKVDQHSDLEN 491
            +E              D   D   + E  WE + +SL   S   R    W       LE 
Sbjct: 1300 VEDQSWLENKQENANWDSEADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEK 1359

Query: 492  TAT----RSGWGTD 521
              +     SGWGT+
Sbjct: 1360 AGSPSRKPSGWGTE 1373


>gb|EXB62675.1| DNA-directed RNA polymerase E subunit 1 [Morus notabilis]
          Length = 2054

 Score =  149 bits (375), Expect = 6e-34
 Identities = 82/182 (45%), Positives = 116/182 (63%), Gaps = 4/182 (2%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATL TP++CFERAAEKCH+D L+SIVASCSWGKHV VGTG+RF+ILW+ +++  NQ 
Sbjct: 1182 FTEATLITPKRCFERAAEKCHVDSLTSIVASCSWGKHVAVGTGSRFDILWDTRKVEFNQA 1241

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
            G +DV N+L +V S++  +E+++  LG EIDDL   +   EL +SPE +    RP+F++ 
Sbjct: 1242 GGVDVNNFLHMV-STAYGEEASTACLGEEIDDLMPGDDIAELCLSPE-NFNSDRPVFEDI 1299

Query: 363  LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQHSDLENTATR----SGWGTDNVQ 530
             E     + +   +S+W+  SS  + S   +EW         N  T+    S WGT N +
Sbjct: 1300 DEFQDISEKDLPGKSSWDNLSSFRSGSSSGKEW-----GSNNNVGTKYDVGSSWGTANKE 1354

Query: 531  TQ 536
             Q
Sbjct: 1355 EQ 1356


>ref|XP_006293553.1| hypothetical protein CARUB_v10022497mg [Capsella rubella]
            gi|482562261|gb|EOA26451.1| hypothetical protein
            CARUB_v10022497mg [Capsella rubella]
          Length = 1959

 Score =  147 bits (372), Expect = 1e-33
 Identities = 81/171 (47%), Positives = 108/171 (63%), Gaps = 1/171 (0%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATL TPRKCFE+AAEKCH D LS++V SCSWGK V VGTG++FE+LWN+KE GL+  
Sbjct: 1182 FTEATLITPRKCFEKAAEKCHTDSLSTVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDK 1241

Query: 183  GVMDVYNYLQLVRS-SSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDE 359
               DVY++LQ+VRS +S++   +SP  G ++     E    E + SPE+D+  G P F++
Sbjct: 1242 EETDVYSFLQMVRSTTSSDAFVSSP--GFDV----TEEEMAEWAESPERDSALGEPKFED 1295

Query: 360  SLEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQHSDLENTATRSGW 512
            S E     D+    ESNWE +SS         EW V + +  E+  T S W
Sbjct: 1296 SAEFQNLHDDGKQSESNWEKSSSWDNGCSGGSEWGVSKSTGGESN-TESNW 1345


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2020

 Score =  147 bits (371), Expect = 2e-33
 Identities = 75/172 (43%), Positives = 110/172 (63%), Gaps = 1/172 (0%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FT+ATLFTP+KCFERAAEKCH D LSSIVASCSWGKHV VGTG++F+I+W+  E+  N+ 
Sbjct: 1182 FTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDIVWDSSEIKSNEI 1241

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
              MDVY++L +V+S +N +E     LG +IDDL LE   ++L +SP+ ++G+   +F+E+
Sbjct: 1242 EGMDVYSFLHMVKSVTNGEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGF-EAVFEEN 1299

Query: 363  LEQDKTRDNENTRESNWEINSSLV-AKSGRSREWKVDQHSDLENTATRSGWG 515
             E         +  + W+++S+   +K+     W          TA  + WG
Sbjct: 1300 PEV-----LNGSTSNGWDVSSNQTQSKTNEWSGWASSNKDGRSETAQENSWG 1346


>ref|XP_002879839.1| NRPD1b [Arabidopsis lyrata subsp. lyrata] gi|297325678|gb|EFH56098.1|
            NRPD1b [Arabidopsis lyrata subsp. lyrata]
          Length = 1947

 Score =  147 bits (370), Expect = 2e-33
 Identities = 80/179 (44%), Positives = 110/179 (61%), Gaps = 1/179 (0%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FTEATL TPR+CFE+AAEKCH D LS++V SCSWGK V VGTG++FE+LWN+KE GL+  
Sbjct: 1182 FTEATLITPRRCFEKAAEKCHTDSLSTVVGSCSWGKRVDVGTGSQFELLWNQKETGLDDK 1241

Query: 183  GVMDVYNYLQLVRSSSN-EQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDE 359
               DVY++LQ+VRS++N +   +SP  G ++     E    E + SPE+D+  G P F++
Sbjct: 1242 EETDVYSFLQMVRSTTNADAYVSSP--GFDV----TEEEMAEWAESPERDSALGEPKFED 1295

Query: 360  SLEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQHSDLENTATRSGWGTDNVQTQ 536
            S E     D     ESNWE +SS         EW V +++  E     +   T NV+ +
Sbjct: 1296 SAEFQNLHDEGKPSESNWEKSSSWDNGCSGGSEWGVSKNTGGEANPESNWEKTTNVEKE 1354


>ref|XP_006598109.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Glycine max]
          Length = 2082

 Score =  143 bits (360), Expect = 3e-32
 Identities = 75/174 (43%), Positives = 104/174 (59%)
 Frame = +3

Query: 3    FTEATLFTPRKCFERAAEKCHIDFLSSIVASCSWGKHVTVGTGTRFEILWNKKEMGLNQD 182
            FT+ATLFTP+KCFERAAEKCH D LSSIVASCSWGKHV VGTG++F+++W+  E+  N+ 
Sbjct: 1182 FTDATLFTPKKCFERAAEKCHTDSLSSIVASCSWGKHVAVGTGSKFDVVWDANEIKSNEI 1241

Query: 183  GVMDVYNYLQLVRSSSNEQESNSPWLGGEIDDLDLENGQLELSISPEQDTGYGRPIFDES 362
              MDVY++L +V+S +N +E     LG +IDDL LE   ++L +SP+ ++G+   +F+E+
Sbjct: 1242 EGMDVYSFLHMVKSFTNGEEETDACLGEDIDDL-LEEEYMDLGMSPQHNSGF-EAVFEEN 1299

Query: 363  LEQDKTRDNENTRESNWEINSSLVAKSGRSREWKVDQHSDLENTATRSGWGTDN 524
             E                     V     S  W V  +     T   SGW + N
Sbjct: 1300 PE---------------------VLNGSTSNGWDVSSNQGESKTNEWSGWASSN 1332