BLASTX nr result

ID: Akebia25_contig00022136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Akebia25_contig00022136
         (394 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006836206.1| hypothetical protein AMTR_s00101p00084550 [A...    78   1e-12
gb|ADE77339.1| unknown [Picea sitchensis]                              64   2e-08
ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...    62   1e-07
ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subun...    61   1e-07
ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subun...    60   2e-07
ref|XP_003579269.1| PREDICTED: cleavage stimulation factor subun...    60   3e-07
gb|EEC69536.1| hypothetical protein OsI_38816 [Oryza sativa Indi...    59   5e-07
gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus nota...    59   9e-07
ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subun...    59   9e-07
ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subun...    59   9e-07
ref|XP_002519397.1| plant RNA cleavage stimulation factor, putat...    59   9e-07
ref|NP_001067088.1| Os12g0571900 [Oryza sativa Japonica Group] g...    58   2e-06
gb|EEE53465.1| hypothetical protein OsJ_36592 [Oryza sativa Japo...    58   2e-06
ref|XP_007010608.1| Tetratricopeptide repeat (TPR)-like superfam...    57   2e-06
ref|XP_007010606.1| Tetratricopeptide repeat-like superfamily pr...    57   2e-06
ref|XP_004165244.1| PREDICTED: cleavage stimulation factor subun...    57   2e-06
ref|XP_002303484.1| suppressor of forked family protein [Populus...    57   2e-06
ref|XP_006664657.1| PREDICTED: cleavage stimulation factor subun...    57   3e-06
ref|XP_004968633.1| PREDICTED: cleavage stimulation factor subun...    57   3e-06
ref|XP_004968632.1| PREDICTED: cleavage stimulation factor subun...    57   3e-06

>ref|XP_006836206.1| hypothetical protein AMTR_s00101p00084550 [Amborella trichopoda]
           gi|548838706|gb|ERM99059.1| hypothetical protein
           AMTR_s00101p00084550 [Amborella trichopoda]
          Length = 790

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 38/61 (62%), Positives = 43/61 (70%)
 Frame = -1

Query: 184 RSGAETKGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQ 5
           R+  E+K KKA+D LLVD YNV            +PISEA PIYEQLLSTFPTAAK+WKQ
Sbjct: 6   RNTVESKEKKAKDCLLVDKYNVEASEILANEAQHLPISEAVPIYEQLLSTFPTAAKFWKQ 65

Query: 4   Y 2
           Y
Sbjct: 66  Y 66


>gb|ADE77339.1| unknown [Picea sitchensis]
          Length = 157

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -1

Query: 166 KGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           K +KAR+ +L D Y+V           L P+SEATPIYEQLL+ FPTAAKYWK Y
Sbjct: 42  KERKARERILADRYDVDAWDILANEAQLRPVSEATPIYEQLLAIFPTAAKYWKLY 96


>ref|XP_004489637.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           3-like [Cicer arietinum]
          Length = 755

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/52 (53%), Positives = 34/52 (65%)
 Frame = -1

Query: 157 KARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           + RD  + D YNV           ++PI+EATPIYEQLL  FPTAAK+WKQY
Sbjct: 6   RGRDKAMTDKYNVESAELLANEAQVLPIAEATPIYEQLLHLFPTAAKFWKQY 57


>ref|XP_002265193.1| PREDICTED: cleavage stimulation factor subunit 3 [Vitis vinifera]
           gi|297736046|emb|CBI24084.3| unnamed protein product
           [Vitis vinifera]
          Length = 769

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/63 (47%), Positives = 35/63 (55%)
 Frame = -1

Query: 190 EDRSGAETKGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYW 11
           E  S   +       T +VD YNV            +PISEA PIYEQLL+ FPTAAKYW
Sbjct: 3   ETTSNPTSATNNNNQTAVVDKYNVETAEILANEAQHLPISEAVPIYEQLLTVFPTAAKYW 62

Query: 10  KQY 2
           +QY
Sbjct: 63  RQY 65


>ref|XP_006356598.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1
           [Solanum tuberosum] gi|565380421|ref|XP_006356599.1|
           PREDICTED: cleavage stimulation factor subunit 3-like
           isoform X2 [Solanum tuberosum]
           gi|565380423|ref|XP_006356600.1| PREDICTED: cleavage
           stimulation factor subunit 3-like isoform X3 [Solanum
           tuberosum]
          Length = 741

