BLASTX nr result
ID: Akebia25_contig00024244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00024244
(4752 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 546 e-165
ref|XP_007221295.1| hypothetical protein PRUPE_ppa024499mg, part... 536 e-164
ref|XP_007206823.1| hypothetical protein PRUPE_ppa025991mg [Prun... 504 e-151
ref|XP_007198961.1| hypothetical protein PRUPE_ppa020671mg, part... 489 e-151
ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, part... 493 e-149
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 486 e-148
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun... 476 e-143
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The... 456 e-138
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 460 e-137
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia] 457 e-136
ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prun... 447 e-134
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 441 e-132
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 431 e-129
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 431 e-129
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 430 e-128
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 425 e-128
gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 425 e-127
gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 428 e-127
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] 414 e-126
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The... 455 e-124
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 546 bits (1406), Expect(2) = e-165
Identities = 300/592 (50%), Positives = 376/592 (63%), Gaps = 17/592 (2%)
Frame = +2
Query: 2225 KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLDDILDMIAGATI 2383
KGF+RES++PC VP LLTPK D WRMC KITI YRFPIPRLDD+LDM+ G+ I
Sbjct: 649 KGFIRESLSPCGVPALLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVI 708
Query: 2384 FSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL*GL*HNS*DPV 2563
FSKI+L+SGY QI IR GDEWKT+FK DGLY
Sbjct: 709 FSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLY---------------------------- 740
Query: 2564 *VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFDDIVIYSLSGT 2743
E LVMPF LTN PST M++MTQVL+ FIG+F++VYFDDI+IYS
Sbjct: 741 -------------EWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYS---- 783
Query: 2744 TPNSLETSLQCS*ERTRSVPQEVF-IHVQXXXXXXXXFPLTRSV--------DPEKIKAI 2896
S E + + R++ E F I+++ V DPEKIKAI
Sbjct: 784 --RSCEDHEEHLKQVMRTLRAEKFYINLKKCTFMSPSVVFLGFVVSSKGVETDPEKIKAI 841
Query: 2897 VEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNATTKAFKEIKS 3076
V+W P NIHEVRSFHG+ATFYR FI+ F+SIM+PIT C++ F WT A KAF+EIKS
Sbjct: 842 VDWPVPTNIHEVRSFHGMATFYRRFIRNFSSIMAPITECMKPGLFIWTKAANKAFEEIKS 901
Query: 3077 RITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYSTYDKKF 3256
++ PI+ LPDF KVFEVACDAS V IG VLSQE H + +F++KLN AK+KYSTYD +F
Sbjct: 902 KMVNPPILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEF 961
Query: 3257 YVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFVLEHNAG 3436
Y VV ++R+W+HYL ++FVL+SDH+ALRYLNSQKKLN RHAKW F++ +TF L+H AG
Sbjct: 962 YAVVQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSFLQLFTFNLKHCAG 1021
Query: 3437 IENKFADTMSRKVALL-HYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIRSNREFV 3613
IENK AD +SRK LL + T + E ++ Y DF ++Y+S+ + +F
Sbjct: 1022 IENKVADALSRKALLLVNMSTTTI--GFEELKHCYDNDADFGDVYSSLLSGSKATCIDFQ 1079
Query: 3614 LKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSLKQDVAR 3793
+ +G+ +P ++WELH G+ HF RDKTI LVEDRF+WPSLK+DV +
Sbjct: 1080 ILEGYLFYKNRLCLPRTSLRDHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWK 1139
Query: 3794 STAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
QCR CQ+ K K NT LYT LPVP W+D+SMDFVLG P T R D I
Sbjct: 1140 VIKQCRACQVGKGSKQNTGLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSI 1191
Score = 68.2 bits (165), Expect(2) = e-165
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P +L +F D++P +LP ELPP+ DIQH IDLIP A+L NL YRMNP E+ E
Sbjct: 583 PANARKILDDFSDLWPVELPNELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAE 638
>ref|XP_007221295.1| hypothetical protein PRUPE_ppa024499mg, partial [Prunus persica]
gi|462417929|gb|EMJ22494.1| hypothetical protein
PRUPE_ppa024499mg, partial [Prunus persica]
Length = 1364
Score = 536 bits (1382), Expect(2) = e-164
Identities = 285/594 (47%), Positives = 370/594 (62%), Gaps = 11/594 (1%)
Frame = +2
Query: 2201 EVNSQAS---KKGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLD 2350
E+N+Q KGF+R S++ C VP LLTPK D WRMC KIT+ YRFPIPRL+
Sbjct: 590 ELNTQIQGLLDKGFIRHSLSSCAVPVLLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLE 649
Query: 2351 DILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL 2530
+L+ +AG+ FSKI+L+SGY QI IR GDEWKT FK DGLY
Sbjct: 650 AMLEELAGSKWFSKIDLRSGYHQIRIREGDEWKTAFKTPDGLY----------------- 692
Query: 2531 *GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYF 2710
E LVMPF ++N PST M+VMT VLR +IGKFL+VYF
Sbjct: 693 ------------------------EWLVMPFGMSNAPSTFMRVMTHVLRPYIGKFLVVYF 728
Query: 2711 DDIVIYSLSGTTPNSLETSLQCS*ERTRSVPQE-VFIHVQXXXXXXXXFPLTRSVDPEKI 2887
DDI+IYS +S E LQ + QE +F+++ ++ DP+K+
Sbjct: 729 DDILIYS------HSKEDHLQHLRTIFHMLRQEKLFVNL-------------KNADPDKV 769
Query: 2888 KAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNATTKAFKE 3067
AIV W P + E RSFHGLA+FYR FI F++IM+PIT C+++ EF+WT+A T+AF+
Sbjct: 770 HAIVNWPLPSTLTETRSFHGLASFYRRFIPSFSTIMAPITDCMKQGEFRWTHAATRAFEA 829
Query: 3068 IKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYSTYD 3247
+K ++TEAP++ P+ KVFEVACDAS V IGGVLSQE H + YFN+KLN+AKQKYSTYD
Sbjct: 830 LKQKMTEAPVLRHPELTKVFEVACDASGVGIGGVLSQEGHLVAYFNEKLNEAKQKYSTYD 889
Query: 3248 KKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFVLEH 3427
K+FY +V +LRYW++YLL +FVL+SDH+ALRYL+SQ+ ++ RH KW E+++ +TFV+ H
Sbjct: 890 KEFYAIVRALRYWQYYLLPNEFVLYSDHQALRYLHSQRNVSSRHIKWTEYLQIFTFVIRH 949
Query: 3428 NAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIRSNRE 3607
G++NK AD +SR+ V+ R + +
Sbjct: 950 RPGVDNKVADALSRE----------------------------------VTAGNRRDHVD 975
Query: 3608 FVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSLKQDV 3787
F+L+DG+ IP FLVWELH G+A HF +DKTI LV DRFYWPSLK+DV
Sbjct: 976 FLLRDGYLFRGTQLCIPRTSLRDFLVWELHAGGLAGHFGKDKTITLVADRFYWPSLKRDV 1035
Query: 3788 ARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
A AQC TCQLAK +K NT LYT LP+PH+ W+D+SMDFVLG P T R HD I
Sbjct: 1036 AHILAQCCTCQLAKARKQNTGLYTPLPIPHTPWKDLSMDFVLGLPKTARGHDSI 1089
Score = 71.6 bits (174), Expect(2) = e-164
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
PE + +L EF D+ DDLP ELPP+ DIQH IDL+P + LLNL HYRMN E E
Sbjct: 535 PEPLHQLLNEFSDVMLDDLPNELPPMRDIQHAIDLVPGSQLLNLPHYRMNSSERAE 590
>ref|XP_007206823.1| hypothetical protein PRUPE_ppa025991mg [Prunus persica]
gi|462402465|gb|EMJ08022.1| hypothetical protein
