BLASTX nr result
ID: Akebia25_contig00022136
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Akebia25_contig00022136
(394 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006836206.1| hypothetical protein AMTR_s00101p00084550 [A... 78 1e-12
gb|ADE77339.1| unknown [Picea sitchensis] 64 2e-08
ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti... 62 1e-07
ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun... 61 1e-07
ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subun... 60 2e-07
ref|XP_003579269.1| PREDICTED: cleavage stimulation factor subun... 60 3e-07
gb|EEC69536.1| hypothetical protein OsI_38816 [Oryza sativa Indi... 59 5e-07
gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus nota... 59 9e-07
ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subun... 59 9e-07
ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subun... 59 9e-07
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat... 59 9e-07
ref|NP_001067088.1| Os12g0571900 [Oryza sativa Japonica Group] g... 58 2e-06
gb|EEE53465.1| hypothetical protein OsJ_36592 [Oryza sativa Japo... 58 2e-06
ref|XP_007010608.1| Tetratricopeptide repeat (TPR)-like superfam... 57 2e-06
ref|XP_007010606.1| Tetratricopeptide repeat-like superfamily pr... 57 2e-06
ref|XP_004165244.1| PREDICTED: cleavage stimulation factor subun... 57 2e-06
ref|XP_002303484.1| suppressor of forked family protein [Populus... 57 2e-06
ref|XP_006664657.1| PREDICTED: cleavage stimulation factor subun... 57 3e-06
ref|XP_004968633.1| PREDICTED: cleavage stimulation factor subun... 57 3e-06
ref|XP_004968632.1| PREDICTED: cleavage stimulation factor subun... 57 3e-06
>ref|XP_006836206.1| hypothetical protein AMTR_s00101p00084550 [Amborella trichopoda]
gi|548838706|gb|ERM99059.1| hypothetical protein
AMTR_s00101p00084550 [Amborella trichopoda]
Length = 790
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/61 (62%), Positives = 43/61 (70%)
Frame = -1
Query: 184 RSGAETKGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQ 5
R+ E+K KKA+D LLVD YNV +PISEA PIYEQLLSTFPTAAK+WKQ
Sbjct: 6 RNTVESKEKKAKDCLLVDKYNVEASEILANEAQHLPISEAVPIYEQLLSTFPTAAKFWKQ 65
Query: 4 Y 2
Y
Sbjct: 66 Y 66
>gb|ADE77339.1| unknown [Picea sitchensis]
Length = 157
Score = 63.9 bits (154), Expect = 2e-08
Identities = 31/55 (56%), Positives = 37/55 (67%)
Frame = -1
Query: 166 KGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
K +KAR+ +L D Y+V L P+SEATPIYEQLL+ FPTAAKYWK Y
Sbjct: 42 KERKARERILADRYDVDAWDILANEAQLRPVSEATPIYEQLLAIFPTAAKYWKLY 96
>ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
3-like [Cicer arietinum]
Length = 755
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/52 (53%), Positives = 34/52 (65%)
Frame = -1
Query: 157 KARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
+ RD + D YNV ++PI+EATPIYEQLL FPTAAK+WKQY
Sbjct: 6 RGRDKAMTDKYNVESAELLANEAQVLPIAEATPIYEQLLHLFPTAAKFWKQY 57
>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
gi|297736046|emb|CBI24084.3| unnamed protein product
[Vitis vinifera]
Length = 769
Score = 61.2 bits (147), Expect = 1e-07
Identities = 30/63 (47%), Positives = 35/63 (55%)
Frame = -1
Query: 190 EDRSGAETKGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYW 11
E S + T +VD YNV +PISEA PIYEQLL+ FPTAAKYW
Sbjct: 3 ETTSNPTSATNNNNQTAVVDKYNVETAEILANEAQHLPISEAVPIYEQLLTVFPTAAKYW 62
Query: 10 KQY 2
+QY
