BLASTX nr result

ID: Akebia25_contig00022709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00022709
         (385 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                57   3e-08
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]      54   2e-07
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    56   2e-07
gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]      50   2e-06
gb|EXC32766.1| hypothetical protein L484_019880 [Morus notabilis]      57   4e-06
gb|EXB68727.1| DNA repair protein rhp54 [Morus notabilis]              50   4e-06
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                55   5e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 57.0 bits (136), Expect(2) = 3e-08
 Identities = 32/70 (45%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
 Frame = +3

Query: 102  RILRWMSGNTIKNTIRNERGHEKLRLAPAGNKSRES*LRWFDHVQ*KSTMVPVRR---NV 272
            R+LRWM G+T K+ IRNE    K+ +A    K RE+ LRWF HVQ + T  P+RR     
Sbjct: 877  RMLRWMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRRCDYGT 936

Query: 273  TVQGSNSTSR 302
             VQG     R
Sbjct: 937  EVQGRRGRGR 946



 Score = 26.6 bits (57), Expect(2) = 3e-08
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 16  SAVSLAMLCGVACWSIKKQRV 78
           +A+  AML G  CW++K Q V
Sbjct: 848 TAIRPAMLYGTECWAVKHQHV 868


>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
          Length = 1413

 Score = 53.5 bits (127), Expect(2) = 2e-07
 Identities = 27/54 (50%), Positives = 34/54 (62%)
 Frame = +3

Query: 102  RILRWMSGNTIKNTIRNERGHEKLRLAPAGNKSRES*LRWFDHVQ*KSTMVPVR 263
            R+LRWMSG T  + I+NE    K+ +AP  +K RE  LRWF HVQ +    PVR
Sbjct: 990  RMLRWMSGQTRMDRIKNEVIRSKVGVAPIEDKVREGRLRWFGHVQRRPLEAPVR 1043



 Score = 26.9 bits (58), Expect(2) = 2e-07
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 31   AMLCGVACWSIKKQRVS 81
            AML G  CW+IK+Q +S
Sbjct: 966  AMLYGSKCWAIKRQHIS 982


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 55.8 bits (133), Expect(2) = 2e-07
 Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
 Frame = +3

Query: 102 RILRWMSGNTIKNTIRNERGHEKLRLAPAGNKSRES*LRWFDHVQ*KSTMVPVRR---NV 272
           R+LRWM G+T K+ IRNE    K+ +A      RE+ LRWF HVQ + T  P+RR     
Sbjct: 103 RMLRWMCGHTRKDKIRNEDIRGKVGVAEIEGNMRENRLRWFGHVQRRPTYAPIRRCDYET 162

Query: 273 TVQGSNSTSR 302
            VQG     R
Sbjct: 163 EVQGRRGRGR 172



 Score = 24.6 bits (52), Expect(2) = 2e-07
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 31  AMLCGVACWSIKKQRV 78
           AML G  CW++K Q V
Sbjct: 79  AMLYGTECWAVKYQHV 94


>gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]
          Length = 714

 Score = 50.4 bits (119), Expect(2) = 2e-06
 Identities = 25/53 (47%), Positives = 34/53 (64%)
 Frame = +3

Query: 102 RILRWMSGNTIKNTIRNERGHEKLRLAPAGNKSRES*LRWFDHVQ*KSTMVPV 260
           R+LRWMSG+T  + IRNE    K+ +AP  +K  E  LRW++HVQ +    PV
Sbjct: 501 RMLRWMSGHTRMDRIRNEVIRSKVGVAPIEDKVGEGHLRWYEHVQRRPLEAPV 553



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 31  AMLCGVACWSIKKQRVS 81
           AML G  CW+IK+Q +S
Sbjct: 477 AMLYGSECWAIKRQHIS 493


>gb|EXC32766.1| hypothetical protein L484_019880 [Morus notabilis]
          Length = 178

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = +3

Query: 102 RILRWMSGNTIKNTIRNERGHEKLRLAPAGNKSRES*LRWFDHVQ*KSTMVPVRRNVTVQ 281
           R+LRWMSG+T  + IRNE    K+ +AP  +K RE+ LRW+ HVQ +S   PVR   ++Q
Sbjct: 7   RMLRWMSGHTRMDRIRNEVIRSKVGVAPIEDKVRENHLRWYGHVQRRSLDAPVRAWESIQ 66


>gb|EXB68727.1| DNA repair protein rhp54 [Morus notabilis]
          Length = 1311

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 28/54 (51%), Positives = 34/54 (62%)
 Frame = +3

Query: 102 RILRWMSGNTIKNTIRNERGHEKLRLAPAGNKSRES*LRWFDHVQ*KSTMVPVR 263
           R+LR MSG+T  + IRNE    KL +AP  +K RE  LRWF HVQ +    PVR
Sbjct: 344 RMLRRMSGHTRMDCIRNEVMGSKLGVAPIKDKVREGCLRWFGHVQRRPLEAPVR 397



 Score = 25.8 bits (55), Expect(2) = 4e-06
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 31  AMLCGVACWSIKKQRVS 81
           AML G  CW IK+Q +S
Sbjct: 320 AMLYGSECWVIKRQHIS 336


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 55.1 bits (131), Expect(2) = 5e-06
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = +3

Query: 102 RILRWMSGNTIKNTIRNERGHEKLRLAPAGNKSRES*LRWFDHVQ*KSTMVPVRR 266
           R+LRWM G+T  + IRNE   EK+ +A   +K RE+ LRWF HV+ +S   PVRR
Sbjct: 585 RMLRWMCGHTRSDKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRR 639



 Score = 20.8 bits (42), Expect(2) = 5e-06
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 320 VMRADMNKQELTEYIALDIIEW 385
           V+R D+    +TE + LD  EW
Sbjct: 662 VIRQDLAMLHITEDMTLDRKEW 683


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