PRUPE_ppa025991mg [Prunus persica]
Length = 1274
Score = 504 bits (1299), Expect(2) = e-151
Identities = 273/585 (46%), Positives = 354/585 (60%), Gaps = 10/585 (1%)
Frame = +2
Query: 2225 KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLDDILDMIAGATI 2383
KGF+R S++PC VP LLTPK D W MC KI + YRFPIPRL+D+LD +AG+
Sbjct: 386 KGFIRHSLSPCAVPVLLTPKKDCSWGMCVDSCAVNKIIVKYRFPIPRLEDMLDDLAGSQW 445
Query: 2384 FSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL*GL*HNS*DPV 2563
FSKI+L+SGY QI IR GDEWKT FK DGLY
Sbjct: 446 FSKIDLRSGYHQISIREGDEWKTAFKTPDGLY---------------------------- 477
Query: 2564 *VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFDDIVIYSLSGT 2743
E LVMPF ++N PST M+VMT VLR +IGKFL+VYFDDI+IYS S
Sbjct: 478 -------------EWLVMPFGMSNAPSTFMRVMTHVLRPYIGKFLVVYFDDILIYSRSRE 524
Query: 2744 TPNSLETSLQCS*ERTR---SVPQEVFIHVQXXXXXXXXFPLTRSVDPEKIKAIVEWHKP 2914
++ + + + ++ + F+ Q S DP K++AI+ W P
Sbjct: 525 EHIQHLRTIFSTLRKEKLYANLKKCSFLQPQVLFLGFNISAAGVSTDPAKVEAIINWPTP 584
Query: 2915 QNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNATTKAFKEIKSRITEAP 3094
+ E RSFHGL +FYR FI GF+ IM+ IT C+++ F WT+A KAF +K ++T+AP
Sbjct: 585 TTLTEARSFHGLTSFYRRFIPGFSIIMALITDCMKQGAFLWTHAAAKAFTILKQKMTQAP 644
Query: 3095 IMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYSTYDKKFYVVV*S 3274
+ PD KVFEV CDAS V IGGVLSQE H + YF++KLN+AKQ+YST+DK+FY VV +
Sbjct: 645 VFRHPDLTKVFEVTCDASGVGIGGVLSQEGHPVAYFSEKLNEAKQRYSTHDKEFYDVVQA 704
Query: 3275 LRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFVLEHNAGIENKFA 3454
LRYW++YLL +FVL+SDH+AL+YL+SQ+ + + I+NK A
Sbjct: 705 LRYWQYYLLPNEFVLYSDHQALKYLHSQRTI---------------------SSIDNKVA 743
Query: 3455 DTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIRSNREFVLKDGFCL 3634
D +SR +LH T V + I+ +Y CPDF ++ VS R +F+ +DGF
Sbjct: 744 DALSRVATILHTMTVQV-NGFDRIKTEYSSCPDFGIIFHEVSNGNRREYVDFITRDGFLF 802
Query: 3635 EVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSLKQDVARSTAQCRT 3814
IP FLVWELH G+A HF +DKTI LVED FYWPSLK+DVA +QCRT
Sbjct: 803 RRTQLCIPRTSLLEFLVWELHGGGLAGHFGKDKTIALVEDHFYWPSLKRDVAHLISQCRT 862
Query: 3815 CQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
CQLAK +K NT +YT LP+PH+ W+D+SMDFVLG P T R +D I
Sbjct: 863 CQLAKARKRNTGVYTPLPIPHAPWKDLSMDFVLGLPKTSRGYDSI 907
Score = 63.2 bits (152), Expect(2) = e-151
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +3
Query: 2031 EQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIE 2186
E + +L EF ++ PDDLP +LPP +IQH IDL+P + + NL +YRMNP E
Sbjct: 321 EPIQQLLTEFSNVIPDDLPDDLPPAREIQHAIDLVPGSQIPNLPYYRMNPPE 372
>ref|XP_007198961.1| hypothetical protein PRUPE_ppa020671mg, partial [Prunus persica]
gi|462394256|gb|EMJ00160.1| hypothetical protein
PRUPE_ppa020671mg, partial [Prunus persica]
Length = 1460
Score = 489 bits (1259), Expect(3) = e-151
Identities = 265/578 (45%), Positives = 345/578 (59%), Gaps = 12/578 (2%)
Frame = +2
Query: 2201 EVNSQAS---KKGFVRESMNPCVVPCLLTPKNDSYWRMCKITI*YRFPIPRLDDILDMIA 2371
E+N+Q KGF+R S++PC VP L TPK D WRMC + I ++ D+LD +A
Sbjct: 654 ELNTQIQGLLDKGFIRHSLSPCAVPVLFTPKKDGSWRMCVDSR----AINKITDMLDELA 709
Query: 2372 GATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL*GL*HNS 2551
G+ FSKI+L SGY QI IR GDEWKT FK DGLY
Sbjct: 710 GSKWFSKIDLHSGYHQIRIREGDEWKTAFKTPDGLY------------------------ 745
Query: 2552 *DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFDDIVIYS 2731
E LVMPF ++N PST M+VMT V R +IGKFL+VYFDDI+IYS
Sbjct: 746 -----------------EWLVMPFGMSNAPSTFMRVMTHVFRPYIGKFLVVYFDDILIYS 788
Query: 2732 LSGTTPNSLETSLQCS*ERTRSVPQEV---------FIHVQXXXXXXXXFPLTRSVDPEK 2884
+S E LQ + QE F+ Q + S DP+K
Sbjct: 789 ------HSKEDHLQHLRTIFHMLRQEKLFVNLKKCSFLQEQVLFLGFIVSAASISADPDK 842
Query: 2885 IKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNATTKAFK 3064
+ AIV W P + E RSFHGLA+FYR FI F++IM+PIT C+++ EF+WT+ATT+AF+
Sbjct: 843 VHAIVNWPLPSTLTETRSFHGLASFYRRFIPSFSTIMAPITDCMKQGEFRWTHATTRAFE 902
Query: 3065 EIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYSTY 3244
+K ++TEAP++ P+ KVFEVACDAS V IGGVLSQE H + YF++KLN+AKQKYSTY
Sbjct: 903 ALKQKMTEAPVLCHPELTKVFEVACDASGVGIGGVLSQEGHHVAYFSEKLNEAKQKYSTY 962
Query: 3245 DKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFVLE 3424
DK+FY +V +LRYW++YLL +FVL+SDH+ALRYL+SQ+ ++ RH KW E+++ +TFV+
Sbjct: 963 DKEFYAIVRALRYWQYYLLPNEFVLYSDHQALRYLHSQRNVSSRHIKWTEYLQIFTFVIR 1022
Query: 3425 HNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIRSNR 3604
H G++NK AD +SR+ V+ +
Sbjct: 1023 HRPGVDNKVADALSRE----------------------------------VTTGNRHDHV 1048
Query: 3605 EFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSLKQD 3784
+F+L+DG+ IP FLVWELH G+A HF +DKTI LV DRFYWPSLKQD
Sbjct: 1049 DFLLRDGYLFRGTQLCIPRTSLRDFLVWELHAGGLAGHFGKDKTITLVADRFYWPSLKQD 1108
Query: 3785 VARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDIS 3898
VA AQCRTCQLAK +K NT LYT LP+PH+ + I+
Sbjct: 1109 VAHILAQCRTCQLAKARKQNTGLYTPLPIPHTPFSKIA 1146
Score = 73.6 bits (179), Expect(3) = e-151
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
PE + L EF D+ PDDLP ELPP+ DIQH IDL+P + L NL HYRMN E+ E
Sbjct: 599 PEPLHQFLNEFSDVMPDDLPNELPPMRDIQHAIDLVPGSQLPNLPHYRMNSSEHAE 654
Score = 26.9 bits (58), Expect(3) = e-151
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 1948 EFEKETKDETIIYALVTKEDSPA 2016
EFEKE+ + +++ALV KE S A
Sbjct: 571 EFEKESLETGVVFALVIKEISAA 593
>ref|XP_007207981.1| hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica]
gi|462403623|gb|EMJ09180.1| hypothetical protein
PRUPE_ppa015715mg, partial [Prunus persica]
Length = 1445
Score = 493 bits (1270), Expect(2) = e-149
Identities = 264/585 (45%), Positives = 352/585 (60%), Gaps = 10/585 (1%)
Frame = +2
Query: 2225 KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLDDILDMIAGATI 2383
KGF+R S++PC VP LLTPK D WRMC KIT+ YRFPIPRL+D+LD +AG+
Sbjct: 569 KGFIRHSLSPCAVPVLLTPKKDGSWRMCVDSRAVNKITVKYRFPIPRLEDMLDDLAGSQW 628
Query: 2384 FSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL*GL*HNS*DPV 2563
FSKI+L+ DEWKT FK DGLY
Sbjct: 629 FSKIDLRR----------DEWKTAFKTPDGLY---------------------------- 650
Query: 2564 *VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFDDIVIYSLSGT 2743
E LVMPF ++N PST M+VMT VLR +IGKFL+VYFDDI+IYS S
Sbjct: 651 -------------EWLVMPFGMSNAPSTFMRVMTHVLRPYIGKFLVVYFDDILIYSRSRE 697
Query: 2744 TPNSLETSLQCS*ERTR---SVPQEVFIHVQXXXXXXXXFPLTRSVDPEKIKAIVEWHKP 2914
++ + + + ++ + F+ + S DP K++AI++W P
Sbjct: 698 EHLQHLRTIFSTLRKEKLYANLKKCSFLQPEVLFLGFNISAAGVSTDPAKVEAIIDWPTP 757
Query: 2915 QNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNATTKAFKEIKSRITEAP 3094
+ E RSFHGL +FYR FI GF++IM+PIT C+++ F WT+A KAF +K ++T+AP
Sbjct: 758 TTLTEARSFHGLTSFYRRFIPGFSTIMAPITDCMKQGAFLWTHAAAKAFTILKQKMTQAP 817
Query: 3095 IMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYSTYDKKFYVVV*S 3274
++ L+QE H + YF++KLN+AKQ+YSTYDK+FY VV +
Sbjct: 818 VL-----------------------LNQEGHPVAYFSEKLNEAKQRYSTYDKEFYAVVQA 854
