BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00022157
         (1826 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   652   0.0  
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   630   e-178
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   628   e-177
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...   627   e-177
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   625   e-176
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   624   e-176
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   624   e-176
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca...   618   e-174
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   618   e-174
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca...   617   e-174
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas...   617   e-174
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   617   e-174
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   614   e-173
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   614   e-173
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK...   614   e-173
ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mi...   612   e-172
emb|CBI18897.3| unnamed protein product [Vitis vinifera]              611   e-172
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   610   e-172
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   610   e-172
ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mi...   603   e-169

>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
            vinifera]
          Length = 503

 Score =  652 bits (1682), Expect = 0.0
 Identities = 332/474 (70%), Positives = 382/474 (80%), Gaps = 20/474 (4%)
 Frame = +1

Query: 241  QNPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDF 420
            + PRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAVPE DRG PKRFD+
Sbjct: 32   KKPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDW 91

Query: 421  ARSARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDR 600
            ARSARTDKGVSAVGQVVSGRFYIDPPGL++RLNSNLP QIRIFGFKR TASFNAKKFCDR
Sbjct: 92   ARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDR 151

Query: 601  RRYVYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNI- 777
            RRYVYLIPVFALDP+SHPDRESVLAS+GSEN+LVKCLECSERGRKV G+MG+R+ ES + 
Sbjct: 152  RRYVYLIPVFALDPSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRSFESKVS 211

Query: 778  ------VEN------GVSIVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQ----SEI 909
                  VE       G +I+   E + ES                I +    Q    SE 
Sbjct: 212  VDDREDVEGESKNIVGAAILKS-EAKEESMASSDNRHDGNSISQPIKEGRCFQDNETSES 270

Query: 910  VVEPRVSLEEEKFDENLVQCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTHNFHNFT 1080
              + R S + E    +  Q + GE K   GSGFCYG+KE+ERFNRIL HYVGTHNFHNFT
Sbjct: 271  TPDSRASAQNEPGVSHSEQSDKGENKLEKGSGFCYGDKERERFNRILGHYVGTHNFHNFT 330

Query: 1081 TRTKAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCA 1260
            TR KAEDPSA+R+I+SF+ N IVTVEG++FVKCEVVGQSFMLHQIRK+IGLAV++MRN A
Sbjct: 331  TRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNVA 390

Query: 1261 PESLIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKM 1440
            PESL++TAL +DVN+NVPTAPEVGLYLDECFF+SYN+KW+D+HEE+SMK YAEEAE+FKM
Sbjct: 391  PESLLETALLKDVNINVPTAPEVGLYLDECFFSSYNKKWRDSHEEVSMKAYAEEAEEFKM 450

Query: 1441 KQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEANEVHSNEENAQFDTVAE 1602
            K +YSHIA+TEHKEG VALWLHSLNHRNYPDL  +  N   S+ +N + +T+A+
Sbjct: 451  KHVYSHIAATEHKEGVVALWLHSLNHRNYPDL-CIGDNGAASDGKNGEEETMAD 503


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus]
          Length = 519

 Score =  630 bits (1625), Expect = e-178
 Identities = 322/464 (69%), Positives = 370/464 (79%), Gaps = 17/464 (3%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIE DLEEALYL+GAVPE DRG  KR+D+ARS
Sbjct: 51   RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARS 110

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPG +DRLNSNL  QIRIFG+KR TASFNAKKFCDRRRY
Sbjct: 111  ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRY 170

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRN-------SE 768
            VYLIPVFALDPN H DRESV ASLGS+N+LVKCLECSERGRKV G++G+RN       +E
Sbjct: 171  VYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITE 230

Query: 769  SNIVENGVSIVSQIEGETESGFXXXXXXXXXXXXXXIL-DSTVSQSEIVVEPRVSLEEEK 945
            S+I  N V+ +   + +                   +L ++T ++  +  E     E  +
Sbjct: 231  SDISSNTVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSE 290

Query: 946  F-----DENLV---QCNNGEGKGSG-FCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAE 1098
                  D  +V   +  NG+ K SG F YGE+EK RFNRIL HYVGTHNFHNFTTRTKAE
Sbjct: 291  MSGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAE 350

Query: 1099 DPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPESLID 1278
            DP+A+R+I+SF+A+ IV VEG++FVKCEVVGQSFMLHQIRK++GLAV++MRNCAPESLI+
Sbjct: 351  DPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIE 410

Query: 1279 TALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSH 1458
             ALQ+DVN+NVPTAPEVGLYLDEC FTSYNQKWKDTHEE+SMK Y E AEDFKMKQIYSH
Sbjct: 411  KALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSH 470

Query: 1459 IASTEHKEGAVALWLHSLNHRNYPDLRAVEANEVHSNEENAQFD 1590
            IASTEHK+GAVALWLHSLNHRNYPDLR ++  EV    +NA  D
Sbjct: 471  IASTEHKDGAVALWLHSLNHRNYPDLRVID--EVAKIAKNASLD 512


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  628 bits (1620), Expect = e-177
 Identities = 321/464 (69%), Positives = 369/464 (79%), Gaps = 17/464 (3%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+A FFAYCGVGYQGMQKNPGAKTIE DLEEALYL+GAVPE DRG  KR+D+ARS
Sbjct: 51   RYKRRKVAXFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARS 110

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPG +DRLNSNL  QIRIFG+KR TASFNAKKFCDRRRY
Sbjct: 111  ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRY 170

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRN-------SE 768
            VYLIPVFALDPN H DRESV ASLGS+N+LVKCLECSERGRKV G++G+RN       +E
Sbjct: 171  VYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITE 230

