BLASTX nr result

ID: Akebia25_contig00023656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00023656
         (375 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]      57   3e-06
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    56   4e-06
gb|ABB00038.1| reverse transcriptase family member [Glycine max]       55   8e-06

>gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]
          Length = 714

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
 Frame = +1

Query: 91  LLCDQCFPIKLKGNSF*EGSKTNYT*A-----EY*AIKKQDIHKLSVTKMRMLRWXXXXX 255
           +LCD   PIKLKG  +    +T    A     E  AIK+Q I K+SV +MRMLRW     
Sbjct: 455 VLCDSKMPIKLKGKFY----RTVICPAMLYGSECWAIKRQHISKMSVAEMRMLRWMSGHT 510

Query: 256 XXXXXXXXXHS*NL*IAPICDKIGESRLTCFGHAQQRPV 372
                        + +API DK+GE  L  + H Q+RP+
Sbjct: 511 RMDRIRNEVIRSKVGVAPIEDKVGEGHLRWYEHVQRRPL 549


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
 Frame = +1

Query: 91  LLCDQCFPIKLKGNSF*EGSKTNYT*A-----EY*AIKKQDIHKLSVTKMRMLRWXXXXX 255
           +LCD+C P+KLKG  +    +T    A     E  A+K Q +HK+ V +MRMLRW     
Sbjct: 57  VLCDRCMPLKLKGKFY----RTTIRPAMLYGTECWAVKYQHVHKMGVAEMRMLRWMCGHT 112

Query: 256 XXXXXXXXXHS*NL*IAPICDKIGESRLTCFGHAQQRP 369
                        + +A I   + E+RL  FGH Q+RP
Sbjct: 113 RKDKIRNEDIRGKVGVAEIEGNMRENRLRWFGHVQRRP 150


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
 Frame = +1

Query: 91  LLCDQCFPIKLKGNSF*EGSK-TNYT*AEY*AIKKQDIHKLSVTKMRMLRWXXXXXXXXX 267
           +LCD   PIKLKG  +    + T     E  A+K Q  +K+ V +MRMLRW         
Sbjct: 223 VLCDAKVPIKLKGKFYRTAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDK 282

Query: 268 XXXXXHS*NL*IAPICDKIGESRLTCFGHAQQRPV 372
                    + +API +K+ E+RL  FGH ++RPV
Sbjct: 283 IRNEAIRERVGVAPIVEKMVENRLRWFGHVERRPV 317


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