Query: 3275 LRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFVLEHNAGIENKFA 3454
LRYW++YLL +FVL+SDH+AL+YL+SQ+ ++ RH KW E+++ +TFVL H GI+NK A
Sbjct: 855 LRYWQYYLLPNEFVLYSDHQALKYLHSQRTISSRHVKWSEYLQIFTFVLRHRPGIDNKVA 914
Query: 3455 DTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIRSNREFVLKDGFCL 3634
D +SR +LH T V + I+ +Y CPDF ++ VS R +F+ +DGF
Sbjct: 915 DALSRVATILHTMTVQV-TGFDRIKTEYSSCPDFGIIFHEVSNGNRREYVDFITRDGFLF 973
Query: 3635 EVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSLKQDVARSTAQCRT 3814
IP FLVWELH G+A HF +DKTI LVEDRFYWPSLK+DVA +QCRT
Sbjct: 974 RGTQLCIPRTSLREFLVWELHGGGLAGHFGKDKTIALVEDRFYWPSLKRDVAHLISQCRT 1033
Query: 3815 CQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
CQLAK +K NT LYT LP+PH+ W+D+SMDFVLG P T R +D I
Sbjct: 1034 CQLAKARKRNTGLYTPLPIPHTPWKDLSMDFVLGLPKTSRGYDSI 1078
Score = 66.2 bits (160), Expect(2) = e-149
Identities = 28/52 (53%), Positives = 37/52 (71%)
Frame = +3
Query: 2031 EQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIE 2186
+ + +L EF D+ PDDLP +LPP +IQH IDL+P + + NL HYRMNP E
Sbjct: 504 DPIQQLLTEFSDVIPDDLPDDLPPAREIQHAIDLVPGSQIPNLPHYRMNPPE 555
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 486 bits (1252), Expect(2) = e-148
Identities = 257/600 (42%), Positives = 370/600 (61%), Gaps = 15/600 (2%)
Frame = +2
Query: 2195 IKEVNSQASKKGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLDD 2353
++E + +KGF+RES++PC VP LL PK D WRMC KIT+ YRFPIPRL+D
Sbjct: 642 LREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAINKITVKYRFPIPRLED 701
Query: 2354 ILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL* 2533
+LD+++G+ +FSKI+L+SGY QI IR GDEWKT FK DGL+
Sbjct: 702 MLDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLF------------------ 743
Query: 2534 GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFD 2713
E LVMPF L+NTPST M++M QVLR FIG F++VYFD
Sbjct: 744 -----------------------EWLVMPFGLSNTPSTFMRLMNQVLRPFIGSFVVVYFD 780
Query: 2714 DIVIYSLSGTTPNSLETSLQCS*ERTRSVPQEVFIHVQXXXXXXXXFPLTR--------S 2869
DI+IYS TT L+ + R ++F++++
Sbjct: 781 DILIYS---TTKEEHLVHLRQVLDVLRE--NKLFVNLKKCTFCTNKLLFLGFVVGEHGIQ 835
Query: 2870 VDPEKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNAT 3049
VD EKIKAI++W P+ + EVRSFHGLATFYR F++ F+SI++PIT C++K F W
Sbjct: 836 VDDEKIKAILDWPAPKTVSEVRSFHGLATFYRRFVRHFSSIVAPITECLKKGRFSWGEEQ 895
Query: 3050 TKAFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQ 3229
++F +IK ++ AP++ LP+F KVFEV CDAS V +G VLSQ+ + +F++KL+DA+Q
Sbjct: 896 ERSFADIKEKLCTAPVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDARQ 955
Query: 3230 KYSTYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEY 3409
K+STYD++FY VV +L+ W HYL+ ++FVLF+DH+AL+Y+NSQK ++ HA+WV F++++
Sbjct: 956 KWSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQKF 1015
Query: 3410 TFVLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQ 3589
+FV++H +G N+ AD +SR+ +LL T V E ++ Y DF E++ + +
Sbjct: 1016 SFVIKHTSGKTNRVADALSRRASLLITLTQEV-VGFECLKELYEGDADFGEIWTKCTNQE 1074
Query: 3590 IRSNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWP 3769
+ ++ L +G+ + IP L+ +LH G++ H RDKTI +E+RFYWP
Sbjct: 1075 PMA--DYFLNEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHLGRDKTIAGMEERFYWP 1132
Query: 3770 SLKQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
LK+DV +C TCQ +K + NT LY LPVP+ +WQD++MDFVLG P T R D +
Sbjct: 1133 QLKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGVDSV 1192
Score = 69.7 bits (169), Expect(2) = e-148
Identities = 29/53 (54%), Positives = 41/53 (77%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIE 2186
P+ V +L +F+++F ++LP ELPP+ DIQH IDL+P A+L NL HYRM+P E
Sbjct: 586 PQDVQQILSQFQELFSENLPNELPPMRDIQHRIDLVPGASLQNLPHYRMSPKE 638
>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
gi|462402874|gb|EMJ08431.1| hypothetical protein
PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 476 bits (1224), Expect(2) = e-143
Identities = 255/602 (42%), Positives = 364/602 (60%), Gaps = 17/602 (2%)
Frame = +2
Query: 2195 IKEVNSQASKKGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLDD 2353
++E + +KGF+RES++PC VP LL PK D WRMC KI + YRF IPRL+D
Sbjct: 650 LREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAVNKIKVKYRFSIPRLED 709
Query: 2354 ILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL* 2533
ILD+++G+ +FSKI+L+SGY QI IR GDEWKT FK DGL+
Sbjct: 710 ILDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLF------------------ 751
Query: 2534 GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFD 2713
E LVMPF L+N PST M++M QVLR FIG F++VYFD
Sbjct: 752 -----------------------EWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFD 788
Query: 2714 DIVIYSLSGTTPNSLETSLQCS*ERTRSVPQEVFIHVQXXXXXXXXFPLTR--------- 2866
DI+IYS TT L+ + V +E ++V L
Sbjct: 789 DILIYS---TTKEEHLVHLR----QVLDVLRENKLYVNLKKCTFCTNKLLFLGFVVGENG 841
Query: 2867 -SVDPEKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTN 3043
VD EKIKAI++W P+ + EVRSFHGLATFY F++ F+SI +PIT C++K F W
Sbjct: 842 IQVDDEKIKAILDWPAPKTVSEVRSFHGLATFYMRFVRHFSSIAAPITECLKKGRFSWGE 901
Query: 3044 ATTKAFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDA 3223
++F +IK ++ AP++ LP+F KVFEV CDAS V +G VL Q+ + +F++KL+DA
Sbjct: 902 EQERSFADIKEKLCTAPVLALPNFEKVFEVECDASGVGVGAVLLQDKRPVAFFSEKLSDA 961
Query: 3224 KQKYSTYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIK 3403
+QK+STYD++FY VV +L+ W HYL+ ++FVLF+DH+AL+Y+NSQK ++ HA+WV F++
Sbjct: 962 RQKWSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALKYINSQKNIDKMHARWVTFLQ 1021
Query: 3404 EYTFVLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSR 3583
+++FV++H +G N+ AD +SR+ +LL T V E ++ Y DF E++ +
Sbjct: 1022 KFSFVIKHTSGKTNRVADALSRRASLLITLTQEV-VGFECLKELYEGDDDFREIWTKCTN 1080
Query: 3584 NQIRSNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFY 3763
+ + ++ L +G+ + IP L+ +LH G++ H RDKTI +E+RFY
Sbjct: 1081 QEPMT--DYFLTEGYLFKGNQLCIPVSSLREKLIRDLHGGGLSGHLGRDKTIAGMEERFY 1138
Query: 3764 WPSLKQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHD 3943
WP LK+DV +C TCQ +K + NT LY LPVP+ +WQD++MDFVLG P T R+ D
Sbjct: 1139 WPQLKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGFPRTQRRVD 1198
Query: 3944 YI 3949
+
Sbjct: 1199 SV 1200
Score = 63.5 bits (153), Expect(2) = e-143
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIE 2186
P+ V +L +F+++ ++LP ELPP+ DIQH IDL+ A+L NL HYRM+P E
Sbjct: 594 PQDVQQILSQFQELLSENLPNELPPMRDIQHRIDLVHGASLPNLPHYRMSPKE 646
>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1452
Score = 456 bits (1174), Expect(2) = e-138
Identities = 248/592 (41%), Positives = 352/592 (59%), Gaps = 16/592 (2%)
Frame = +2
Query: 2222 KKGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLDDILDMIAGAT 2380
+KG VRES +PC P LL PK D WRMC KITI YRFPIPRLD++LD + G+
Sbjct: 566 EKGLVRESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSR 625
Query: 2381 IFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL*GL*HNS*DP 2560