Query: 769  SNIVENGVSIVSQIEGETESGFXXXXXXXXXXXXXXIL-DSTVSQSEIVVEPRVSLEEEK 945
            S+I  N V+ +   + +                   +L ++T ++  +  E     E  +
Sbjct: 231  SDISSNTVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSE 290

Query: 946  F-----DENLV---QCNNGEGKGSG-FCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAE 1098
                  D  +V   +  NG+ K SG F YGE+EK RFNRIL HYVGTHNFHNFTTRTKAE
Sbjct: 291  MSGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAE 350

Query: 1099 DPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPESLID 1278
            DP+A+R+I+SF+A+ IV VEG++FVKCEVVGQSFMLHQIRK++GLAV++MRNCAPESLI+
Sbjct: 351  DPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIE 410

Query: 1279 TALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSH 1458
             ALQ+DVN+NVPTAPEVGLYLDEC FTSYNQKWKDTHEE+SMK Y E AEDFKMKQIYSH
Sbjct: 411  KALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSH 470

Query: 1459 IASTEHKEGAVALWLHSLNHRNYPDLRAVEANEVHSNEENAQFD 1590
            IASTEHK+GAVALWLHSLNHRNYPDLR ++  EV    +NA  D
Sbjct: 471  IASTEHKDGAVALWLHSLNHRNYPDLRVID--EVAKIAKNASLD 512


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  627 bits (1617), Expect = e-177
 Identities = 320/468 (68%), Positives = 369/468 (78%), Gaps = 17/468 (3%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIE DLEEALYL+GAVPE DRG  KR+D+ARS
Sbjct: 51   RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARS 110

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPG +DRLNSNL  QIRIFG+KR TASFNAKKFCDRRRY
Sbjct: 111  ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRY 170

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRN-------SE 768
            VYLIPVFALDPN H DRESV ASLGS+N+LVKCLECSERGRKV G+MG+RN       +E
Sbjct: 171  VYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTAITE 230

Query: 769  SNIVENGVSIVSQIEGETESGFXXXXXXXXXXXXXXIL-DSTVSQSEIVVEPRVSLEEEK 945
            S+I  N V+ +   + +                   +L ++T ++  +  E     E  +
Sbjct: 231  SDISSNIVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELTVASEGIAKSESSE 290

Query: 946  F-----DENLV---QCNNGEGKGSG-FCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAE 1098
                  D  +V   +  NG+ K SG F YGE+EK RFNRIL HYVGTHNFHNFTTRTKAE
Sbjct: 291  MSGLGNDSEIVVSKESVNGKEKPSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAE 350

Query: 1099 DPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPESLID 1278
            DP+A+R+I+SF+A+  V VEG++FVKCEVVGQSFMLHQIRK++GLAV++MRNCAPESLI+
Sbjct: 351  DPAARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIE 410

Query: 1279 TALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSH 1458
             ALQ+DVN+NVPTAPEVGLYLDEC FTSYNQKWKDTHEE+SMK Y E AEDFKMKQIYSH
Sbjct: 411  KALQKDVNINVPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEVAEDFKMKQIYSH 470

Query: 1459 IASTEHKEGAVALWLHSLNHRNYPDLRAVEANEVHSNEENAQFDTVAE 1602
            IASTEHK+GAVALWLHSLNHRNYPDLR ++     +   +   +T AE
Sbjct: 471  IASTEHKDGAVALWLHSLNHRNYPDLRVIDEVAKIAKNTSVDMETQAE 518


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            gi|550339814|gb|EEE94755.2| hypothetical protein
            POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  625 bits (1612), Expect = e-176
 Identities = 320/469 (68%), Positives = 367/469 (78%), Gaps = 18/469 (3%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRKIAIF  YCGVGYQGMQKNPGAKTIEGDLEEAL+ +GAVPE DRG PKR+D+ARS
Sbjct: 50   RYKRRKIAIFLTYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDWARS 109

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPGL++RL+SNL  QIRIFG+KR T SFNAKKFCDRRRY
Sbjct: 110  ARTDKGVSAVGQVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDRRRY 169

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIVENG 789
            VYLIPVFAL+P SH DRESVLASLGS ++LVKCL+CSERGRKV G +G+R+ ES    + 
Sbjct: 170  VYLIPVFALNPCSHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRSFESKSDVSP 229

Query: 790  VSIVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQSEIVVEPRVSLEEEKF------- 948
              I S  +                         T  +SEI  E  +S   E         
Sbjct: 230  TEIWSNDK------------------------DTTLKSEIKEEVSISSNSEDANANPEIK 265

Query: 949  DENLVQCNNGEGK----------GSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAE 1098
            DE +V   NG+ K          GSGFCYGEKEKERFNRILN+Y+G+HNFHNFTTRTKAE
Sbjct: 266  DEIMVSIENGDDKNTKSEEEAIKGSGFCYGEKEKERFNRILNYYLGSHNFHNFTTRTKAE 325

Query: 1099 DPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPESLID 1278
            DPSA+RYI+SF+A   V VEG++FVKCEVVGQSFMLHQIRK+IG+AV++MRNCA ESLI 
Sbjct: 326  DPSAQRYIISFDAKTTVAVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESLIQ 385

Query: 1279 TALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSH 1458
            TALQ++VN+NVPTAPEVGLYLDECFFTSYNQKWKD+HEE+SMKDY EEAE+FKMK IYSH
Sbjct: 386  TALQKNVNINVPTAPEVGLYLDECFFTSYNQKWKDSHEELSMKDYEEEAEEFKMKHIYSH 445

Query: 1459 IASTEHKEGAVALWLHSLNHRNYPDLRAVE-ANEVHSNEENAQFDTVAE 1602
            IA+TEHKEG+VALWLHSLNHRNYPDLRA +  + + S + N +  T+ E
Sbjct: 446  IATTEHKEGSVALWLHSLNHRNYPDLRACDNGDNITSEDNNGRESTMVE 494