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 30/46 (65%)
 Frame = -1

Query: 139 LVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           + D YNV             PISEA P+YEQLLSTFPTAAKYWKQY
Sbjct: 1   MTDKYNVEAAEILANEALRSPISEAVPLYEQLLSTFPTAAKYWKQY 46


>ref|XP_003579269.1| PREDICTED: cleavage stimulation factor subunit 3-like [Brachypodium
           distachyon]
          Length = 780

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = -1

Query: 145 TLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           T  +D YNV           ++PI+EATPIYE+LL+TFPTAAKYWKQY
Sbjct: 45  TAAMDIYNVEAAEILAKEALVLPITEATPIYEKLLATFPTAAKYWKQY 92


>gb|EEC69536.1| hypothetical protein OsI_38816 [Oryza sativa Indica Group]
          Length = 879

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/61 (50%), Positives = 37/61 (60%)
 Frame = -1

Query: 184 RSGAETKGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQ 5
           R+ A +    A +   +D YNV           L+PI EA PIYE+LLSTFPTAAKYWKQ
Sbjct: 133 RNPAPSLAAAAAELEAMDIYNVEAAEILANEAQLLPIGEAAPIYEKLLSTFPTAAKYWKQ 192

Query: 4   Y 2
           Y
Sbjct: 193 Y 193


>gb|EXB59942.1| Cleavage stimulation factor subunit 3 [Morus notabilis]
          Length = 782

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 33/64 (51%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = -1

Query: 190 EDRSGAETKGKK-ARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKY 14
           ED   AE+  K  A +  L D Y+V            +PISEA PIYEQLL+ FPTAAKY
Sbjct: 5   EDCPEAESTEKSLASNEGLDDKYSVEAAEIRANEALRLPISEAAPIYEQLLTVFPTAAKY 64

Query: 13  WKQY 2
           WKQY
Sbjct: 65  WKQY 68


>ref|XP_004248746.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 2
           [Solanum lycopersicum]
          Length = 734

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/46 (60%), Positives = 29/46 (63%)
 Frame = -1

Query: 139 LVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           + D YNV             PIS A PIYEQLLSTFPTAAKYWKQY
Sbjct: 1   MTDKYNVEAAEILANEALRSPISGAVPIYEQLLSTFPTAAKYWKQY 46


>ref|XP_004248745.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform 1
           [Solanum lycopersicum]
          Length = 741

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/46 (60%), Positives = 29/46 (63%)
 Frame = -1

Query: 139 LVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           + D YNV             PIS A PIYEQLLSTFPTAAKYWKQY
Sbjct: 1   MTDKYNVEAAEILANEALRSPISGAVPIYEQLLSTFPTAAKYWKQY 46


>ref|XP_002519397.1| plant RNA cleavage stimulation factor, putative [Ricinus communis]
           gi|223541464|gb|EEF43014.1| plant RNA cleavage
           stimulation factor, putative [Ricinus communis]
          Length = 767

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/66 (45%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
 Frame = -1

Query: 193 VEDRSGAETKGKKARDTL--LVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAA 20
           +E+  GA     +  D    +VD YNV            +PI++A PIYEQLLS FPTAA
Sbjct: 1   MENPDGANATKDQTTDAAAAVVDKYNVEAADVLANSAQHLPITQAAPIYEQLLSLFPTAA 60

Query: 19  KYWKQY 2
           K+WKQY
Sbjct: 61  KFWKQY 66


>ref|NP_001067088.1| Os12g0571900 [Oryza sativa Japonica Group]
           gi|77556873|gb|ABA99669.1| Suppressor of forked protein
           containing protein, expressed [Oryza sativa Japonica
           Group] gi|113649595|dbj|BAF30107.1| Os12g0571900 [Oryza
           sativa Japonica Group] gi|215736851|dbj|BAG95780.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 731

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -1

Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           +D YNV           L+PI EA PIYE+LLSTFPTAAKYWKQY
Sbjct: 1   MDIYNVEAAEILANEAQLLPIGEAAPIYEKLLSTFPTAAKYWKQY 45