+FSKI+LKSGY QI +R GDEWKT FK DGL+
Sbjct: 626 VFSKIDLKSGYHQIRMRDGDEWKTAFKTPDGLF--------------------------- 658
Query: 2561 V*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFDDIVIYSLSG 2740
E LVMPF L+N PST M+VM +VL+ F+ F++VYFDDI+IYS
Sbjct: 659 --------------EWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYS--- 701
Query: 2741 TTPNSLETSLQCS*ERTRSVPQE-VFIHVQXXXXXXXXFPLTRSV--------DPEKIKA 2893
++ E L+ + + +E ++I+++ + DPEKI+A
Sbjct: 702 ---HTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRA 758
Query: 2894 IVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNATTKAFKEIK 3073
I EW P +I EVRSFHGLA+FYR FI+ F+SIMSPIT ++K+ F+W+++ KAF+ +K
Sbjct: 759 ISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVK 818
Query: 3074 SRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYSTYDKK 3253
+ +TEAP++ LPDF K+F V CDAS V IG VLSQ+ I +F++KL D++++YSTYD +
Sbjct: 819 ALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLE 878
Query: 3254 FYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFVLEHNA 3433
FY +V ++R+W+HYL ++F ++SDH+ALRYL+SQKKL+ +HAKW F+ E+ F L++ +
Sbjct: 879 FYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKS 938
Query: 3434 GIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIRSNREFV 3613
G N AD +SR+ +L + V E ++ Y F ++ A + + N +
Sbjct: 939 GQSNTVADALSRRCKMLSVMSTQV-TGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYR 997
Query: 3614 LKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSLKQDVAR 3793
L + + + IP ++ ELH +G+ HF RDKT+V+V DR+YWP +++DV R
Sbjct: 998 LHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLVMVADRYYWPKMRRDVER 1057
Query: 3794 STAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
+C C K NT LY LP P + W +SMDFVLG P T + D I
Sbjct: 1058 LVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTTKGFDSI 1109
Score = 65.1 bits (157), Expect(2) = e-138
Identities = 29/56 (51%), Positives = 39/56 (69%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P ++ +LKEF ++F +DLPK LPP+ IQH IDL+P A L NL YRM P++ E
Sbjct: 501 PTEIQQLLKEFGELFNEDLPKSLPPLRSIQHAIDLVPGAALPNLPAYRMPPMQRAE 556
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 460 bits (1184), Expect(2) = e-137
Identities = 253/603 (41%), Positives = 353/603 (58%), Gaps = 10/603 (1%)
Frame = +2
Query: 2171 NEPY*VWRIKEVNSQASKKGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YR 2329
++P +++ + KGFVRES++PC VP LL PK D WRMC ITI YR
Sbjct: 612 SDPKATQELQQQIGELVSKGFVRESLSPCSVPALLVPKKDGSWRMCTDSRAINNITIKYR 671
Query: 2330 FPIPRLDDILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG* 2509
FPIPRLDDILD ++GA +FSKI+L+ GY Q+ I+ GDEWKT FK GLY
Sbjct: 672 FPIPRLDDILDELSGAQLFSKIDLRQGYHQVRIKEGDEWKTAFKTKHGLY---------- 721
Query: 2510 LTPREPL*GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIG 2689
E LVMPF L+N PST M++MT+VLR ++G
Sbjct: 722 -------------------------------EWLVMPFGLSNAPSTFMRLMTEVLRPYLG 750
Query: 2690 KFLMVYFDDIVIYSLSGTTP-NSLETSLQCS*ERTRSVPQEVFIHVQXXXXXXXXFPLTR 2866
+F++VYFDDI++YS S L+ + E E +Q R
Sbjct: 751 RFVVVYFDDILVYSPSKEEHLKHLQVLFETLREHKLYGKLEKCSFMQNEVQFLGFIISDR 810
Query: 2867 S--VDPEKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWT 3040
VD EK+KAI W P+NI +VRSFHGLA+FYR FIK F+++M+PIT C++K EFKW
Sbjct: 811 GILVDQEKVKAIKSWPIPKNITDVRSFHGLASFYRRFIKDFSTLMAPITECMKKGEFKWG 870
Query: 3041 NATTKAFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLND 3220
+ +F IK ++ E+PI+ LP+F K+FEV CDAS + IG VL QE+ I YF++KL+
Sbjct: 871 DKAESSFNIIKEKLCESPILTLPNFNKLFEVECDASGIGIGAVLVQEHKPIAYFSEKLSG 930
Query: 3221 AKQKYSTYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFI 3400
AK YSTYDK+FY +V +L +W HYL + FVL SDH+AL+Y+N Q KLN RHAKWVEF+
Sbjct: 931 AKLNYSTYDKEFYAIVRALNHWSHYLKPRPFVLHSDHEALKYINGQHKLNHRHAKWVEFL 990
Query: 3401 KEYTFVLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVS 3580
+ + F ++ G +N AD +SR+ +L + V E+++ Y PDF+ + +
Sbjct: 991 QSFNFSSKYIEGKDNIVADALSRRFIMLSFMEQRV-LGFEYMKELYVEDPDFKGEWELLQ 1049
Query: 3581 RNQIRSNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRF 3760
QI+ ++++++GF +P PY L+ E+H +G+A HF KT +++++F
Sbjct: 1050 SGQIKLKSKYLVQNGFLFFGNKLCVPRGPYRNLLIREVHSNGLAGHFGIQKTYDILQEQF 1109
Query: 3761 YWPSLKQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKH 3940
YWP + DV +C CQ +K T YT LPVP+ W+DISMDF++ P T R
Sbjct: 1110 YWPKMLGDVQDVIKRCAPCQQSK-SYFQTGPYTPLPVPNQPWEDISMDFIVALPRTQRGK 1168
Query: 3941 DYI 3949
D I
Sbjct: 1169 DSI 1171
Score = 58.5 bits (140), Expect(2) = e-137
Identities = 24/51 (47%), Positives = 37/51 (72%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNP 2180
P++V +L+ + D+FP++LP LPP+ I+H+ID IP ATL N + YR +P
Sbjct: 564 PKEVQELLQSYEDVFPNELPSGLPPLRGIEHQIDFIPGATLPNKAAYRSDP 614
>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 457 bits (1176), Expect(2) = e-136
Identities = 252/597 (42%), Positives = 346/597 (57%), Gaps = 13/597 (2%)
Frame = +2
Query: 2198 KEVNSQASK---KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRL 2347
KE+ Q + KGFVRES++PC VP LL PK D WRMC IT+ YRFPIPRL
Sbjct: 630 KELQHQIEELMAKGFVRESLSPCAVPALLVPKKDGTWRMCTDSRAINNITVKYRFPIPRL 689
Query: 2348 DDILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREP 2527
DD+LD ++GA+IFSKI+L+ GY Q+ IR GDEWKT FK GLY
Sbjct: 690 DDMLDELSGASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHGLY---------------- 733
Query: 2528 L*GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVY 2707
E LVMPF L+N PST M++MT+VLR +GKF +VY
Sbjct: 734 -------------------------EWLVMPFGLSNAPSTFMRLMTEVLRPCLGKFAVVY 768
Query: 2708 FDDIVIYSLS-GTTPNSLETSLQCS*ERTRSVPQE--VFIHVQXXXXXXXXFPLTRSVDP 2878
FDDI++YS + G LE + E+ E F+ + SVD
Sbjct: 769 FDDILVYSKTKGEHLKHLEVVFKILREQKLYGKLEKCTFMVEEVAFLGYLISGRGISVDQ 828
Query: 2879 EKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNATTKA 3058
E I A+ W P + EVRSFHGLA+FYR FIK F+++++PIT C+RK EF+WT ++
Sbjct: 829 ENIAAMQSWPTPTTVTEVRSFHGLASFYRRFIKNFSTVVAPITECMRKGEFQWTEQAQQS 888
Query: 3059 FKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYS 3238
F++IK + PI+ LPDF ++FEV CDAS V IG VL Q + YF++KLN AK KYS
Sbjct: 889 FEKIKQLMCNTPILKLPDFDQLFEVECDASGVGIGAVLIQSQKPVAYFSEKLNGAKLKYS 948
Query: 3239 TYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFV 3418
TYDK+FY ++ +L +W HYL + FVL SDH+AL+Y+N Q KLN RHAKWVEF++ +TF
Sbjct: 949 TYDKEFYAIIRALMHWNHYLKPKPFVLHSDHEALKYINGQHKLNFRHAKWVEFLQSFTFS 1008
Query: 3419 LEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIRS 3598
++ G +N AD +SR+ +LL + V E+++ Y PDF E + + +
Sbjct: 1009 SKYKEGKKNVVADALSRRHSLLSVMSNRV-LGFEFMKELYKEDPDFSEEWITQTEGHKNQ 1067
Query: 3599 NREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSLK 3778
+++L++GF + +P Y L+ E+H G+ HF KT+ +++D+FYWP +
Sbjct: 1068 GSKYLLQEGFLFQGNKLCVPRGSYRDLLIREVHSGGMGGHFGVQKTLEILQDQFYWPRMM 1127
Query: 3779 QDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
DV +C CQL+K YT LPVP W+D+SMDF++ P T R D +
Sbjct: 1128 GDVQIILRRCSKCQLSK-SSFQPGPYTPLPVPSKPWEDLSMDFIVALPRTQRGKDSV 1183