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  624 bits (1609), Expect = e-176
 Identities = 318/461 (68%), Positives = 362/461 (78%), Gaps = 20/461 (4%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY+SGAVPE DRG PKR+D+ARS
Sbjct: 16   RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARS 75

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPGL+DRLNSNLP QIRIFG+KR TASFNAKKFCDRRRY
Sbjct: 76   ARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRY 135

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIVENG 789
            VYLIPVFALDP+ H DRE+V+ASLGS N+LVKCLECSERGRKV G++G  N + N+    
Sbjct: 136  VYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVG--NRKQNLELEA 193

Query: 790  VSIVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQS-------EIVVEPRVSLEEEKF 948
            V + + I    +SG                L+             +  +E  + ++EE  
Sbjct: 194  VDVEAGISSNRDSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGT 253

Query: 949  DENLVQCN----------NGEGK---GSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRT 1089
              N    N          NGE K   GS FCYGEKE+ERFN+IL  +VGTHNFHNFTTRT
Sbjct: 254  PLNGESVNNSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRT 313

Query: 1090 KAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPES 1269
            KAEDP+A+RYI+SF AN  + VEG++FVKCEVVGQSFMLHQIRK+IGLAV++MRNCAPES
Sbjct: 314  KAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPES 373

Query: 1270 LIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQI 1449
            LID ALQQDVN+NVPTAPEVGLYLDECFFTSYNQKWKD HEE+SMK Y +EA++FKMK I
Sbjct: 374  LIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYI 432

Query: 1450 YSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEANEVHSNE 1572
            YSHIASTE KEG VALWLHSLNHRNYPDLR +    + +N+
Sbjct: 433  YSHIASTEQKEGTVALWLHSLNHRNYPDLRVINEEAIPNNK 473


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 548

 Score =  624 bits (1609), Expect = e-176
 Identities = 318/461 (68%), Positives = 362/461 (78%), Gaps = 20/461 (4%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY+SGAVPE DRG PKR+D+ARS
Sbjct: 46   RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQDRGVPKRYDWARS 105

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPGL+DRLNSNLP QIRIFG+KR TASFNAKKFCDRRRY
Sbjct: 106  ARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRY 165

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIVENG 789
            VYLIPVFALDP+ H DRE+V+ASLGS N+LVKCLECSERGRKV G++G  N + N+    
Sbjct: 166  VYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVG--NRKQNLELEA 223

Query: 790  VSIVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQS-------EIVVEPRVSLEEEKF 948
            V + + I    +SG                L+             +  +E  + ++EE  
Sbjct: 224  VDVEAGISSNRDSGVTEDVEVSLSKGDDNHLNEESGNDNKGGMNCKTGLETVIPVQEEGT 283

Query: 949  DENLVQCN----------NGEGK---GSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRT 1089
              N    N          NGE K   GS FCYGEKE+ERFN+IL  +VGTHNFHNFTTRT
Sbjct: 284  PLNGESVNNSDILEEEKVNGEDKPTNGSRFCYGEKERERFNKILKCFVGTHNFHNFTTRT 343

Query: 1090 KAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPES 1269
            KAEDP+A+RYI+SF AN  + VEG++FVKCEVVGQSFMLHQIRK+IGLAV++MRNCAPES
Sbjct: 344  KAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPES 403

Query: 1270 LIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQI 1449
            LID ALQQDVN+NVPTAPEVGLYLDECFFTSYNQKWKD HEE+SMK Y +EA++FKMK I
Sbjct: 404  LIDEALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKD-HEELSMKAYEKEADEFKMKYI 462

Query: 1450 YSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEANEVHSNE 1572
            YSHIASTE KEG VALWLHSLNHRNYPDLR +    + +N+
Sbjct: 463  YSHIASTEQKEGTVALWLHSLNHRNYPDLRVINEEAIPNNK 503


>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
            gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
            [Medicago truncatula]
          Length = 530

 Score =  618 bits (1594), Expect = e-174
 Identities = 320/483 (66%), Positives = 366/483 (75%), Gaps = 32/483 (6%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEG+LEEALY+SGAVPE DRG  KR+D+ARS
Sbjct: 50   RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARS 109

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFGFKR TASF+AKKFCDRRRY
Sbjct: 110  ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRY 169

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNI---- 777
            VYLIPVFALDP  H DRE+VLASLGSEN+LVKCL CSERGRKV GV+G  NS+ N+    
Sbjct: 170  VYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVG--NSKRNLELEA 227

Query: 778  --VENGVS-----IVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQSEIVVEPRVSLE 936
              VENG S     + S +  + E                   +  VS  E+  +  VS E
Sbjct: 228  VDVENGSSNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDE 287

Query: 937  EEK-------------FDENLVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNF 1077
            +E               +E  V   +    GSGFCYGEKE+ERFN IL  YVGTHNFHNF
Sbjct: 288  DEVAPINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNF 347

Query: 1078 TTRTKAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNC 1257
            TTR K EDPSAKR+I+SF+A+  V VEGM+FVKCE+VGQSFMLHQIRK++GLAV++MRNC
Sbjct: 348  TTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNC 407

Query: 1258 APESLIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFK 1437
            APESLI+ ALQ+DV++ VPTAPEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFK
Sbjct: 408  APESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFK 467

Query: 1438 MKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEAN--------EVHSNEENAQFDT 1593
            M+ IY HIASTE+KEG V LWLHSLNHRNYPDLR ++          EV  N++  + + 
Sbjct: 468  MQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGVTNDKKVEVDMNDKKTEIEV 527