Sbjct: 63 RQY 65
>ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1
[Solanum tuberosum] gi|565380421|ref|XP_006356599.1|
PREDICTED: cleavage stimulation factor subunit 3-like
isoform X2 [Solanum tuberosum]
gi|565380423|ref|XP_006356600.1| PREDICTED: cleavage
stimulation factor subunit 3-like isoform X3 [Solanum
tuberosum]
Length = 741
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/46 (60%), Positives = 30/46 (65%)
Frame = -1
Query: 139 LVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
+ D YNV PISEA P+YEQLLSTFPTAAKYWKQY
Sbjct: 1 MTDKYNVEAAEILANEALRSPISEAVPLYEQLLSTFPTAAKYWKQY 46
>ref|XP_003579269.1| PREDICTED: cleavage stimulation factor subunit 3-like [Brachypodium
distachyon]
Length = 780
Score = 60.1 bits (144), Expect = 3e-07
Identities = 28/48 (58%), Positives = 34/48 (70%)
Frame = -1
Query: 145 TLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
T +D YNV ++PI+EATPIYE+LL+TFPTAAKYWKQY
Sbjct: 45 TAAMDIYNVEAAEILAKEALVLPITEATPIYEKLLATFPTAAKYWKQY 92
>gb|EEC69536.1| hypothetical protein OsI_38816 [Oryza sativa Indica Group]
Length = 879
Score = 59.3 bits (142), Expect = 5e-07
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = -1
Query: 184 RSGAETKGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQ 5
R+ A + A + +D YNV L+PI EA PIYE+LLSTFPTAAKYWKQ
Sbjct: 133 RNPAPSLAAAAAELEAMDIYNVEAAEILANEAQLLPIGEAAPIYEKLLSTFPTAAKYWKQ 192
Query: 4 Y 2
Y
Sbjct: 193 Y 193
>gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus notabilis]
Length = 782
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/64 (51%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = -1
Query: 190 EDRSGAETKGKK-ARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKY 14
ED AE+ K A + L D Y+V +PISEA PIYEQLL+ FPTAAKY
Sbjct: 5 EDCPEAESTEKSLASNEGLDDKYSVEAAEIRANEALRLPISEAAPIYEQLLTVFPTAAKY 64
Query: 13 WKQY 2
WKQY
Sbjct: 65 WKQY 68
>ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 2
[Solanum lycopersicum]
Length = 734
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/46 (60%), Positives = 29/46 (63%)
Frame = -1
Query: 139 LVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
+ D YNV PIS A PIYEQLLSTFPTAAKYWKQY
Sbjct: 1 MTDKYNVEAAEILANEALRSPISGAVPIYEQLLSTFPTAAKYWKQY 46
>ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 1
[Solanum lycopersicum]
Length = 741
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/46 (60%), Positives = 29/46 (63%)
Frame = -1
Query: 139 LVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
+ D YNV PIS A PIYEQLLSTFPTAAKYWKQY
Sbjct: 1 MTDKYNVEAAEILANEALRSPISGAVPIYEQLLSTFPTAAKYWKQY 46
>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
gi|223541464|gb|EEF43014.1| plant RNA cleavage
stimulation factor, putative [Ricinus communis]
Length = 767
Score = 58.5 bits (140), Expect = 9e-07
Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -1
Query: 193 VEDRSGAETKGKKARDTL--LVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAA 20
+E+ GA + D +VD YNV +PI++A PIYEQLLS FPTAA
Sbjct: 1 MENPDGANATKDQTTDAAAAVVDKYNVEAADVLANSAQHLPITQAAPIYEQLLSLFPTAA 60
Query: 19 KYWKQY 2
K+WKQY
Sbjct: 61 KFWKQY 66
>ref|NP_001067088.1| Os12g0571900 [Oryza sativa Japonica Group]
gi|77556873|gb|ABA99669.1| Suppressor of forked protein
containing protein, expressed [Oryza sativa Japonica
Group] gi|113649595|dbj|BAF30107.1| Os12g0571900 [Oryza