Score = 58.2 bits (139), Expect(2) = e-136
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNP 2180
P V P+++ F+++FPD+LP LPP+ I+H IDL+P + L N YR +P
Sbjct: 576 PTAVAPLIQRFQEVFPDELPSGLPPLRGIEHHIDLVPGSVLPNKPAYRCDP 626
>ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
gi|462417202|gb|EMJ21939.1| hypothetical protein
PRUPE_ppa023598mg [Prunus persica]
Length = 1457
Score = 447 bits (1150), Expect(2) = e-134
Identities = 246/600 (41%), Positives = 354/600 (59%), Gaps = 15/600 (2%)
Frame = +2
Query: 2195 IKEVNSQASKKGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLDD 2353
++E + +KGF+RES++PC VP LL PK D WRMC KIT+ RFPIPRL+D
Sbjct: 632 LREQIEELLQKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAINKITVKSRFPIPRLED 691
Query: 2354 ILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL* 2533
+LD+++G+ +FSKI+L+SGY QI IR GDEWKT FK DGL+
Sbjct: 692 MLDVLSGSRVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLF------------------ 733
Query: 2534 GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFD 2713
E LVMPF L+N PST M++M QVLR FIG F++VYFD
Sbjct: 734 -----------------------EWLVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFD 770
Query: 2714 DIVIYSLSGTTPNSLETSLQCS*ERTRSVPQEVFIHVQXXXXXXXXFPLTR--------S 2869
DI+IYS TT L+ + R +++++++
Sbjct: 771 DILIYS---TTKEEHLVHLRQVLDVLRE--NKLYMNLKKCTFCTNKLLFLGFVVGENGIQ 825
Query: 2870 VDPEKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNAT 3049
VD EKIKAI++W P+ + EVRSFHGLATFYR F++ F+SI +PIT C++K F W +
Sbjct: 826 VDDEKIKAILDWPTPKIVSEVRSFHGLATFYRRFVRHFSSITAPITECLKKGRFSWGDEQ 885
Query: 3050 TKAFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQ 3229
++F +IK ++ AP++ LP+F KVFEV CDAS V +G VLSQ+ + +F++KL+DA Q
Sbjct: 886 ERSFADIKEKLCTAPVLALPNFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDACQ 945
Query: 3230 KYSTYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEY 3409
K+STYD++FY VV +L+ W HYL+ ++FVLF+DH+ALR WV F++++
Sbjct: 946 KWSTYDQEFYAVVRALKQWEHYLIQKEFVLFTDHQALR--------------WVTFLQKF 991
Query: 3410 TFVLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQ 3589
+FV+ H +G N+ D +SR+ +LL T V E ++ Y DF E++ + +
Sbjct: 992 SFVIRHTSGKTNRVVDALSRRASLLVTQTQEV-VGFECLKELYEGDDDFREIWTKCTNQE 1050
Query: 3590 IRSNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWP 3769
+ ++ L +G+ + IP L+ +LH G++ H RDKTI +++RFYWP
Sbjct: 1051 PMA--DYFLNEGYLFKGNQLCIPVSSLREKLIQDLHGGGLSGHLGRDKTIAGMKERFYWP 1108
Query: 3770 SLKQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
LK+DV +C TCQ +K + NT LY LPVP+ +WQD++MDFVLG P T R D +
Sbjct: 1109 QLKRDVGTIVRKCYTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGMDSV 1168
Score = 62.8 bits (151), Expect(2) = e-134
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIE 2186
P+ V +L +F+++ + LP ELP + DIQH IDL+P A L NL HYRM+P E
Sbjct: 576 PQDVQKILSQFQELLSEKLPNELPSMRDIQHRIDLVPGANLPNLPHYRMSPKE 628
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 441 bits (1135), Expect(2) = e-132
Identities = 253/601 (42%), Positives = 339/601 (56%), Gaps = 17/601 (2%)
Frame = +2
Query: 2198 KEVNSQASK---KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRL 2347
KE+ Q KG+VRES++PC VP +L PK D WRMC IT+ YR PIPRL
Sbjct: 735 KEIQRQVQALLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRL 794
Query: 2348 DDILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREP 2527
DD+LD ++G+ IFSKI+L+SG+ QI +++GDEWKT FK GLY
Sbjct: 795 DDMLDELSGSMIFSKIDLRSGFHQIRMKIGDEWKTAFKTKFGLY---------------- 838
Query: 2528 L*GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVY 2707
E LVMPF LTN PST M++M VLRAFIGKF++VY
Sbjct: 839 -------------------------EWLVMPFGLTNAPSTFMRLMNHVLRAFIGKFVVVY 873
Query: 2708 FDDIVIYSLSGTTPNSLETSLQCS*ERTR------SVPQEVFIHVQXXXXXXXXFPLTRS 2869
FDDI+IYS T +Q + R ++ + F Q L
Sbjct: 874 FDDILIYS---KTLEEHVAHIQQVLDVLRKEQLYANLEKCTFCTDQVVFLGFVVSGLGIQ 930
Query: 2870 VDPEKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKE-EFKWTNA 3046
VD K+KAI +W P+N+ +V+SF GLA FYR F++GF++I +P+ +K F+W
Sbjct: 931 VDESKVKAIKDWPTPENVSQVKSFRGLAGFYRRFVRGFSTIAAPLNELTKKGVAFQWGEP 990
Query: 3047 TTKAFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAK 3226
KAF+E+K R++E P++ LPDF K FEV CDAS + IGGVL Q + YF++KL A+
Sbjct: 991 QEKAFQELKKRLSEGPLLVLPDFTKTFEVECDASGIGIGGVLMQNGQPVAYFSEKLGGAQ 1050
Query: 3227 QKYSTYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKE 3406
YS YDK+ Y +V +L W+HYL ++FV+ SDH+AL+YL Q KLN RHAKWVEFI+
Sbjct: 1051 LNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIET 1110
Query: 3407 YTFVLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRN 3586
+ +V+++ G EN AD +SRK LL+ V +E I+ Y DF E YA +
Sbjct: 1111 FPYVVKYKKGKENIVADALSRKNVLLNQLEVKV-TGIESIKELYSADLDFSEPYAKCTAG 1169
Query: 3587 QIRSNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYW 3766
+ ++ + DGF +P L+ E H G+ HF KT ++ D FYW
Sbjct: 1170 --KGWEKYHIHDGFLFRANKLCVPHCSVRLLLLQETHAGGLMGHFGWRKTYDMLADHFYW 1227
Query: 3767 PSLKQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDY 3946
P +++DV R +C TC AK K LYT LPVP + W+DISMDFVLG P T R D
Sbjct: 1228 PKMRRDVQRLVQRCVTCHKAKSKLNPHGLYTPLPVPSAPWEDISMDFVLGLPRTKRGRDS 1287
Query: 3947 I 3949
I
Sbjct: 1288 I 1288
Score = 61.6 bits (148), Expect(2) = e-132
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P V VL+E+ D+FP++ P LPP+ I+H+IDLIP ATL N YR NP E E
Sbjct: 681 PSVVARVLQEYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETKE 736
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 431 bits (1109), Expect(2) = e-129
Identities = 246/598 (41%), Positives = 335/598 (56%), Gaps = 14/598 (2%)
Frame = +2
Query: 2198 KEVNSQASK---KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRL 2347
KE+ Q + KG+VRES++PC VP +L PK D WRMC ITI YR PIPRL
Sbjct: 732 KEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRL 791
Query: 2348 DDILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREP 2527
DD+LD ++G+ +FSK++L+SGY QI ++LGDEWKT FK GLY
Sbjct: 792 DDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLY---------------- 835
Query: 2528 L*GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVY 2707
E LVMPF LTN PST M++M +VLR FIGKF++VY
Sbjct: 836 -------------------------EWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVY 870
Query: 2708 FDDIVIYSLS-GTTPNSLETSLQCS*ERTR--SVPQEVFIHVQXXXXXXXXFPLTRSVDP 2878
FDDI+IYS S G N L + ++ + F + P VD
Sbjct: 871 FDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQ 930
Query: 2879 EKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKE-EFKWTNATTK 3055
K++AI W P+ + +VRSF GLA FYR F++ F++I +P+ +K F W +
Sbjct: 931 AKVEAIQSWPTPKTVSQVRSFLGLAGFYRRFVQDFSTIAAPLNVLTKKGVPFTWGTSQEN 990
Query: 3056 AFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKY 3235
AF +K ++T AP++ LPDF K FE+ CDAS + +GGVL QE + YF++KL+ Y
Sbjct: 991 AFHMLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNY 1050
Query: 3236 STYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTF 3415