Query: 1594 VAE 1602
            V E
Sbjct: 528  VTE 530


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
            Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  618 bits (1593), Expect = e-174
 Identities = 316/432 (73%), Positives = 354/432 (81%), Gaps = 2/432 (0%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAVPE DRG PKR+D+ARS
Sbjct: 54   RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGNPKRYDWARS 113

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPGL++RLN  LP QIRIFG+KR TASFN+KKFCDRRRY
Sbjct: 114  ARTDKGVSAVGQVVSGRFYIDPPGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDRRRY 173

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSE--SNIVE 783
            VYLIPVFALDP+ H DRESVLASLGS N+LVKCLECSERGRKV GVMG+R+ E  S IV 
Sbjct: 174  VYLIPVFALDPSCHRDRESVLASLGSGNELVKCLECSERGRKVAGVMGKRSFEAKSTIVH 233

Query: 784  NGVSIVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQSEIVVEPRVSLEEEKFDENLV 963
            + VS         ESG               + DS+V Q+E     +V++E+   +E   
Sbjct: 234  SDVS-----SNNGESG-NVIKEHNLTSELEEVTDSSV-QNEFTEVDKVNVEKIPLEERR- 285

Query: 964  QCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANV 1143
                       FCYGE+EK  FNRIL HYVG+HNFHNFTTRTKAEDPSA+RYI+SF AN 
Sbjct: 286  -----------FCYGEEEKGLFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHANT 334

Query: 1144 IVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPESLIDTALQQDVNMNVPTAP 1323
            +V VEG+DFVKCEVVGQSFMLHQIRK+IG+AV+VMRNCAPESLI+TAL++DV++NVPTAP
Sbjct: 335  VVNVEGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRNCAPESLIETALRKDVSINVPTAP 394

Query: 1324 EVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWL 1503
            EVGLYLDEC F SYNQKWKD+HEE+SMK Y EEAE+FKMK IYSHIASTE +EG VALWL
Sbjct: 395  EVGLYLDECLFASYNQKWKDSHEELSMKAYEEEAEEFKMKFIYSHIASTEREEGVVALWL 454

Query: 1504 HSLNHRNYPDLR 1539
            HSLNHRNYPDLR
Sbjct: 455  HSLNHRNYPDLR 466


>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
            gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
            [Medicago truncatula] gi|388510220|gb|AFK43176.1| unknown
            [Medicago truncatula]
          Length = 530

 Score =  617 bits (1591), Expect = e-174
 Identities = 319/483 (66%), Positives = 366/483 (75%), Gaps = 32/483 (6%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEG+LEEALY+SGAVPE DRG  KR+D+ARS
Sbjct: 50   RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARS 109

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFGFKR TASF+AKKFCDRRRY
Sbjct: 110  ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRY 169

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNI---- 777
            VYLIPVFALDP  H DRE+VLASLGSEN+LVKCL CSERGRKV GV+G  NS+ N+    
Sbjct: 170  VYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVG--NSKRNLELEA 227

Query: 778  --VENGVS-----IVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQSEIVVEPRVSLE 936
              VENG S     + S +  + E                   +  VS  E+  +  VS +
Sbjct: 228  VDVENGSSNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQ 287

Query: 937  EEK-------------FDENLVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNF 1077
            +E               +E  V   +    GSGFCYGEKE+ERFN IL  YVGTHNFHNF
Sbjct: 288  DEVAPINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNF 347

Query: 1078 TTRTKAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNC 1257
            TTR K EDPSAKR+I+SF+A+  V VEGM+FVKCE+VGQSFMLHQIRK++GLAV++MRNC
Sbjct: 348  TTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNC 407

Query: 1258 APESLIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFK 1437
            APESLI+ ALQ+DV++ VPTAPEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFK
Sbjct: 408  APESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFK 467

Query: 1438 MKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEAN--------EVHSNEENAQFDT 1593
            M+ IY HIASTE+KEG V LWLHSLNHRNYPDLR ++          EV  N++  + + 
Sbjct: 468  MQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLRILDGEGVTNDKKVEVDMNDKKTEIEV 527

Query: 1594 VAE 1602
            V E
Sbjct: 528  VTE 530


>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028255|gb|ESW26895.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  617 bits (1590), Expect = e-174
 Identities = 319/470 (67%), Positives = 365/470 (77%), Gaps = 29/470 (6%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY+SGAVPE DRG PKR+D+ARS
Sbjct: 19   RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARS 78

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPGL+DRLNSNL  QIRIFG+KR T SFNAKKFCDRRRY
Sbjct: 79   ARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRY 138

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNS----ESNI 777
            VYLIPVFALDP  H DRE+V+ASLGS N+LVKCLECSERGRKV G++G R      E+  
Sbjct: 139  VYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMD 198

Query: 778  VENGVS------IVSQIEGETESGF------XXXXXXXXXXXXXXILDSTVSQSEIVVEP 921
            VE G+S      + S + G+ E+                      ++D T  ++ I  E 
Sbjct: 199  VEAGISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGI--EK 256

Query: 922  RVSLEEEKFDENLVQCN----------NGEGK---GSGFCYGEKEKERFNRILNHYVGTH 1062
             + +++E    N    N          NGE K   GS FCYGEKE+ERFN+ILN +VGTH
Sbjct: 257  GIPVQDEVMPLNGESVNNSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTH 316

Query: 1063 NFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVS 1242
            NFHNFTTRTKAEDP+A+RYI+SF AN    VEG++FVKCEVVGQSFMLHQIRK++GLAV+
Sbjct: 317  NFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVA 376

Query: 1243 VMRNCAPESLIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEE 1422
            +MRNCAPESLI+ ALQQDVN+NVPTAPEVGLYLDECFF+SYNQKWKD+HEE+SMK Y +E
Sbjct: 377  IMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKE 436