sativa Japonica Group] gi|215736851|dbj|BAG95780.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 731
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = -1
Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
+D YNV L+PI EA PIYE+LLSTFPTAAKYWKQY
Sbjct: 1 MDIYNVEAAEILANEAQLLPIGEAAPIYEKLLSTFPTAAKYWKQY 45
>gb|EEE53465.1| hypothetical protein OsJ_36592 [Oryza sativa Japonica Group]
Length = 687
Score = 57.8 bits (138), Expect = 2e-06
Identities = 28/45 (62%), Positives = 31/45 (68%)
Frame = -1
Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
+D YNV L+PI EA PIYE+LLSTFPTAAKYWKQY
Sbjct: 1 MDIYNVEAAEILANEAQLLPIGEAAPIYEKLLSTFPTAAKYWKQY 45
>ref|XP_007010608.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 3
[Theobroma cacao] gi|508727521|gb|EOY19418.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 3 [Theobroma cacao]
Length = 755
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1
Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
VD YNV +PI++A PIYEQLLS FPTAAKYW+QY
Sbjct: 4 VDKYNVESAEILANSALHLPITQAAPIYEQLLSIFPTAAKYWRQY 48
>ref|XP_007010606.1| Tetratricopeptide repeat-like superfamily protein isoform 1
[Theobroma cacao] gi|508727519|gb|EOY19416.1|
Tetratricopeptide repeat-like superfamily protein
isoform 1 [Theobroma cacao]
Length = 761
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = -1
Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
VD YNV +PI++A PIYEQLLS FPTAAKYW+QY
Sbjct: 4 VDKYNVESAEILANSALHLPITQAAPIYEQLLSIFPTAAKYWRQY 48
>ref|XP_004165244.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis
sativus]
Length = 340
Score = 57.4 bits (137), Expect = 2e-06
Identities = 30/60 (50%), Positives = 35/60 (58%)
Frame = -1
Query: 181 SGAETKGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
SG +T K D L YNV +PI EATP+YEQLL+ +PTAAKYWKQY
Sbjct: 62 SGDKTTSNKLLDGL---KYNVEVAESVANEAQRLPILEATPLYEQLLTVYPTAAKYWKQY 118
>ref|XP_002303484.1| suppressor of forked family protein [Populus trichocarpa]
gi|222840916|gb|EEE78463.1| suppressor of forked family
protein [Populus trichocarpa]
Length = 769
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = -1
Query: 193 VEDRSGAETKGKKARDTLLV-DNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAK 17
V++ + +ETK + T D YNV MPI++A PIYEQ+LS FPTA+K
Sbjct: 4 VDNGAQSETKDQATTSTTAATDPYNVEAAEILASSAQHMPIAQAAPIYEQILSLFPTASK 63
Query: 16 YWKQY 2
+WKQY
Sbjct: 64 FWKQY 68
>ref|XP_006664657.1| PREDICTED: cleavage stimulation factor subunit 3-like [Oryza
brachyantha]
Length = 734
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/45 (60%), Positives = 32/45 (71%)
Frame = -1
Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
+D YNV L+PI+EA PIYE+LL+TFPTAAKYWKQY
Sbjct: 1 MDIYNVEAAEILANEAQLLPIAEAAPIYEKLLATFPTAAKYWKQY 45
>ref|XP_004968633.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X2
[Setaria italica]
Length = 753
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = -1
Query: 133 DNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
D YNV L+PI+EA PIYE+LL+TFPTAAKYWKQY
Sbjct: 21 DIYNVQAAEILAKEALLLPINEAAPIYEKLLATFPTAAKYWKQY 64
>ref|XP_004968632.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1
[Setaria italica]
Length = 755
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = -1
Query: 133 DNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
D YNV L+PI+EA PIYE+LL+TFPTAAKYWKQY
Sbjct: 21 DIYNVQAAEILAKEALLLPINEAAPIYEKLLATFPTAAKYWKQY 64