STYDK+ Y +V +L W+HYL ++FV+ SDH++L+++ SQ KLN RHAKWVEFI+ + +
Sbjct: 1051 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPY 1110
Query: 3416 VLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIR 3595
V++H G EN AD +SR+ LL + LE I+ Y DF ++ R
Sbjct: 1111 VIKHKKGKENIIADALSRRYTLLTQLDYKIFG-LETIKDQYAHDADFNDVLLHCKDG--R 1167
Query: 3596 SNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSL 3775
+ +FV+ DGF IPA L+ E H G+ HF KT ++ F+WP +
Sbjct: 1168 TWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQM 1227
Query: 3776 KQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
++DV R A+C TCQ AK + LY LPVP W+DISMDFVLG P T R D I
Sbjct: 1228 RRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSI 1285
Score = 60.5 bits (145), Expect(2) = e-129
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P V +L+E+ D+FP ++P LPP+ I+H+IDLIP A+L N + YR NP E E
Sbjct: 678 PPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKE 733
Score = 220 bits (561), Expect = 4e-54
Identities = 152/499 (30%), Positives = 244/499 (48%), Gaps = 48/499 (9%)
Frame = +2
Query: 2597 LYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFDDIVIYSLSGTTPNSLETSLQC 2776
LYE VM F LTN P+ M +M +V ++ KF++V+ DDI++YS S E Q
Sbjct: 1626 LYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILVYSQS-------EEDHQ- 1677
Query: 2777 S*ERTRSVPQEVFIHVQXXXXXXXXFPLTR-------------SVDPEKIKAIVEWHKPQ 2917
R V ++ H F L+ +VDPE + A+ +W +P+
Sbjct: 1678 --HHLRLVLGKLREHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPK 1735
Query: 2918 NIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEE-FKWTNATTKAFKEIKSRITEAP 3094
+ ++RSF GLA +YR FI+ F+ I P+T ++KEE F W+ KAF+ +K ++ +P
Sbjct: 1736 TVTQIRSFLGLAGYYRRFIENFSKIARPMTQLLKKEEKFVWSPQCEKAFQTLKEKLVSSP 1795
Query: 3095 IMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYSTYDKKFYVVV*S 3274
++ LPD K F V CDAS +G VL QE H + Y +++L + Y T+D + VV +
Sbjct: 1796 VLILPDTRKDFMVYCDASPQGLGCVLMQEGHVVAYASRQLWPHEGNYPTHDLELAAVVHA 1855
Query: 3275 LRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFVLEHNAGIENKFA 3454
L+ WRHYL+ + +++DHK+L+Y+ +Q LN R +W+E IK+Y + ++ G N A
Sbjct: 1856 LKIWRHYLIGNRCEIYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHPGKANVVA 1915
Query: 3455 DTMSRK-------------------------------VALLHYCTP*V*K*LEWIRGDYP 3541
D +SRK +A L P + L+ IR
Sbjct: 1916 DALSRKSHCNTLGVRGIPPELNQQMEALNLSIVSRGFLATLE-AKPTL---LDQIREAQK 1971
Query: 3542 MCPDFEELYASVSRNQIRSNREFVLKDGFCLEVVNR-AIP-AHPYETFLVWELHISGVAS 3715
PD L ++ + + F+ + L NR +P + ++ E H S +
Sbjct: 1972 NDPDMRGLLKNMKQGKAAG---FIEDEHGTLWNRNRVCVPDVRELKQLILQEAHESPYSI 2028
Query: 3716 HFDRDKTIVLVEDRFYWPSLKQDVARSTAQCRTCQLAK*K-K*NTSLYTALPVPHSMWQD 3892
H K + ++++++W S+K+++A A C CQ K + + L L VP W +
Sbjct: 2029 HPGSTKMYLDLKEKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKWDE 2088
Query: 3893 ISMDFVLGPPNTIRKHDYI 3949
I MDF+ G P T +D I
Sbjct: 2089 IGMDFITGLPKTQGGYDSI 2107
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 431 bits (1108), Expect(2) = e-129
Identities = 243/598 (40%), Positives = 338/598 (56%), Gaps = 14/598 (2%)
Frame = +2
Query: 2198 KEVNSQASK---KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRL 2347
KE+ Q + KG+VRES++PC VP +L PK D WRMC ITI YR PIPRL
Sbjct: 735 KEIQRQVQELLDKGYVRESLSPCAVPVILVPKKDGTWRMCVDCRAINNITIRYRHPIPRL 794
Query: 2348 DDILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREP 2527
DD+LD ++GA +FSK++L+SGY QI ++LGDEWKT FK GLY
Sbjct: 795 DDMLDELSGAIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLY---------------- 838
Query: 2528 L*GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVY 2707
E LVMPF LTN PST M++M +VLRAFIGKF++VY
Sbjct: 839 -------------------------EWLVMPFGLTNAPSTFMRLMNEVLRAFIGKFVVVY 873
Query: 2708 FDDIVIYSLSGTTPNSLETSLQCS*ERTR---SVPQEVFIHVQXXXXXXXXFPLTRSVDP 2878
FDDI+IYS S ++ + R ++ + F + P VD
Sbjct: 874 FDDILIYSKSMDEHVDHMRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQ 933
Query: 2879 EKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKE-EFKWTNATTK 3055
K++AI W P+ I +VRSF GLA FYR F+K F++I +P+ +K F W
Sbjct: 934 AKVEAIHGWPMPKTITQVRSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEH 993
Query: 3056 AFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKY 3235
AF +K ++T AP++ LPDF K FE+ CDAS + +GGVL QE + YF++KL+ + Y
Sbjct: 994 AFNVLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNY 1053
Query: 3236 STYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTF 3415
STYDK+ Y +V +L W+HYL ++FV+ SDH++L+++ SQ KLN RHAKWVEFI+ + +
Sbjct: 1054 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPY 1113
Query: 3416 VLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIR 3595
V++H G EN AD +SR+ LL+ + LE I+ Y DF+++ +
Sbjct: 1114 VIKHKKGKENIIADALSRRYTLLNQLDYKIFG-LETIKDQYVHDADFKDVLLHCKDG--K 1170
Query: 3596 SNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSL 3775
++++ DGF IPA L+ E H G+ HF KT ++ F+WP +
Sbjct: 1171 GWNKYIVSDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTEDILAGHFFWPKM 1230
Query: 3776 KQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
++DV R A+C TCQ AK + LY LPVP + W+DISMDFVLG P T + D +
Sbjct: 1231 RRDVVRLVARCTTCQKAKSRLNPHGLYLPLPVPSAPWEDISMDFVLGLPRTRKGRDSV 1288
Score = 60.8 bits (146), Expect(2) = e-129
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P + +L+E+ D+FP ++P+ LPPI I+H+IDLIP A+L N + YR NP E E
Sbjct: 681 PPVITNILQEYSDVFPSEIPEGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKE 736
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 430 bits (1106), Expect(2) = e-128
Identities = 246/598 (41%), Positives = 340/598 (56%), Gaps = 14/598 (2%)
Frame = +2
Query: 2198 KEVNSQASK---KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRL 2347
KE+ Q + KG+VRES++PC +P LL PK D WRMC ITI YR PIPRL
Sbjct: 760 KEIQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMCVDCRAINNITIRYRHPIPRL 819
Query: 2348 DDILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREP 2527
DD+LD ++G+ +FSKI+L+SGY QI ++LGDEWKT FK GLY
Sbjct: 820 DDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLY---------------- 863
Query: 2528 L*GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVY 2707
E LVMPF LTN PST +++M +VLRAFIG+F++VY
Sbjct: 864 -------------------------EWLVMPFGLTNAPSTFIRLMNEVLRAFIGRFVVVY 898
Query: 2708 FDDIVIYSLSGTTPNSLETSLQCS*ERTR---SVPQEVFIHVQXXXXXXXXFPLTRSVDP 2878
FDDI+IYS S + ++ + R ++ + F + P VD
Sbjct: 899 FDDILIYSRSIEDHHGHLRAVFDALRDERLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQ 958
Query: 2879 EKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKE-EFKWTNATTK 3055
K++AI W P I +VRSF GLA FYR F+K F++I +P+ ++ F W A
Sbjct: 959 AKVEAIHSWPVPTTITQVRSFLGLAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAAAQRN 1018
Query: 3056 AFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKY 3235
AF +K ++T AP++ LPDF K FE+ CDAS + +GGVL QE I YF++KL+ Y