Query: 1423 AEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEANEVHSNE 1572
            AE+FKMK IYSHI+ TE KEG VALWLHSLNHRNYPDLR V    +  N+
Sbjct: 437  AEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNK 486


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|593783723|ref|XP_007154902.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028254|gb|ESW26894.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  617 bits (1590), Expect = e-174
 Identities = 319/470 (67%), Positives = 365/470 (77%), Gaps = 29/470 (6%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALY+SGAVPE DRG PKR+D+ARS
Sbjct: 49   RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWARS 108

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPGL+DRLNSNL  QIRIFG+KR T SFNAKKFCDRRRY
Sbjct: 109  ARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRRRY 168

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNS----ESNI 777
            VYLIPVFALDP  H DRE+V+ASLGS N+LVKCLECSERGRKV G++G R      E+  
Sbjct: 169  VYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEAMD 228

Query: 778  VENGVS------IVSQIEGETESGF------XXXXXXXXXXXXXXILDSTVSQSEIVVEP 921
            VE G+S      + S + G+ E+                      ++D T  ++ I  E 
Sbjct: 229  VEAGISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGI--EK 286

Query: 922  RVSLEEEKFDENLVQCN----------NGEGK---GSGFCYGEKEKERFNRILNHYVGTH 1062
             + +++E    N    N          NGE K   GS FCYGEKE+ERFN+ILN +VGTH
Sbjct: 287  GIPVQDEVMPLNGESVNNSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTH 346

Query: 1063 NFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVS 1242
            NFHNFTTRTKAEDP+A+RYI+SF AN    VEG++FVKCEVVGQSFMLHQIRK++GLAV+
Sbjct: 347  NFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVA 406

Query: 1243 VMRNCAPESLIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEE 1422
            +MRNCAPESLI+ ALQQDVN+NVPTAPEVGLYLDECFF+SYNQKWKD+HEE+SMK Y +E
Sbjct: 407  IMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSSYNQKWKDSHEELSMKAYEKE 466

Query: 1423 AEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEANEVHSNE 1572
            AE+FKMK IYSHI+ TE KEG VALWLHSLNHRNYPDLR V    +  N+
Sbjct: 467  AEEFKMKYIYSHISFTEQKEGTVALWLHSLNHRNYPDLRVVNEEAITDNK 516


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Cicer arietinum]
          Length = 475

 Score =  614 bits (1584), Expect = e-173
 Identities = 312/459 (67%), Positives = 360/459 (78%), Gaps = 8/459 (1%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AI FAYCGVGYQGMQKNPGAKTIEG++EEALY+SGAVPE DRG  KR+D+ARS
Sbjct: 20   RYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWARS 79

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFG+KR TASF+AKKFCDRRRY
Sbjct: 80   ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRY 139

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIVENG 789
            VYLIPVFALDP  H DRE+VLASLGSEN+LVKCLECSERGRKV G++G  NS+ N+    
Sbjct: 140  VYLIPVFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVG--NSKRNLELEA 197

Query: 790  VSIVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQSEIV-----VEPRVSLEEEK--- 945
            + + +  +G+                    ++S  S   +V     V P     E     
Sbjct: 198  MDVETTDKGDDNRSNKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSENNSAV 257

Query: 946  FDENLVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYIL 1125
             +E  V   +   K S FCYGEKE+ERFN+IL  YVGTHNFHNFTTR K EDPSAKR+I+
Sbjct: 258  LEEEKVNGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFII 317

Query: 1126 SFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPESLIDTALQQDVNM 1305
            SF+A+  V +EGM+FVKCE+VGQSFMLHQIRK++GLAV++MRNCAPESLI+ ALQ DV++
Sbjct: 318  SFDASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSI 377

Query: 1306 NVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEG 1485
             VPTAPEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFKMK IYSHIASTE KEG
Sbjct: 378  TVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEG 437

Query: 1486 AVALWLHSLNHRNYPDLRAVEANEVHSNEENAQFDTVAE 1602
             V LWLHSLNHRNY DLR VE   V +NE+ ++ + VAE
Sbjct: 438  TVGLWLHSLNHRNYSDLRVVEEEGV-ANEKKSEIEVVAE 475


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Cicer arietinum]
          Length = 505

 Score =  614 bits (1584), Expect = e-173
 Identities = 312/459 (67%), Positives = 360/459 (78%), Gaps = 8/459 (1%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AI FAYCGVGYQGMQKNPGAKTIEG++EEALY+SGAVPE DRG  KR+D+ARS
Sbjct: 50   RYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWARS 109

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFG+KR TASF+AKKFCDRRRY
Sbjct: 110  ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRRRY 169

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIVENG 789
            VYLIPVFALDP  H DRE+VLASLGSEN+LVKCLECSERGRKV G++G  NS+ N+    
Sbjct: 170  VYLIPVFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVG--NSKRNLELEA 227

Query: 790  VSIVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQSEIV-----VEPRVSLEEEK--- 945
            + + +  +G+                    ++S  S   +V     V P     E     
Sbjct: 228  MDVETTDKGDDNRSNKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSENNSAV 287

Query: 946  FDENLVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYIL 1125
             +E  V   +   K S FCYGEKE+ERFN+IL  YVGTHNFHNFTTR K EDPSAKR+I+
Sbjct: 288  LEEEKVNGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAKRFII 347

Query: 1126 SFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPESLIDTALQQDVNM 1305
            SF+A+  V +EGM+FVKCE+VGQSFMLHQIRK++GLAV++MRNCAPESLI+ ALQ DV++
Sbjct: 348  SFDASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQTDVSI 407