>gb|EEE53465.1| hypothetical protein OsJ_36592 [Oryza sativa Japonica Group]
          Length = 687

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/45 (62%), Positives = 31/45 (68%)
 Frame = -1

Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           +D YNV           L+PI EA PIYE+LLSTFPTAAKYWKQY
Sbjct: 1   MDIYNVEAAEILANEAQLLPIGEAAPIYEKLLSTFPTAAKYWKQY 45


>ref|XP_007010608.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 3
           [Theobroma cacao] gi|508727521|gb|EOY19418.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 3 [Theobroma cacao]
          Length = 755

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/45 (57%), Positives = 30/45 (66%)
 Frame = -1

Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           VD YNV            +PI++A PIYEQLLS FPTAAKYW+QY
Sbjct: 4   VDKYNVESAEILANSALHLPITQAAPIYEQLLSIFPTAAKYWRQY 48


>ref|XP_007010606.1| Tetratricopeptide repeat-like superfamily protein isoform 1
           [Theobroma cacao] gi|508727519|gb|EOY19416.1|
           Tetratricopeptide repeat-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 761

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/45 (57%), Positives = 30/45 (66%)
 Frame = -1

Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           VD YNV            +PI++A PIYEQLLS FPTAAKYW+QY
Sbjct: 4   VDKYNVESAEILANSALHLPITQAAPIYEQLLSIFPTAAKYWRQY 48


>ref|XP_004165244.1| PREDICTED: cleavage stimulation factor subunit 3-like [Cucumis
           sativus]
          Length = 340

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/60 (50%), Positives = 35/60 (58%)
 Frame = -1

Query: 181 SGAETKGKKARDTLLVDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           SG +T   K  D L    YNV            +PI EATP+YEQLL+ +PTAAKYWKQY
Sbjct: 62  SGDKTTSNKLLDGL---KYNVEVAESVANEAQRLPILEATPLYEQLLTVYPTAAKYWKQY 118


>ref|XP_002303484.1| suppressor of forked family protein [Populus trichocarpa]
           gi|222840916|gb|EEE78463.1| suppressor of forked family
           protein [Populus trichocarpa]
          Length = 769

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
 Frame = -1

Query: 193 VEDRSGAETKGKKARDTLLV-DNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAK 17
           V++ + +ETK +    T    D YNV            MPI++A PIYEQ+LS FPTA+K
Sbjct: 4   VDNGAQSETKDQATTSTTAATDPYNVEAAEILASSAQHMPIAQAAPIYEQILSLFPTASK 63

Query: 16  YWKQY 2
           +WKQY
Sbjct: 64  FWKQY 68


>ref|XP_006664657.1| PREDICTED: cleavage stimulation factor subunit 3-like [Oryza
           brachyantha]
          Length = 734

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/45 (60%), Positives = 32/45 (71%)
 Frame = -1

Query: 136 VDNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           +D YNV           L+PI+EA PIYE+LL+TFPTAAKYWKQY
Sbjct: 1   MDIYNVEAAEILANEAQLLPIAEAAPIYEKLLATFPTAAKYWKQY 45


>ref|XP_004968633.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X2
           [Setaria italica]
          Length = 753

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/44 (61%), Positives = 31/44 (70%)
 Frame = -1

Query: 133 DNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           D YNV           L+PI+EA PIYE+LL+TFPTAAKYWKQY
Sbjct: 21  DIYNVQAAEILAKEALLLPINEAAPIYEKLLATFPTAAKYWKQY 64


>ref|XP_004968632.1| PREDICTED: cleavage stimulation factor subunit 3-like isoform X1
           [Setaria italica]
          Length = 755

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/44 (61%), Positives = 31/44 (70%)
 Frame = -1

Query: 133 DNYNVXXXXXXXXXXXLMPISEATPIYEQLLSTFPTAAKYWKQY 2
           D YNV           L+PI+EA PIYE+LL+TFPTAAKYWKQY
Sbjct: 21  DIYNVQAAEILAKEALLLPINEAAPIYEKLLATFPTAAKYWKQY 64


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