Sbjct: 1019 AFDTLKDKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKPIEYFSEKLSGPSLNY 1078
Query: 3236 STYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTF 3415
STYDK+ + +V +L W+HYL ++FV+ SDH++L+++ SQ KLN RHAKWVEFI+ + +
Sbjct: 1079 STYDKELFALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQAKLNRRHAKWVEFIESFPY 1138
Query: 3416 VLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIR 3595
V++H G EN AD +SR+ A+L + LE I+ Y DF+++ + R
Sbjct: 1139 VIKHKKGKENVIADALSRRYAMLSQLDFKIFG-LETIKEQYAHDDDFKDVLLNCKEG--R 1195
Query: 3596 SNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSL 3775
+ +FVL +GF IPA L+ E H G+ HF KT ++ D F+WP +
Sbjct: 1196 TWNKFVLTNGFVFRANKLCIPASSVRMLLLQEAHGGGLMGHFGVKKTEDILADHFFWPKM 1255
Query: 3776 KQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
++DV R A+C TCQ AK + LY LPVP W+DISMDFVLG P T + D I
Sbjct: 1256 RRDVERFVARCTTCQKAKLRLNPHGLYMPLPVPSVPWEDISMDFVLGLPRTKKGRDSI 1313
Score = 59.7 bits (143), Expect(2) = e-128
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P V +L+E+ DIFP ++P LPPI I+H+IDLIP A+L N + YR NP E E
Sbjct: 706 PPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKE 761
>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
aegilopoides]
Length = 1704
Score = 425 bits (1093), Expect(2) = e-128
Identities = 247/608 (40%), Positives = 341/608 (56%), Gaps = 24/608 (3%)
Frame = +2
Query: 2198 KEVNSQASK---KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRL 2347
KE+ Q + KG++RES++PC VP +L PK D RMC ITI YR PIPRL
Sbjct: 776 KEIMRQVQELLDKGYIRESLSPCAVPIILVPKKDGTSRMCVDCRGINNITIRYRHPIPRL 835
Query: 2348 DDILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREP 2527
DD+LD ++G+TIFSK++L+SGY QI ++LGDEWKTTFK GLY
Sbjct: 836 DDMLDELSGSTIFSKVDLRSGYHQIRMKLGDEWKTTFKTKFGLY---------------- 879
Query: 2528 L*GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVY 2707
E LVMPF LTN PST M++M +VLRAFIG+F++VY
Sbjct: 880 -------------------------EWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVY 914
Query: 2708 FDDIVIYSLSGTTPNSLETSLQCS*ERTRSV-------------PQEVFIHVQXXXXXXX 2848
FDDI+IYS SLE L E R+V + F +
Sbjct: 915 FDDILIYS------KSLEEHL----EHLRAVFIALRDARLFGNLGKCTFCTDRVSFLGYV 964
Query: 2849 XFPLTRSVDPEKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKE- 3025
P VD KI+AI W P+ + +VRSF GLA FYR F++ F++I +P+ +K+
Sbjct: 965 VTPQGIEVDKAKIEAIESWPHPKTVTQVRSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDV 1024
Query: 3026 EFKWTNATTKAFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFN 3205
F W A +AF +K ++T AP++ LP+F K FE+ CDAS + +GGVL Q+ + YF+
Sbjct: 1025 PFVWGTAQEEAFTVLKDKLTYAPLLQLPNFNKTFELECDASGIGLGGVLLQDGKPVAYFS 1084
Query: 3206 KKLNDAKQKYSTYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAK 3385
+K + YSTYDK+ Y +V +L W+HYL ++FV+ SDH++L+++ SQ KLN RHAK
Sbjct: 1085 EKFSGPSLNYSTYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIKSQAKLNRRHAK 1144
Query: 3386 WVEFIKEYTFVLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEEL 3565
WVEFI+ + +V++H G EN AD +SR+ +L + LE I+ Y +F+++
Sbjct: 1145 WVEFIETFPYVIKHKKGKENVIADALSRRYTMLSQLDFKIFG-LETIKDQYVHDAEFKDV 1203
Query: 3566 YASVSRNQIRSNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVL 3745
+ R+ +FVL DGF IPA L+ E H G+ HF KT +
Sbjct: 1204 LQNCKEG--RTWNKFVLNDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGVKKTEDI 1261
Query: 3746 VEDRFYWPSLKQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPN 3925
+ F+WP +++DV R A+C TCQ AK + LY LPVP W+DISMDFVLG P
Sbjct: 1262 LATHFFWPKMRRDVERFVARCTTCQRAKSRLNPHGLYMPLPVPSVPWEDISMDFVLGLPR 1321
Query: 3926 TIRKHDYI 3949
T + D I
Sbjct: 1322 TKKGRDSI 1329
Score = 63.2 bits (152), Expect(2) = e-128
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P V +L+EF D+FP D+P LPPI I+H+IDLIP A+L N + YR NP E E
Sbjct: 722 PPAVTNILQEFTDVFPQDVPPGLPPIRGIEHQIDLIPGASLPNRAPYRTNPEETKE 777
>gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1619
Score = 425 bits (1093), Expect(2) = e-127
Identities = 244/598 (40%), Positives = 333/598 (55%), Gaps = 14/598 (2%)
Frame = +2
Query: 2198 KEVNSQASK---KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRL 2347
KE+ Q + KG+VRES++PC VP +L PK D WRMC ITI YR PIPRL
Sbjct: 711 KEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRL 770
Query: 2348 DDILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREP 2527
DD+LD ++G+ +FSK+ L+SGY QI ++LGDEWKT FK GLY
Sbjct: 771 DDMLDELSGSIVFSKVELRSGYHQIHMKLGDEWKTAFKTKFGLY---------------- 814
Query: 2528 L*GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVY 2707
E LVMPF LTN PST M++M +VLR FIGKF++VY
Sbjct: 815 -------------------------EWLVMPFGLTNAPSTFMRLMNEVLRPFIGKFVVVY 849
Query: 2708 FDDIVIYSLS-GTTPNSLETSLQCS*ERTR--SVPQEVFIHVQXXXXXXXXFPLTRSVDP 2878
FDDI+IYS S G N L + ++ + F + P VD
Sbjct: 850 FDDILIYSKSMGEHFNHLRAVFNALRDARLFGNLEKCTFCTDRVSFLGYVVTPQGIEVDQ 909
Query: 2879 EKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKE-EFKWTNATTK 3055
K++AI W P+ + +VRSF GLA FY F++ F++I +P+ +K F W +
Sbjct: 910 AKVEAIQSWPTPKTVSQVRSFLGLAGFYCRFVQDFSTIAAPLNALTKKGVPFTWGTSQEN 969
Query: 3056 AFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKY 3235
AF +K ++T AP++ LPDF K FE+ CDAS + +GGVL QE + YF++KL+ Y
Sbjct: 970 AFHMLKHKLTHAPLLQLPDFNKTFELECDASGIGLGGVLLQEGKLVAYFSEKLSGPVLNY 1029
Query: 3236 STYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTF 3415
STYDK+ Y +V +L W+HYL ++FV+ SDH++L+++ SQ KLN RHAKWVEFI+ + +
Sbjct: 1030 STYDKELYALVRTLETWQHYLWPKEFVIHSDHESLKHIRSQGKLNRRHAKWVEFIESFPY 1089
Query: 3416 VLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIR 3595
V++H G EN A+ +SR+ LL + LE I+ Y DF ++ R
Sbjct: 1090 VIKHKKGKENIIANALSRRYTLLTQLDYKIFG-LETIKDQYAHDADFNDVLLHCKDG--R 1146
Query: 3596 SNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSL 3775
+ +FV+ DGF IPA L+ E H G+ HF KT ++ F+WP +
Sbjct: 1147 TWNKFVINDGFVFRANKLCIPASSVRLLLLQEAHGGGLMGHFGAKKTHDILASHFFWPQM 1206
Query: 3776 KQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
++DV R A+C TCQ AK + LY LPVP W+DISMDFVLG P T R D I
Sbjct: 1207 RRDVGRFVARCATCQKAKSRLHPHGLYMPLPVPTVPWEDISMDFVLGLPRTKRGRDSI 1264
Score = 60.5 bits (145), Expect(2) = e-127
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P V +L+E+ D+FP ++P LPP+ I+H+IDLIP A+L N + YR NP E E
Sbjct: 657 PPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKE 712
>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
Length = 1887
Score = 428 bits (1101), Expect(2) = e-127
Identities = 247/608 (40%), Positives = 343/608 (56%), Gaps = 24/608 (3%)
Frame = +2
Query: 2198 KEVNSQASK---KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRL 2347
KE+ Q ++ +G +RESM+PC VP LL PK D WRMC IT+ YR PIPRL
Sbjct: 924 KELEKQVTELMERGHIRESMSPCAVPVLLVPKKDGSWRMCVDCRAINNITVKYRHPIPRL 983
Query: 2348 DDILDMIAGATIFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREP 2527
DD+LD + G++IFSK++LKSGY QI ++ GDEWKT FK GL
Sbjct: 984 DDMLDELHGSSIFSKVDLKSGYHQIRMKEGDEWKTAFKTIQGL----------------- 1026