Query: 1306 NVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEG 1485
             VPTAPEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFKMK IYSHIASTE KEG
Sbjct: 408  TVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFKMKFIYSHIASTEQKEG 467

Query: 1486 AVALWLHSLNHRNYPDLRAVEANEVHSNEENAQFDTVAE 1602
             V LWLHSLNHRNY DLR VE   V +NE+ ++ + VAE
Sbjct: 468  TVGLWLHSLNHRNYSDLRVVEEEGV-ANEKKSEIEVVAE 505


>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
            [Medicago truncatula]
          Length = 530

 Score =  614 bits (1584), Expect = e-173
 Identities = 318/483 (65%), Positives = 365/483 (75%), Gaps = 32/483 (6%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEG+LEEALY+SGAVPE DRG  KR+D+ARS
Sbjct: 50   RYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWARS 109

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQVVSGRFYIDPPG +DRLNSNLP QIRIFGFKR TASF+AKKFCDRRRY
Sbjct: 110  ARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRRRY 169

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNI---- 777
            VYLIPVFALDP  H DRE+VLASLGSEN+LVKCL CSERGRKV GV+G  NS+ N+    
Sbjct: 170  VYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVG--NSKRNLELEA 227

Query: 778  --VENGVS-----IVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQSEIVVEPRVSLE 936
              VENG S     + S +  + E                   +  VS  E+  +  VS +
Sbjct: 228  VDVENGSSNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQ 287

Query: 937  EEK-------------FDENLVQCNNGEGKGSGFCYGEKEKERFNRILNHYVGTHNFHNF 1077
            +E               +E  V   +    GSGFCYGEKE+ERFN IL  YVGTHNFHNF
Sbjct: 288  DEVAPINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNF 347

Query: 1078 TTRTKAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNC 1257
            TTR K EDPSAKR+I+SF+A+  V VEGM+FVKCE+VGQSFMLHQIRK++GLAV++MRNC
Sbjct: 348  TTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNC 407

Query: 1258 APESLIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFK 1437
            APESLI+ ALQ+DV++ VPTAPEVGLYLDECFFTSYNQKWKDTHEE+SMK Y +EAEDFK
Sbjct: 408  APESLIEKALQKDVSITVPTAPEVGLYLDECFFTSYNQKWKDTHEEVSMKAYEKEAEDFK 467

Query: 1438 MKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEAN--------EVHSNEENAQFDT 1593
            M+ IY HIASTE+KEG V LWLHSLNHRNYPDL  ++          EV  N++  + + 
Sbjct: 468  MQYIYPHIASTEYKEGTVGLWLHSLNHRNYPDLGILDGEGVTNDKKVEVDMNDKKTEIEV 527

Query: 1594 VAE 1602
            V E
Sbjct: 528  VTE 530


>ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 591

 Score =  612 bits (1579), Expect = e-172
 Identities = 313/454 (68%), Positives = 356/454 (78%), Gaps = 3/454 (0%)
 Frame = +1

Query: 241  QNPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDF 420
            Q  R KRRK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPE DR  PKR+D+
Sbjct: 44   QKQRLKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEQDRSNPKRYDW 103

Query: 421  ARSARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDR 600
            ARSARTDKGVSAVGQVVSGRFY+DPPG +DRLNS+L  QIRIFG+KR TASFNAKKFCDR
Sbjct: 104  ARSARTDKGVSAVGQVVSGRFYVDPPGFVDRLNSHLSPQIRIFGYKRVTASFNAKKFCDR 163

Query: 601  RRYVYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIV 780
            RRYVYLIPVFALDP++H DRESV ASLGS+ + VKCLECS+RGRKV G+MG+R  +   +
Sbjct: 164  RRYVYLIPVFALDPSAHRDRESVKASLGSDEEFVKCLECSDRGRKVGGLMGKRTYQ---L 220

Query: 781  ENGVSIVSQIEGETESGFXXXXXXXXXXXXXXILDSTVSQSEIVVEPRVSLEEEKFDENL 960
              G S  S+   E  +                 +D+ +   + VV     +   +     
Sbjct: 221  RGGNSYNSESVTEISTNDDMK------------IDNDIEGEDNVVVGNADMNSAE----- 263

Query: 961  VQCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSF 1131
             + N GE K   GSGFCYGEKEKERFNRIL+ Y GTHNFHNFTTRTKAEDP+A RYI+SF
Sbjct: 264  -EVNGGEKKAVEGSGFCYGEKEKERFNRILSCYQGTHNFHNFTTRTKAEDPAAIRYIISF 322

Query: 1132 EANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVSVMRNCAPESLIDTALQQDVNMNV 1311
             AN  VTVEG++FVKCEVVGQSFMLHQIRKLIGLAV++MRNCAPESL++ ALQ+DVN+NV
Sbjct: 323  SANATVTVEGIEFVKCEVVGQSFMLHQIRKLIGLAVAIMRNCAPESLLERALQKDVNVNV 382

Query: 1312 PTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAV 1491
            PTAPEVGLYLDECFF+SYNQKW DTHEE+SMK Y  EAE FKMK IY+HI +TEHKEG V
Sbjct: 383  PTAPEVGLYLDECFFSSYNQKWGDTHEEVSMKGYEAEAEAFKMKHIYTHIGATEHKEGVV 442

Query: 1492 ALWLHSLNHRNYPDLRAVEANEVHSNEENAQFDT 1593
             LWLHSLNHRNYPDL A E N   SN + A+  +
Sbjct: 443  GLWLHSLNHRNYPDLGA-ENNGDTSNGKTAEISS 475


>emb|CBI18897.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  611 bits (1575), Expect = e-172
 Identities = 309/439 (70%), Positives = 361/439 (82%), Gaps = 8/439 (1%)
 Frame = +1

Query: 310  MQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARSARTDKGVSAVGQVVSGRFYI 489
            MQKNPGAKTIEGDLEEAL+ SGAVPE DRG PKRFD+ARSARTDKGVSAVGQVVSGRFYI
Sbjct: 1    MQKNPGAKTIEGDLEEALFFSGAVPEQDRGHPKRFDWARSARTDKGVSAVGQVVSGRFYI 60

Query: 490  DPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRYVYLIPVFALDPNSHPDRESV 669
            DPPGL++RLNSNLP QIRIFGFKR TASFNAKKFCDRRRYVYLIPVFALDP+SHPDRESV
Sbjct: 61   DPPGLVERLNSNLPPQIRIFGFKRVTASFNAKKFCDRRRYVYLIPVFALDPSSHPDRESV 120

Query: 670  LASLGSENQLVKCLECSERGRKVFGVMGRRNSES-NIVENGVS-------IVSQIEGETE 825
            LAS+GSEN+LVKCLECSERGRKV G+MG+R  ES NIV+ G+        + S+++ E +
Sbjct: 121  LASVGSENELVKCLECSERGRKVVGIMGKRKGESKNIVQLGIPSNDEAAIVNSEVQEEIK 180

Query: 826  SGFXXXXXXXXXXXXXXILDSTVSQSEIVVEPRVSLEEEKFDENLVQCNNGEGKGSGFCY 1005
            +                 +D+  S SE + E    L  E   EN ++      KGSGFCY
Sbjct: 181  ATSNNNN-----------IDANNSISETIKEEAAKLSSE--GENKLE------KGSGFCY 221

Query: 1006 GEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGMDFVKCEV 1185
            G+KE+ERFNRIL HYVGTHNFHNFTTR KAEDPSA+R+I+SF+ N IVTVEG++FVKCEV
Sbjct: 222  GDKERERFNRILGHYVGTHNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEV 281

Query: 1186 VGQSFMLHQIRKLIGLAVSVMRNCAPESLIDTALQQDVNMNVPTAPEVGLYLDECFFTSY 1365
            VGQSFMLHQIRK+IGLAV++MRN APESL++TAL +DVN+NVPTAPEVGLYLDECFF+SY
Sbjct: 282  VGQSFMLHQIRKMIGLAVAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSSY 341

Query: 1366 NQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRAV 1545
            N+KW+D+HEE+SMK YAEEAE+FKMK +YSHIA+TEHKEG VALWLHSLNHRNYPDL  +
Sbjct: 342  NKKWRDSHEEVSMKAYAEEAEEFKMKHVYSHIAATEHKEGVVALWLHSLNHRNYPDL-CI 400

Query: 1546 EANEVHSNEENAQFDTVAE 1602
              N   S+ +N + +T+A+
Sbjct: 401  GDNGAASDGKNGEEETMAD 419


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 584

 Score =  610 bits (1574), Expect = e-172
 Identities = 324/495 (65%), Positives = 367/495 (74%), Gaps = 54/495 (10%)
 Frame = +1

Query: 250  RYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARS 429
            RYKRRK+AIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAVPE DRG PKR+D+ARS
Sbjct: 50   RYKRRKMAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGCPKRYDWARS 109

Query: 430  ARTDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRY 609
            ARTDKGVSAVGQV+SGRFY+DPPGL+DRLNS LP QIRIFG+KR TASFNAKKFCDRRRY
Sbjct: 110  ARTDKGVSAVGQVISGRFYVDPPGLVDRLNSILPSQIRIFGYKRVTASFNAKKFCDRRRY 169

Query: 610  VYLIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSES------ 771
            VYLIPVFALDP+SH DRESVLASLGS ++LVKCLECSERGRKV G +G+R+ ES      
Sbjct: 170  VYLIPVFALDPSSHRDRESVLASLGSGDELVKCLECSERGRKVIGAVGKRSFESKSEAFQ 229

Query: 772  -NIVENGVSIVSQIE--------------------------------GETESGFXXXXXX 852
             +I+ NG   ++  E                                 ETES        
Sbjct: 230  TDILLNGGCAIANCEIKEDISMSMDNAHGVRMHSEFVEQTNVSHNEDSETESAMPRTDIL 289

Query: 853  XXXXXXXXILDSTVSQSEIVVEPRVSLEEEKFDENLVQCN---------NGEG---KGSG 996
                      DS   Q E++V    +    K  E + + +         NGE    KGS 
Sbjct: 290  SNSEDGNVKSDS--KQEEVMVSEDAADGGNKESETMEKDSKASVGEERVNGEEHVMKGSE 347

Query: 997  FCYGEKEKERFNRILNHYVGTHNFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGMDFVK 1176
            FCYGE+EKE+FNRIL +YVG+HNFHNFTTRTKAEDPSA+RYI+SF+A   VTVEG++FVK
Sbjct: 348  FCYGEEEKEKFNRILKYYVGSHNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIEFVK 407

Query: 1177 CEVVGQSFMLHQIRKLIGLAVSVMRNCAPESLIDTALQQDVNMNVPTAPEVGLYLDECFF 1356
            CEV+GQSFMLHQIRK+IGLAV++MRNCAPESLI TALQ+DV +NVPTAPEVGLYLDECFF
Sbjct: 408  CEVIGQSFMLHQIRKMIGLAVAIMRNCAPESLISTALQKDVKINVPTAPEVGLYLDECFF 467

Query: 1357 TSYNQKWKDTHEEISMKDYAEEAEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDL 1536
            TSYNQKWKD HEE+ MKDY E AEDFKMK IYSHIASTE KEG V LWLHSLN+RNYPDL
Sbjct: 468  TSYNQKWKD-HEELCMKDYEEVAEDFKMKYIYSHIASTEQKEGVVGLWLHSLNYRNYPDL 526