Query: 2528 L*GL*HNS*DPV*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVY 2707
YE LVMPF LTN PST M++M VLRAFIG+F++VY
Sbjct: 1027 ------------------------YEWLVMPFGLTNAPSTFMRLMNHVLRAFIGRFVIVY 1062
Query: 2708 FDDIVIYSLSGTTPNSLETSLQCS*ERTRSV-----PQEVFIHVQXXXXXXXXFPLTR-- 2866
FDDI++YS SLE + E + V ++++ +++
Sbjct: 1063 FDDILVYS------KSLEEHV----EHLKMVLEVLRKEKLYANLKKCTFGTDNLVFLGFV 1112
Query: 2867 ------SVDPEKIKAIVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEE 3028
VD EK+KAI EW P+++ EVRSFHGLA FYR F+K F+++ +P+T I+K
Sbjct: 1113 VSTDGVKVDEEKVKAIREWPSPKSVGEVRSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNV 1172
Query: 3029 -FKWTNATTKAFKEIKSRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFN 3205
FKW A AF+ +K ++T AP++ LPDFLK FE+ CDAS V IG VL Q+ I YF+
Sbjct: 1173 GFKWEQAQEDAFQALKEKLTHAPVLSLPDFLKTFEIECDASGVGIGVVLMQDKKPIAYFS 1232
Query: 3206 KKLNDAKQKYSTYDKKFYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAK 3385
+KL A Y TYDK+ Y +V +L+ +HYL ++FV+ +DH++L++L Q+KLN RHA+
Sbjct: 1233 EKLGGATLNYPTYDKELYALVRALQTGQHYLWPKEFVIHTDHESLKHLKGQQKLNKRHAR 1292
Query: 3386 WVEFIKEYTFVLEHNAGIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEEL 3565
WVEFI+ + +V+++ G +N AD +SR+ LL + E I+ Y DFE++
Sbjct: 1293 WVEFIETFPYVIKYKKGKDNVVADALSRRYVLLSSLDAKL-LGFEHIKSLYANDSDFEKI 1351
Query: 3566 YASVSRNQIRSNREFVLKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVL 3745
Y+S + ++ DGF IP + E H G+ HF KTI +
Sbjct: 1352 YSSCEKFAF---GKYYRHDGFLFYDNRLCIPNSSLRELFIREAHGGGLMGHFGVSKTIKV 1408
Query: 3746 VEDRFYWPSLKQDVARSTAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPN 3925
++D F+WP +K+DV R +C TC+ AK K LYT LP+P W DISMDFV+G P
Sbjct: 1409 MQDHFHWPHMKRDVERICERCPTCKQAKAKSQPHGLYTPLPIPSHPWNDISMDFVVGLPR 1468
Query: 3926 TIRKHDYI 3949
T D I
Sbjct: 1469 TRTGKDSI 1476
Score = 57.0 bits (136), Expect(2) = e-127
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P ++ +L+++ D+FP++ P LPPI I+H+ID +P A+L N YR NP+E E
Sbjct: 870 PSKIKFLLQDYTDVFPEENPVGLPPIRGIEHQIDFVPGASLPNRPAYRTNPVETKE 925
>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
Length = 1292
Score = 414 bits (1064), Expect(2) = e-126
Identities = 256/583 (43%), Positives = 314/583 (53%), Gaps = 8/583 (1%)
Frame = +2
Query: 2225 KGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLDDILDMIAGATI 2383
KGF+RES++P VP LLTPK D WRMC KITI YRFPIPRLDD+LDM+ + I
Sbjct: 567 KGFIRESLSPYGVPALLTPKKDGSWRMCVDSRAMNKITIKYRFPIPRLDDMLDMMVRSVI 626
Query: 2384 FSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL*GL*HNS*DPV 2563
FSKI+L+SGY QI IR GDEWKT+FK DGLY
Sbjct: 627 FSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLY---------------------------- 658
Query: 2564 *VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFDDIVIYSLSGT 2743
E LVM F LTN PST M++MTQVL+ FIG+F++VYFDDI+IYS S
Sbjct: 659 -------------EWLVMLFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSRSCE 705
Query: 2744 TPNSLETSLQCS*ERTRSVPQEVFIHVQXXXXXXXXFPLTRSVDPEKIKAIVEWHKPQNI 2923
+ C+ + + F + PEKIKAIV+W P NI
Sbjct: 706 DHEEHLKQVMCTLKAEK-------------------FYINLKKYPEKIKAIVDWPVPTNI 746
Query: 2924 HEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNATTKAFKEIKSRITEAPIMH 3103
HEVRSFHG+ATFYR FI+ F+SIM+ IT C++ F WT A KAF+EIKS++ PI+
Sbjct: 747 HEVRSFHGMATFYRRFIRNFSSIMALITECMKLGLFIWTKAANKAFEEIKSKMVNPPILR 806
Query: 3104 LPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYSTYDKKFYVVV*SLRY 3283
LPDF KV EVACDAS V IG VLSQE H + +F++KLN AK+KYSTYD +FY VV
Sbjct: 807 LPDFEKVCEVACDASHVGIGVVLSQEGHLVAFFSEKLNGAKKKYSTYDLEFYAVV----- 861
Query: 3284 WRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFVLEHNAGIENKFADTM 3463
A IENK AD +
Sbjct: 862 ------------------------------------------------QARIENKVADAL 873
Query: 3464 SRKVALL-HYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIRSNREFVLKDGFCLEV 3640
SRK LL + T + E ++ Y DF ++Y+S + S + D LE
Sbjct: 874 SRKALLLVNMSTTTI--GFEELKHCYDNDADFGDVYSS-----LLSGSKVTCIDFXILER 926
Query: 3641 VNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSLKQDVARSTAQCRTCQ 3820
+ ++WELH G+ HF RDKTI LVEDRF+WPSLK+DV + CR CQ
Sbjct: 927 TSLC-------DHVIWELHGGGMGGHFGRDKTIALVEDRFFWPSLKKDVWKVIKXCRACQ 979
Query: 3821 LAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
+ K K NT LYT LPVP W+D+SMDFVLG P T R D I
Sbjct: 980 VGKGSKQNTGLYTPLPVPSKPWEDLSMDFVLGLPRTQRGFDSI 1022
Score = 68.2 bits (165), Expect(2) = e-126
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +3
Query: 2028 PEQVGPVLKEFRDIFPDDLPKELPPIHDIQHEIDLIPRATLLNLSHYRMNPIEYGE 2195
P V +L +F D +P +LP +LPP+ D+QH IDLIP A+L NL YRMNP E+ E
Sbjct: 501 PANVRKILDDFSDFWPTELPNQLPPMRDVQHAIDLIPGASLPNLPAYRMNPTEHAE 556
>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 786
Score = 455 bits (1170), Expect = e-124
Identities = 247/592 (41%), Positives = 351/592 (59%), Gaps = 16/592 (2%)
Frame = +2
Query: 2222 KKGFVRESMNPCVVPCLLTPKNDSYWRMC-------KITI*YRFPIPRLDDILDMIAGAT 2380
+KG VRES +PC P LL PK D WRMC KITI YRFPIPRLD++LD + G+
Sbjct: 18 EKGLVRESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSR 77
Query: 2381 IFSKINLKSGYQQICIRLGDEWKTTFKMNDGLYDSS*SCPLG*LTPREPL*GL*HNS*DP 2560
+FSKI+LKSGY QI +R GDEWKT FK DGL+
Sbjct: 78 VFSKIDLKSGYHQIRMRDGDEWKTAFKTPDGLF--------------------------- 110
Query: 2561 V*VSS*WFTLTILYELLVMPFRLTNTPSTLMKVMTQVLRAFIGKFLMVYFDDIVIYSLSG 2740
E LVMPF L+N PST M+VM +VL+ F+ F++VYFDDI+IYS
Sbjct: 111 --------------EWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVVVYFDDILIYS--- 153
Query: 2741 TTPNSLETSLQCS*ERTRSVPQE-VFIHVQXXXXXXXXFPLTRSV--------DPEKIKA 2893
++ E L+ + + +E ++I+++ + DPEKI+A
Sbjct: 154 ---HTKEKHLKHLRQVLEVLQKEQLYINLKKCSFMQPEVVFLGFIVSAEGLKPDPEKIRA 210
Query: 2894 IVEWHKPQNIHEVRSFHGLATFYR*FIKGFNSIMSPIT*CIRKEEFKWTNATTKAFKEIK 3073
I EW P +I EVRSFHGLA+FYR FI+ F+SIMSPIT ++K+ F+W+++ KAF+ +K
Sbjct: 211 ISEWPAPTSIKEVRSFHGLASFYRRFIRNFSSIMSPITESLKKDGFEWSHSAQKAFERVK 270
Query: 3074 SRITEAPIMHLPDFLKVFEVACDASAVSIGGVLSQENHSITYFNKKLNDAKQKYSTYDKK 3253
+ +TEAP++ LPDF K+F V CDAS V IG VLSQ+ I +F++KL D++++YSTYD +
Sbjct: 271 ALMTEAPVLALPDFEKLFVVECDASYVGIGAVLSQDGRPIEFFSEKLTDSRRRYSTYDLE 330
Query: 3254 FYVVV*SLRYWRHYLLSQKFVLFSDHKALRYLNSQKKLNPRHAKWVEFIKEYTFVLEHNA 3433
FY +V ++R+W+HYL ++F ++SDH+ALRYL+SQKKL+ +HAKW F+ E+ F L++ +
Sbjct: 331 FYALVRAIRHWQHYLAYREFAVYSDHQALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKS 390
Query: 3434 GIENKFADTMSRKVALLHYCTP*V*K*LEWIRGDYPMCPDFEELYASVSRNQIRSNREFV 3613
G N AD +SR+ +L + V E ++ Y F ++ A + + N +
Sbjct: 391 GQSNTVADALSRRCKMLSVMSTQV-TGFEELKNQYSSDSYFSKIIADLQGSLQAENLPYR 449
Query: 3614 LKDGFCLEVVNRAIPAHPYETFLVWELHISGVASHFDRDKTIVLVEDRFYWPSLKQDVAR 3793
L + + + IP ++ ELH +G+ HF RDKT+ +V DR+YWP +++DV R
Sbjct: 450 LHEDYLFKGNQLCIPEGSLREQIIRELHGNGLGGHFGRDKTLAMVADRYYWPKMRRDVER 509
Query: 3794 STAQCRTCQLAK*KK*NTSLYTALPVPHSMWQDISMDFVLGPPNTIRKHDYI 3949
+C C K NT LY LP P + W +SMDFVLG P T + D I
Sbjct: 510 LVKRCPACLFGKGSAQNTGLYVPLPEPDAPWIHLSMDFVLGLPKTAKGFDSI 561