Query: 1537 R---AVEANEVHSNE 1572
            R    ++AN   S E
Sbjct: 527  RFCYTLDANNEKSTE 541


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  610 bits (1572), Expect = e-172
 Identities = 317/465 (68%), Positives = 368/465 (79%), Gaps = 31/465 (6%)
 Frame = +1

Query: 256  KRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARSAR 435
            KRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAV E DRG P+R+D+ARSAR
Sbjct: 58   KRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSAR 117

Query: 436  TDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRYVY 615
            TDKGVSAVGQVVSGRF IDPPGL++RLNSNLP QIRIFG+KR TASFNAKKFCD+RRYVY
Sbjct: 118  TDKGVSAVGQVVSGRFCIDPPGLVERLNSNLPTQIRIFGYKRVTASFNAKKFCDQRRYVY 177

Query: 616  LIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIVEN--G 789
            L+PVFALD +SH DRESV+ASLGS N+LVKCLECSERGRKV GVMG+R  +  +  N   
Sbjct: 178  LLPVFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDEN 237

Query: 790  VSIVSQIEGETE----SGFXXXXXXXXXXXXXXILDSTV-------SQSEIVVEPRVS-- 930
             S+ SQ++ +T     +G               I +S +       S +E +VE R S  
Sbjct: 238  ASLNSQVKVDTVVSTCNGDRHNTNLESVESNKTISESVMVENANSESVNETLVESRTSET 297

Query: 931  LEEEKFDENL-------------VQCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTH 1062
            ++ E  D +L              +  NGE K   GSGFCYGE+EK+RFNRIL HYVG+H
Sbjct: 298  VQNENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSH 357

Query: 1063 NFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVS 1242
            NFHNFTTRTKAEDPSA+RYI+SF A+ +V VEG+DF+KCEVVGQSFMLHQIRK+IGLAV+
Sbjct: 358  NFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVA 417

Query: 1243 VMRNCAPESLIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEE 1422
            V+RNCAPESLI+TALQ+DVN+NVPTAPEVGLYLDEC F SYN+KWKD+HEE+SMK Y EE
Sbjct: 418  VVRNCAPESLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEE 477

Query: 1423 AEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEANE 1557
            AE+FKMK I+SHIA TE KEG VALWLHSLN+RNYPDLR +  +E
Sbjct: 478  AENFKMKHIFSHIARTEQKEGVVALWLHSLNYRNYPDLRFLGNDE 522


>ref|XP_006473737.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Citrus
            sinensis]
          Length = 526

 Score =  603 bits (1554), Expect = e-169
 Identities = 313/465 (67%), Positives = 365/465 (78%), Gaps = 31/465 (6%)
 Frame = +1

Query: 256  KRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEADRGKPKRFDFARSAR 435
            KRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEAL+ SGAV E DRG P+R+D+ARSAR
Sbjct: 58   KRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPRRYDWARSAR 117

Query: 436  TDKGVSAVGQVVSGRFYIDPPGLIDRLNSNLPYQIRIFGFKRATASFNAKKFCDRRRYVY 615
            TDKGVSAVGQVVSGRF IDPPGL++RLN NLP QIRIFG+KR TASFNAKKFCD+RRYVY
Sbjct: 118  TDKGVSAVGQVVSGRFCIDPPGLVERLNYNLPTQIRIFGYKRVTASFNAKKFCDQRRYVY 177

Query: 616  LIPVFALDPNSHPDRESVLASLGSENQLVKCLECSERGRKVFGVMGRRNSESNIVEN--G 789
            L+PVFALD +SH DRESV+ASLGS N+LVKCLECSERGRKV GVMG+R  +  +  N   
Sbjct: 178  LLPVFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQLGLPSNDEN 237

Query: 790  VSIVSQIEGETE----SGFXXXXXXXXXXXXXXILDSTV-------SQSEIVVEPRVS-- 930
             S+ SQ++ +T     +G               I +S +       S +E +VE R S  
Sbjct: 238  ASLNSQVKVDTVVSTCNGDRHNTNLESVESNKTISESAMVENANSESVNETLVESRTSET 297

Query: 931  LEEEKFDENL-------------VQCNNGEGK---GSGFCYGEKEKERFNRILNHYVGTH 1062
            ++ E  D +L              +  NGE K   GSGFCYGE+EK+RFNRIL HYVG+H
Sbjct: 298  VQNENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFNRILKHYVGSH 357

Query: 1063 NFHNFTTRTKAEDPSAKRYILSFEANVIVTVEGMDFVKCEVVGQSFMLHQIRKLIGLAVS 1242
            NFHNFTTRTKAEDPSA+RYI+SF A+ +V VEG+DF+KCEVVGQSFMLHQIRK+IGLAV+
Sbjct: 358  NFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQIRKMIGLAVA 417

Query: 1243 VMRNCAPESLIDTALQQDVNMNVPTAPEVGLYLDECFFTSYNQKWKDTHEEISMKDYAEE 1422
            V+RNCAP+SLI+TALQ+DVN+NVPTAPEVGLYLDEC F SYN+KWKD+HEE+SMK Y EE
Sbjct: 418  VVRNCAPQSLIETALQKDVNINVPTAPEVGLYLDECIFASYNKKWKDSHEELSMKAYEEE 477

Query: 1423 AEDFKMKQIYSHIASTEHKEGAVALWLHSLNHRNYPDLRAVEANE 1557
            AE+FKMK I+SHI  TE KEG VALWLHSLN+RNYPDL  +  +E
Sbjct: 478  AENFKMKHIFSHITRTEQKEGVVALWLHSLNYRNYPDLHFLGNDE 522